| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is 169823747
Identifier: 169823747
GI number: 169823747
Start: 68142
End: 69050
Strand: Direct
Name: 169823747
Synonym: FMG_0050
Alternate gene names: NA
Gene position: 68142-69050 (Clockwise)
Preceding gene: 169823746
Following gene: 169823748
Centisome position: 3.79
GC content: 35.64
Gene sequence:
>909_bases ATGATTGACGGATTTTACGATAGATATATGTATACTCCGATGCCCGAAATGCACAACGAGATGATTCCCGTAACGGTGGG CTGTTCTTATGGTAAATGTATTTATTGTGATTTGAATGTAGGGAAAAAATTCAAGGTTTTCGACATTGAAGATGTGAAGA AATATATACGAGATAGGAAAGATTTTTACGAGGACAAGAGGTTTACTCCGAAAAAGTTTACGCTTTTGGAGGGCAATGCC TTGTGTTTGAAGAATGATTATTTGACAGAGATTTTGAAAGAAATCAAAAAAAATTTTCCGAATATGAAATACGTGTCGTG TTTTTCTAGAAGTGATGATATTCTGAGAAAAACTGACAATGAATTGTTGGAGCTTAAAAATCTGGGGCTTGATCGTATAT GTGTGGGGATTGAGTCGGGAAGTGATTGGGTGCTTTCTTATCATAAAAAAGGTGTCACATCACAGGAACAATTGACTGCT CTTCACAGGCTCGATAATTTGGGAATAAAATATTCCGTCTACATTATGCTTGGTCTTGGTGGAGAAGCACATTCACGTGA ACATGTAATGAAGACTGCAGAGTTTTTGAACAAGGTGAATCCGTTTGAAATTGTTGTTGTGAATTTGGTTTTGTTCAAGA ATGCAAAATTGATAGAAAATGTGAGAAATCAAGATTTCAAAAGAGTGTCCATCAGACAGCAAATCATTGAGGAGATAATG CTTGTTCAAAATTTGAATAAAAGATGCATCTACAATGGAACTCACAAGACGAAGGCAGTGGCTGTGACATCTGTAATTCC AGATAAGAAGTATGAAATTATCGCTGTTTTGAAGCAAAGACTAGAAGATGATGACAAGGAAATGAATAAAAAAGAACGTA AAAAATGGGATAGATGGGATGAAGGTTAA
Upstream 100 bases:
>100_bases AGTGTCCGGTTTTTTTATTTGGCAAAAATGGACAGTACAAATAAATTTAAAACACATCTTGTGTTATAATACTTGTAAAA TATCAAACAAAGGTGATTAA
Downstream 100 bases:
>100_bases TGGATACGGAAAAAATCAAGAAACAAACTGGAATAAATAAGGTGATTTTCAAAAAGGAAGTCACATCGACAAATGATGAA ATTCTGAATGAAAAGCAAGA
Product: oxygen-independent coproporphyrinogen III oxidase
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Oxygen-Independent Coproporphyrinogen III Oxidase; Radical SAM Family Protein; Radical Sam Domain Protein; Coproporphyrinogen Oxidase; Elongator /MiaB/NifB; Fe-S Oxidoreductase Family Protein; Radical SAM Superfamily Lipoprotein; Oxygen-Independent Coproporphyrinogen III; Radical SAM
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MIDGFYDRYMYTPMPEMHNEMIPVTVGCSYGKCIYCDLNVGKKFKVFDIEDVKKYIRDRKDFYEDKRFTPKKFTLLEGNA LCLKNDYLTEILKEIKKNFPNMKYVSCFSRSDDILRKTDNELLELKNLGLDRICVGIESGSDWVLSYHKKGVTSQEQLTA LHRLDNLGIKYSVYIMLGLGGEAHSREHVMKTAEFLNKVNPFEIVVVNLVLFKNAKLIENVRNQDFKRVSIRQQIIEEIM LVQNLNKRCIYNGTHKTKAVAVTSVIPDKKYEIIAVLKQRLEDDDKEMNKKERKKWDRWDEG
Sequences:
>Translated_302_residues MIDGFYDRYMYTPMPEMHNEMIPVTVGCSYGKCIYCDLNVGKKFKVFDIEDVKKYIRDRKDFYEDKRFTPKKFTLLEGNA LCLKNDYLTEILKEIKKNFPNMKYVSCFSRSDDILRKTDNELLELKNLGLDRICVGIESGSDWVLSYHKKGVTSQEQLTA LHRLDNLGIKYSVYIMLGLGGEAHSREHVMKTAEFLNKVNPFEIVVVNLVLFKNAKLIENVRNQDFKRVSIRQQIIEEIM LVQNLNKRCIYNGTHKTKAVAVTSVIPDKKYEIIAVLKQRLEDDDKEMNKKERKKWDRWDEG >Mature_302_residues MIDGFYDRYMYTPMPEMHNEMIPVTVGCSYGKCIYCDLNVGKKFKVFDIEDVKKYIRDRKDFYEDKRFTPKKFTLLEGNA LCLKNDYLTEILKEIKKNFPNMKYVSCFSRSDDILRKTDNELLELKNLGLDRICVGIESGSDWVLSYHKKGVTSQEQLTA LHRLDNLGIKYSVYIMLGLGGEAHSREHVMKTAEFLNKVNPFEIVVVNLVLFKNAKLIENVRNQDFKRVSIRQQIIEEIM LVQNLNKRCIYNGTHKTKAVAVTSVIPDKKYEIIAVLKQRLEDDDKEMNKKERKKWDRWDEG
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35465; Mature: 35465
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGFYDRYMYTPMPEMHNEMIPVTVGCSYGKCIYCDLNVGKKFKVFDIEDVKKYIRDRK CCCCHHHCEEECCCHHHCCCEEEEEEECCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHH DFYEDKRFTPKKFTLLEGNALCLKNDYLTEILKEIKKNFPNMKYVSCFSRSDDILRKTDN HHHHCCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHH ELLELKNLGLDRICVGIESGSDWVLSYHKKGVTSQEQLTALHRLDNLGIKYSVYIMLGLG HHHHHHHCCCCCEEEEECCCCCCEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEECC GEAHSREHVMKTAEFLNKVNPFEIVVVNLVLFKNAKLIENVRNQDFKRVSIRQQIIEEIM CCCCHHHHHHHHHHHHHCCCCHHHHEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH LVQNLNKRCIYNGTHKTKAVAVTSVIPDKKYEIIAVLKQRLEDDDKEMNKKERKKWDRWD HHHCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC EG CC >Mature Secondary Structure MIDGFYDRYMYTPMPEMHNEMIPVTVGCSYGKCIYCDLNVGKKFKVFDIEDVKKYIRDRK CCCCHHHCEEECCCHHHCCCEEEEEEECCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHH DFYEDKRFTPKKFTLLEGNALCLKNDYLTEILKEIKKNFPNMKYVSCFSRSDDILRKTDN HHHHCCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHH ELLELKNLGLDRICVGIESGSDWVLSYHKKGVTSQEQLTALHRLDNLGIKYSVYIMLGLG HHHHHHHCCCCCEEEEECCCCCCEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEECC GEAHSREHVMKTAEFLNKVNPFEIVVVNLVLFKNAKLIENVRNQDFKRVSIRQQIIEEIM CCCCHHHHHHHHHHHHHCCCCHHHHEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH LVQNLNKRCIYNGTHKTKAVAVTSVIPDKKYEIIAVLKQRLEDDDKEMNKKERKKWDRWD HHHCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC EG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA