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The map label for this gene is cadC [H]

Identifier: 169823750

GI number: 169823750

Start: 70144

End: 70512

Strand: Direct

Name: cadC [H]

Synonym: FMG_0053

Alternate gene names: 169823750

Gene position: 70144-70512 (Clockwise)

Preceding gene: 169823748

Following gene: 169823751

Centisome position: 3.9

GC content: 38.21

Gene sequence:

>369_bases
GTGATAGATATAGATAAATTCAACGATGAAAAATGTGAAGTAACGCTAATTCACGAGGATAATGTAAAAAAAGCTATCAA
TGAGCTTCCAGATGACGAATTGATCGCCGATTTGTCCGATATGTTCAAGATTTTCGGAGATCAAACAAGGGTGAAGATTT
TGATGGCGTTGGAAAGTGGAGAGTTGTGCGTGTGCGACATTGCAGCTGTGATGGATATGAGTCAGTCTGCTATTAGTCAC
CAATTAAGGGTGTTGAAACAAAGCAACATTGTGAAGACTAGACGTCAAGGAAAAGTTGTGTATTATTCGATTTCGGATGA
TCATGTGAAAGAAATTTTCGACATTGCGATAGTACACGTGCAAGAATAA

Upstream 100 bases:

>100_bases
TTATATCAAAAAAATTTCTTTTTTTTATTGACAAACTAAAAATAAAATGATATTATCATATTAACAAATGAACAAGTATT
CATATGTTCATATAAAGGAT

Downstream 100 bases:

>100_bases
CGAGAAATAATTTAGAAAAATAAAAAAATAAAAAGGAGAAAGTTATGAAAAGAAGATACACATTAGAAAATTTGGGATGT
GCAAATTGTGCAGCAAAAAT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MIDIDKFNDEKCEVTLIHEDNVKKAINELPDDELIADLSDMFKIFGDQTRVKILMALESGELCVCDIAAVMDMSQSAISH
QLRVLKQSNIVKTRRQGKVVYYSISDDHVKEIFDIAIVHVQE

Sequences:

>Translated_122_residues
MIDIDKFNDEKCEVTLIHEDNVKKAINELPDDELIADLSDMFKIFGDQTRVKILMALESGELCVCDIAAVMDMSQSAISH
QLRVLKQSNIVKTRRQGKVVYYSISDDHVKEIFDIAIVHVQE
>Mature_122_residues
MIDIDKFNDEKCEVTLIHEDNVKKAINELPDDELIADLSDMFKIFGDQTRVKILMALESGELCVCDIAAVMDMSQSAISH
QLRVLKQSNIVKTRRQGKVVYYSISDDHVKEIFDIAIVHVQE

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789916, Length=67, Percent_Identity=46.2686567164179, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13910; Mature: 13910

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIDKFNDEKCEVTLIHEDNVKKAINELPDDELIADLSDMFKIFGDQTRVKILMALESG
CCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC
ELCVCDIAAVMDMSQSAISHQLRVLKQSNIVKTRRQGKVVYYSISDDHVKEIFDIAIVHV
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCHHHHHHHHHHEEEE
QE
CC
>Mature Secondary Structure
MIDIDKFNDEKCEVTLIHEDNVKKAINELPDDELIADLSDMFKIFGDQTRVKILMALESG
CCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC
ELCVCDIAAVMDMSQSAISHQLRVLKQSNIVKTRRQGKVVYYSISDDHVKEIFDIAIVHV
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCHHHHHHHHHHEEEE
QE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA