| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is hsdM [H]
Identifier: 169823771
GI number: 169823771
Start: 91446
End: 93158
Strand: Direct
Name: hsdM [H]
Synonym: FMG_0074
Alternate gene names: 169823771
Gene position: 91446-93158 (Clockwise)
Preceding gene: 169823767
Following gene: 169823772
Centisome position: 5.09
GC content: 28.37
Gene sequence:
>1713_bases ATGACATTGCAAAAAAAAGAATATTTAGAATTAAAAAAATGGTTTGATGAAGAAGGAAAAAAAGTATTATGGGAAATGAT GAGCAATTGGAGAGGTATTATCGATAAACCACTAGATGCCTTTTATATCTTTGCACGTGCTTTTTACGACGATAAATTAT TAAATGAAAAATTAGGTAATAATAAATCAATAAAAATATTATTTTATAGAATAGACAACGAGTACCATGACTTTGTTGAA GAAGTTAGAGAAAAACTAAGTCCAAATCAAATAAAATCAATTATATTGAACTTTTATAATCTAGATAATATAAGAAGCAT CCATATGATACCTGGATTTTCAATTCCAACAGGAATTTCTGAATTATCATATAAATTACTCGATATAAAAAAAGGAGATA AATTATTTCAACCAAATTCTCAAGCTGGAGAATTTATGATAGATTTTCTAATTAATCATCCAGAATGCGATATTTCAGCA ATTGAAATTAACACAAGTTATATATTAACTTCTCAATTGAAACTTCCTATTATAGGTCACCAAAATAGAGCATCTATAAG ACAAGAAGATTACTTCAACACGGACTTATCTACATTAGAATACAATAAAGTTTTTAGCATGCCACCAATGGGAATGTTGT ATCGTGATTTTGACAAAAGAGTGAATGATAAAAACCTAATTGAATTATATAAAAAGAATGATTTCAACACGAAAAATGAA TGGACCGATATATTAAAAATAATATCCAATACAAAATTCGAAAAAGCCATATTTATAGTTCATTCTGGTATTTTGTTCAA AGAACGAGACGAAAAAATCAGAAAATATTTAATAGATAATGGATATATTGAAAGCGTCATTGAACTTGCACCTAGATTAT TCACGGGAATAGGCATATCAACTAATATTTTATTGATATCAAAAAACAACAAAAAAGTAAAAATGGTCGATGCTAGTGAA ATCTATCATAGCGATAAAATGGTTAATAAAATTACAAAAGATGATGTAGAAGTAATCTTCGACGCTTATAAAAATGAATC TACAATTTCAAAAGAAGTATCACCAGAAGAATTTGAAGACAACAACTATAGTTTTATCCCAAGAAGATACACTAATGAAG AAATAGACTTGAAAAACTATGTGTATCTAAAAGATATTACTAAAATCAAACGTGGATATGCTAATTTAAAGAAATCCGAT TTATATAAGAGAATATCCAGAGAAAATACCAATAATAAAATCATAGCCGCTGGGGACATTGATGACAACTTCAACATCGC AGATTTAACAAGCTTGACTGAAATTGAAGATAAAGAAGAAACATATTGTGTAAAAGACGGCGATATAATCTTTTCAAGAG GGGGAAGTTACAACTCACTTTTAATCAGAAATTCTGGAAATTACAGGATTCTTGTCAACGGTACACTCTACATTTTAAAT TGTGACGAACAAAAAATTGACCCGTATTATTTGCAAATGTATCTTGCAAGTGATCATTGCCTCAGCCAGATCGAATCCCT AAACACAGGCAAATCAATCCAATTCATGAGCATTAATCAGCTTGGAGAATTAAAAATTCCAAAAGTGTCAAAAGAAAAAG AGAAAGAATTGTCCCAAAAATATAAAATGATTTTAGATAAAAAAGAAATTATCAGAATACAGAAAATAAAACTTGAAGAA GATGTAAGTGAACTTGTAAGTGAGGTGATTTAG
Upstream 100 bases:
>100_bases CAATTTGGATTTTTTATACCAAACAAAATGGTTAGTGAAAACCGTTGACAAAACAAATCGCGTGGTTTACAATAACCGTA GAAGAAATAAAAAGGAGTTA
Downstream 100 bases:
>100_bases AATTGGATAGAAATCCTATAATCGCCGAAGCTATATCTAGAATTACGAGTGAACTCATAAAAGATCAAACAGACGAACAA TTCTGCATGCTTCTTGAAAA
