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The map label for this gene is pepF [H]

Identifier: 169823738

GI number: 169823738

Start: 45719

End: 47515

Strand: Direct

Name: pepF [H]

Synonym: FMG_0041

Alternate gene names: 169823738

Gene position: 45719-47515 (Clockwise)

Preceding gene: 169823737

Following gene: 169823739

Centisome position: 2.54

GC content: 38.51

Gene sequence:

>1797_bases
ATGGATATACTAAAATATTGCAAAAGAGAAGAAGCAGACCCACAATACATGTGGGATTTATCGGCACTATATAAAACAGA
AGAAGAATTCGAAAAAGCAGTGAAGACAATTGATTTGATGGCGGATGATTTCAAGAAAAATTACGAAAACAAACTCAAAT
CAGCAGACATCATTAAAAACGCAATGGACGATTACAGAGATATCGTGGCTAATATCGACCGCATCGCACACTACGCATCA
CTTGATGTGGAAGCAGACGGCCACAACGAAAAGTCCCAAAAAAGAGCCATGGCTACATTCACAAAAATCGCAGATATCGA
AAACAAAATGAGCTTTTTTGAAACAGAACTCGTACAAGTTGACGAACAAACACTTGAAGAAGTGAAAAACGACACCAACA
ATACAAGATACATCGACGATTTGTTGAAGAAAAAAGAACACATCTTATCCAAAGAAGTGGAAAATGCTATAAGCAAATTC
TCGCAAACATTTAGCTCATTCTACGAAATCTACAACACAACGAAAATTCACGACATCACATTCCCTGATTTCGAAGTAAA
TGGCAAAAAATACGAAATGACTTACAATTTGTTCGAAGGAGTTTACGACAACGACCCTGACACAGATTTGAGAAGAAAAT
CATACGAAGTGTTCTACAACGAACTTGCAAAATACAAAAACACAACAGCGATGATTTATCTGTCACATTGCCAAGCAGAA
AAGGCAGAAAGTGAACTAAGAGGATACGATTCAGTGATAGATTTCTTGTTGGACAGACAAAACATCTCTCGTGAATTGTA
CGACAGACAACTAGATGTAATCATGCAAGAACTTCCGAAACACATGAGAAAATACGCCCAAATCATCAAAAAAGAATACG
ATTTGGACCAAGTTACATTCATGGACTTGAAGCTAGATGTGGAAAACTCATTCTCTAAAAACATTTCAGTTGAAGATGCA
AGGAATTTACTAAAAGACGGTCTATCAATCCTAGGAGAAGATTATTCCAAAATGCTCGATCGTGCATTTGACGAAAAATG
GATTGATTTCGTAAACACATTCGGAAAATCAACAGGAGCATTCTGCGCATCGCCATTCTTGGCACACCCATACGTGTTGA
TATCTTGGACTGGCAAACTAACAGAAGCCATCGTATTGTCGCACGAATTGGGACATGCAGGACAATCCTACATCTCACAA
AAAACACAAAACGTGTTGGACAACGACCCATCAATGTATTTCGTGGAATCACCATCCACAACAAACGAACTCATCATGAG
CAGATACTTGTTAGAAAAAGCAACAACTGACCAAGAAAGAAGATACTTGTCGGGACAAATAATCTCTAGAACCTACTTCC
ACAACTTCGTCACACACTTCATCGAAGGATACTACCAAAGAGAAGTGTACAAACTAATCGATAAAAAAGAAGGATTCACA
GCCGATGATTTGTCAAGAATCTTCAAAGAAACACTACAAAAATTCTGGGGAGAAGACGTTGAAATCAACGAAGGATCGGA
ATTAACATGGATGAGACAACCTCACTACTACATGGGATTGTATCCATACACATACTCCGCAGGACTAACAATCGGGACAC
AAGTATCCAAAATGATTGTAGAAGAAGGAAAACCAGCAGCAGACAGATGGCTCAAAGCATTGGCATTAGGCTCTACAGAA
GATTCTGTGGGAATCGCAAAAGCTGCAGGAGTAGACATCACAACAGATAAACCACTCAAAGACACCATAGAATACATCGG
CAAAGTAATCGATGACATCGAAAAATACGACAAATAA

