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The map label for this gene is ssb [H]

Identifier: 169823578

GI number: 169823578

Start: 52558

End: 52989

Strand: Reverse

Name: ssb [H]

Synonym: FMG_P0064

Alternate gene names: 169823578

Gene position: 52989-52558 (Counterclockwise)

Preceding gene: 169823579

Following gene: 169823577

Centisome position: 28.01

GC content: 34.95

Gene sequence:

>432_bases
ATGAATAATGTAGTTTTAATGGGAAGATTAACAAAAGATGTAGAACTTAGATACAACCAATCGCAAATGGCGATCGGTAG
ATTTACGGTTGCTGTTAATAGGAGATTAACTAAAGAAAAAAGACAAGAGGCAGAGGCGAACAATCAACCTACAGCTGATT
TTATTAGTTGTGTTATTTTCGGAAAACAAGCGGAGGTATTGGCACAATATGTATCTAAAGGTATGAGAGTTTTGATTAAC
GGAAGAATCCAAACAGGTTCATACGACAACAAAGAAGGTCAAAAGGTTTATACAACTGAAGTTATTGTTGAACAATTTGA
ATTTATTGATAGCAATAACCAACATAACGAGGGTGGTAAACAACAAAATAGCCCAGACGATTTTGGAATGGGTAATGCGG
TCGTAAATAACGATAGTGAAATGCCTTTTTAG

Upstream 100 bases:

>100_bases
AATATAGAAACATTAAGGCTTTAATTGACAAGTGATACAATGATTAATTATTTGTGGATTTATCACTTGTGGATATATCA
CAAAGAAAAAGGAGAAAATT

Downstream 100 bases:

>100_bases
AGAAAAATAGAGGAGTGGCGTAATGCCACTTCCTTTCTTTTTATTAAAATGTGATTTGTGTTTAATACACTTGTGGTTTG
TAGATATGTGGTAATGGTTG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNNVVLMGRLTKDVELRYNQSQMAIGRFTVAVNRRLTKEKRQEAEANNQPTADFISCVIFGKQAEVLAQYVSKGMRVLIN
GRIQTGSYDNKEGQKVYTTEVIVEQFEFIDSNNQHNEGGKQQNSPDDFGMGNAVVNNDSEMPF

Sequences:

>Translated_143_residues
MNNVVLMGRLTKDVELRYNQSQMAIGRFTVAVNRRLTKEKRQEAEANNQPTADFISCVIFGKQAEVLAQYVSKGMRVLIN
GRIQTGSYDNKEGQKVYTTEVIVEQFEFIDSNNQHNEGGKQQNSPDDFGMGNAVVNNDSEMPF
>Mature_143_residues
MNNVVLMGRLTKDVELRYNQSQMAIGRFTVAVNRRLTKEKRQEAEANNQPTADFISCVIFGKQAEVLAQYVSKGMRVLIN
GRIQTGSYDNKEGQKVYTTEVIVEQFEFIDSNNQHNEGGKQQNSPDDFGMGNAVVNNDSEMPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=103, Percent_Identity=34.9514563106796, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16142; Mature: 16142

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVVLMGRLTKDVELRYNQSQMAIGRFTVAVNRRLTKEKRQEAEANNQPTADFISCVIF
CCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
GKQAEVLAQYVSKGMRVLINGRIQTGSYDNKEGQKVYTTEVIVEQFEFIDSNNQHNEGGK
CCHHHHHHHHHHCCCEEEEECEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCC
QQNSPDDFGMGNAVVNNDSEMPF
CCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MNNVVLMGRLTKDVELRYNQSQMAIGRFTVAVNRRLTKEKRQEAEANNQPTADFISCVIF
CCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
GKQAEVLAQYVSKGMRVLINGRIQTGSYDNKEGQKVYTTEVIVEQFEFIDSNNQHNEGGK
CCHHHHHHHHHHCCCEEEEECEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCC
QQNSPDDFGMGNAVVNNDSEMPF
CCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]