Product: putative type I restriction-modification system methylation subunit
Products: NA
Alternate protein names: M.EcoR124II [H]
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTLQKKEYLELKKWFDEEGKKVLWEMMSNWRGIIDKPLDAFYIFARAFYDDKLLNEKLGNNKSIKILFYRIDNEYHDFVE EVREKLSPNQIKSIILNFYNLDNIRSIHMIPGFSIPTGISELSYKLLDIKKGDKLFQPNSQAGEFMIDFLINHPECDISA IEINTSYILTSQLKLPIIGHQNRASIRQEDYFNTDLSTLEYNKVFSMPPMGMLYRDFDKRVNDKNLIELYKKNDFNTKNE WTDILKIISNTKFEKAIFIVHSGILFKERDEKIRKYLIDNGYIESVIELAPRLFTGIGISTNILLISKNNKKVKMVDASE IYHSDKMVNKITKDDVEVIFDAYKNESTISKEVSPEEFEDNNYSFIPRRYTNEEIDLKNYVYLKDITKIKRGYANLKKSD LYKRISRENTNNKIIAAGDIDDNFNIADLTSLTEIEDKEETYCVKDGDIIFSRGGSYNSLLIRNSGNYRILVNGTLYILN CDEQKIDPYYLQMYLASDHCLSQIESLNTGKSIQFMSINQLGELKIPKVSKEKEKELSQKYKMILDKKEIIRIQKIKLEE DVSELVSEVI
Sequences:
>Translated_570_residues MTLQKKEYLELKKWFDEEGKKVLWEMMSNWRGIIDKPLDAFYIFARAFYDDKLLNEKLGNNKSIKILFYRIDNEYHDFVE EVREKLSPNQIKSIILNFYNLDNIRSIHMIPGFSIPTGISELSYKLLDIKKGDKLFQPNSQAGEFMIDFLINHPECDISA IEINTSYILTSQLKLPIIGHQNRASIRQEDYFNTDLSTLEYNKVFSMPPMGMLYRDFDKRVNDKNLIELYKKNDFNTKNE WTDILKIISNTKFEKAIFIVHSGILFKERDEKIRKYLIDNGYIESVIELAPRLFTGIGISTNILLISKNNKKVKMVDASE IYHSDKMVNKITKDDVEVIFDAYKNESTISKEVSPEEFEDNNYSFIPRRYTNEEIDLKNYVYLKDITKIKRGYANLKKSD LYKRISRENTNNKIIAAGDIDDNFNIADLTSLTEIEDKEETYCVKDGDIIFSRGGSYNSLLIRNSGNYRILVNGTLYILN CDEQKIDPYYLQMYLASDHCLSQIESLNTGKSIQFMSINQLGELKIPKVSKEKEKELSQKYKMILDKKEIIRIQKIKLEE DVSELVSEVI >Mature_569_residues TLQKKEYLELKKWFDEEGKKVLWEMMSNWRGIIDKPLDAFYIFARAFYDDKLLNEKLGNNKSIKILFYRIDNEYHDFVEE VREKLSPNQIKSIILNFYNLDNIRSIHMIPGFSIPTGISELSYKLLDIKKGDKLFQPNSQAGEFMIDFLINHPECDISAI EINTSYILTSQLKLPIIGHQNRASIRQEDYFNTDLSTLEYNKVFSMPPMGMLYRDFDKRVNDKNLIELYKKNDFNTKNEW TDILKIISNTKFEKAIFIVHSGILFKERDEKIRKYLIDNGYIESVIELAPRLFTGIGISTNILLISKNNKKVKMVDASEI YHSDKMVNKITKDDVEVIFDAYKNESTISKEVSPEEFEDNNYSFIPRRYTNEEIDLKNYVYLKDITKIKRGYANLKKSDL YKRISRENTNNKIIAAGDIDDNFNIADLTSLTEIEDKEETYCVKDGDIIFSRGGSYNSLLIRNSGNYRILVNGTLYILNC DEQKIDPYYLQMYLASDHCLSQIESLNTGKSIQFMSINQLGELKIPKVSKEKEKELSQKYKMILDKKEIIRIQKIKLEED VSELVSEVI
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities. The EcoR124/3 I enzyme recognizes 5'-GAAN(7)RTCG-3' [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR004546 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 66738; Mature: 66607