Upstream 100 bases:

>100_bases
ACGTGGATTTCATGGTTGGATCAAAAGACATGAGAATAGTTGGAACTACAGCAGACGGCAAAGAAATAGAAGTATTTAAG
GAAGGAAACTGGGCAATCTA

Downstream 100 bases:

>100_bases
TATAAATGGCACTGTAATGGGTGCCATTTTACATAGATAAGAGGCAACAAATGTATATACAATTTAATAATATTAAAAAA
TCATTCGACGGAAATACTGT

Product: oligoendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MDILKYCKREEADPQYMWDLSALYKTEEEFEKAVKTIDLMADDFKKNYENKLKSADIIKNAMDDYRDIVANIDRIAHYAS
LDVEADGHNEKSQKRAMATFTKIADIENKMSFFETELVQVDEQTLEEVKNDTNNTRYIDDLLKKKEHILSKEVENAISKF
SQTFSSFYEIYNTTKIHDITFPDFEVNGKKYEMTYNLFEGVYDNDPDTDLRRKSYEVFYNELAKYKNTTAMIYLSHCQAE
KAESELRGYDSVIDFLLDRQNISRELYDRQLDVIMQELPKHMRKYAQIIKKEYDLDQVTFMDLKLDVENSFSKNISVEDA
RNLLKDGLSILGEDYSKMLDRAFDEKWIDFVNTFGKSTGAFCASPFLAHPYVLISWTGKLTEAIVLSHELGHAGQSYISQ
KTQNVLDNDPSMYFVESPSTTNELIMSRYLLEKATTDQERRYLSGQIISRTYFHNFVTHFIEGYYQREVYKLIDKKEGFT
ADDLSRIFKETLQKFWGEDVEINEGSELTWMRQPHYYMGLYPYTYSAGLTIGTQVSKMIVEEGKPAADRWLKALALGSTE
DSVGIAKAAGVDITTDKPLKDTIEYIGKVIDDIEKYDK

Sequences:

>Translated_598_residues
MDILKYCKREEADPQYMWDLSALYKTEEEFEKAVKTIDLMADDFKKNYENKLKSADIIKNAMDDYRDIVANIDRIAHYAS
LDVEADGHNEKSQKRAMATFTKIADIENKMSFFETELVQVDEQTLEEVKNDTNNTRYIDDLLKKKEHILSKEVENAISKF
SQTFSSFYEIYNTTKIHDITFPDFEVNGKKYEMTYNLFEGVYDNDPDTDLRRKSYEVFYNELAKYKNTTAMIYLSHCQAE
KAESELRGYDSVIDFLLDRQNISRELYDRQLDVIMQELPKHMRKYAQIIKKEYDLDQVTFMDLKLDVENSFSKNISVEDA
RNLLKDGLSILGEDYSKMLDRAFDEKWIDFVNTFGKSTGAFCASPFLAHPYVLISWTGKLTEAIVLSHELGHAGQSYISQ
KTQNVLDNDPSMYFVESPSTTNELIMSRYLLEKATTDQERRYLSGQIISRTYFHNFVTHFIEGYYQREVYKLIDKKEGFT
ADDLSRIFKETLQKFWGEDVEINEGSELTWMRQPHYYMGLYPYTYSAGLTIGTQVSKMIVEEGKPAADRWLKALALGSTE
DSVGIAKAAGVDITTDKPLKDTIEYIGKVIDDIEKYDK
>Mature_598_residues
MDILKYCKREEADPQYMWDLSALYKTEEEFEKAVKTIDLMADDFKKNYENKLKSADIIKNAMDDYRDIVANIDRIAHYAS
LDVEADGHNEKSQKRAMATFTKIADIENKMSFFETELVQVDEQTLEEVKNDTNNTRYIDDLLKKKEHILSKEVENAISKF
SQTFSSFYEIYNTTKIHDITFPDFEVNGKKYEMTYNLFEGVYDNDPDTDLRRKSYEVFYNELAKYKNTTAMIYLSHCQAE
KAESELRGYDSVIDFLLDRQNISRELYDRQLDVIMQELPKHMRKYAQIIKKEYDLDQVTFMDLKLDVENSFSKNISVEDA
RNLLKDGLSILGEDYSKMLDRAFDEKWIDFVNTFGKSTGAFCASPFLAHPYVLISWTGKLTEAIVLSHELGHAGQSYISQ
KTQNVLDNDPSMYFVESPSTTNELIMSRYLLEKATTDQERRYLSGQIISRTYFHNFVTHFIEGYYQREVYKLIDKKEGFT
ADDLSRIFKETLQKFWGEDVEINEGSELTWMRQPHYYMGLYPYTYSAGLTIGTQVSKMIVEEGKPAADRWLKALALGSTE
DSVGIAKAAGVDITTDKPLKDTIEYIGKVIDDIEKYDK