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQKKEYLELKKWFDEEGKKVLWEMMSNWRGIIDKPLDAFYIFARAFYDDKLLNEKLGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC NKSIKILFYRIDNEYHDFVEEVREKLSPNQIKSIILNFYNLDNIRSIHMIPGFSIPTGIS CCEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHH ELSYKLLDIKKGDKLFQPNSQAGEFMIDFLINHPECDISAIEINTSYILTSQLKLPIIGH HHHEEEEEECCCCCCCCCCCCCHHEEEEEEECCCCCCEEEEEEECEEEEEECCEEEEECC QNRASIRQEDYFNTDLSTLEYNKVFSMPPMGMLYRDFDKRVNDKNLIELYKKNDFNTKNE CCCCCCCHHHCCCCCCCCEEECCEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH WTDILKIISNTKFEKAIFIVHSGILFKERDEKIRKYLIDNGYIESVIELAPRLFTGIGIS HHHHHHHHHCCCHHEEEEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE TNILLISKNNKKVKMVDASEIYHSDKMVNKITKDDVEVIFDAYKNESTISKEVSPEEFED EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCC NNYSFIPRRYTNEEIDLKNYVYLKDITKIKRGYANLKKSDLYKRISRENTNNKIIAAGDI CCEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCC DDNFNIADLTSLTEIEDKEETYCVKDGDIIFSRGGSYNSLLIRNSGNYRILVNGTLYILN CCCCCHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCEEEEEECEEEEEE CDEQKIDPYYLQMYLASDHCLSQIESLNTGKSIQFMSINQLGELKIPKVSKEKEKELSQK CCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH YKMILDKKEIIRIQKIKLEEDVSELVSEVI HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLQKKEYLELKKWFDEEGKKVLWEMMSNWRGIIDKPLDAFYIFARAFYDDKLLNEKLGN CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC NKSIKILFYRIDNEYHDFVEEVREKLSPNQIKSIILNFYNLDNIRSIHMIPGFSIPTGIS CCEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHH ELSYKLLDIKKGDKLFQPNSQAGEFMIDFLINHPECDISAIEINTSYILTSQLKLPIIGH HHHEEEEEECCCCCCCCCCCCCHHEEEEEEECCCCCCEEEEEEECEEEEEECCEEEEECC QNRASIRQEDYFNTDLSTLEYNKVFSMPPMGMLYRDFDKRVNDKNLIELYKKNDFNTKNE CCCCCCCHHHCCCCCCCCEEECCEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH WTDILKIISNTKFEKAIFIVHSGILFKERDEKIRKYLIDNGYIESVIELAPRLFTGIGIS HHHHHHHHHCCCHHEEEEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE TNILLISKNNKKVKMVDASEIYHSDKMVNKITKDDVEVIFDAYKNESTISKEVSPEEFED EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCC NNYSFIPRRYTNEEIDLKNYVYLKDITKIKRGYANLKKSDLYKRISRENTNNKIIAAGDI CCEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCC DDNFNIADLTSLTEIEDKEETYCVKDGDIIFSRGGSYNSLLIRNSGNYRILVNGTLYILN CCCCCHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCEEEEEECEEEEEE CDEQKIDPYYLQMYLASDHCLSQIESLNTGKSIQFMSINQLGELKIPKVSKEKEKELSQK CCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH YKMILDKKEIIRIQKIKLEEDVSELVSEVI HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2784505 [H]