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69595; Mature: 69595

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKYCKREEADPQYMWDLSALYKTEEEFEKAVKTIDLMADDFKKNYENKLKSADIIKN
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMDDYRDIVANIDRIAHYASLDVEADGHNEKSQKRAMATFTKIADIENKMSFFETELVQV
HHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEQTLEEVKNDTNNTRYIDDLLKKKEHILSKEVENAISKFSQTFSSFYEIYNTTKIHDIT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
FPDFEVNGKKYEMTYNLFEGVYDNDPDTDLRRKSYEVFYNELAKYKNTTAMIYLSHCQAE
CCCCEECCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH
KAESELRGYDSVIDFLLDRQNISRELYDRQLDVIMQELPKHMRKYAQIIKKEYDLDQVTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
MDLKLDVENSFSKNISVEDARNLLKDGLSILGEDYSKMLDRAFDEKWIDFVNTFGKSTGA
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FCASPFLAHPYVLISWTGKLTEAIVLSHELGHAGQSYISQKTQNVLDNDPSMYFVESPST
HHCCCHHHCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
TNELIMSRYLLEKATTDQERRYLSGQIISRTYFHNFVTHFIEGYYQREVYKLIDKKEGFT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDLSRIFKETLQKFWGEDVEINEGSELTWMRQPHYYMGLYPYTYSAGLTIGTQVSKMIV
HHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEECEEEECCCCHHHHHHHHHH
EEGKPAADRWLKALALGSTEDSVGIAKAAGVDITTDKPLKDTIEYIGKVIDDIEKYDK
HCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDILKYCKREEADPQYMWDLSALYKTEEEFEKAVKTIDLMADDFKKNYENKLKSADIIKN
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMDDYRDIVANIDRIAHYASLDVEADGHNEKSQKRAMATFTKIADIENKMSFFETELVQV
HHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEQTLEEVKNDTNNTRYIDDLLKKKEHILSKEVENAISKFSQTFSSFYEIYNTTKIHDIT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
FPDFEVNGKKYEMTYNLFEGVYDNDPDTDLRRKSYEVFYNELAKYKNTTAMIYLSHCQAE
CCCCEECCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH
KAESELRGYDSVIDFLLDRQNISRELYDRQLDVIMQELPKHMRKYAQIIKKEYDLDQVTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
MDLKLDVENSFSKNISVEDARNLLKDGLSILGEDYSKMLDRAFDEKWIDFVNTFGKSTGA
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FCASPFLAHPYVLISWTGKLTEAIVLSHELGHAGQSYISQKTQNVLDNDPSMYFVESPST
HHCCCHHHCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
TNELIMSRYLLEKATTDQERRYLSGQIISRTYFHNFVTHFIEGYYQREVYKLIDKKEGFT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDLSRIFKETLQKFWGEDVEINEGSELTWMRQPHYYMGLYPYTYSAGLTIGTQVSKMIV
HHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEECEEEECCCCHHHHHHHHHH
EEGKPAADRWLKALALGSTEDSVGIAKAAGVDITTDKPLKDTIEYIGKVIDDIEKYDK
HCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]