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The map label for this gene is ykfG [C]

Identifier: 169823539

GI number: 169823539

Start: 20464

End: 20772

Strand: Reverse

Name: ykfG [C]

Synonym: FMG_P0025

Alternate gene names: 169823539

Gene position: 20772-20464 (Counterclockwise)

Preceding gene: 169823540

Following gene: 169823538

Centisome position: 10.98

GC content: 33.33

Gene sequence:

>309_bases
TTGTTTGATTCAAAACTAAAACTTATAGGTATTGATTTGATTTCTGTAGGTACTATTAATCAGTCTCTAGCTCATCCTAG
GGAGGTTTTCAGAAAAGCTGTTATATCAGGTGCGGCCTTCGTTATGATCGCTCATAATCACCCGTCAGGCGATACTACAC
CGTCTGCTGAAGATATAAAGGTTTATAGAAATTTATCAGAATGTTCTGAAATCCTTAATATAAAATTATTGGATAGTTTT
ATTGTTTCGTTAAAGCCAGAACAGGAAAGTGTCTTAAGTATGAGAAAATTTTTGTCTTATGATAACTAG

Upstream 100 bases:

>100_bases
GTCTACGCAGACAGAAAACAATTCTTCATCAAAATTAACAGAATTATTAATTAATTATTTTTCGTTATATAATGACGAGA
AGGAAAGATTTATTTCTTTA

Downstream 100 bases:

>100_bases
GGGGATATTATGAAACAAATAGATATGTCACAATTTGACAATATTCAACAAGAGCAAGTGAAACAAGGGCTTGAAGAAGG
ACTTGATGTAAGCTGGTATG

Product: DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MFDSKLKLIGIDLISVGTINQSLAHPREVFRKAVISGAAFVMIAHNHPSGDTTPSAEDIKVYRNLSECSEILNIKLLDSF
IVSLKPEQESVLSMRKFLSYDN

Sequences:

>Translated_102_residues
MFDSKLKLIGIDLISVGTINQSLAHPREVFRKAVISGAAFVMIAHNHPSGDTTPSAEDIKVYRNLSECSEILNIKLLDSF
IVSLKPEQESVLSMRKFLSYDN
>Mature_102_residues
MFDSKLKLIGIDLISVGTINQSLAHPREVFRKAVISGAAFVMIAHNHPSGDTTPSAEDIKVYRNLSECSEILNIKLLDSF
IVSLKPEQESVLSMRKFLSYDN

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=82, Percent_Identity=40.2439024390244, Blast_Score=72, Evalue=7e-15,
Organism=Escherichia coli, GI1788997, Length=77, Percent_Identity=40.2597402597403, Blast_Score=69, Evalue=6e-14,
Organism=Escherichia coli, GI1788312, Length=82, Percent_Identity=37.8048780487805, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 11351; Mature: 11351

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSKLKLIGIDLISVGTINQSLAHPREVFRKAVISGAAFVMIAHNHPSGDTTPSAEDIK
CCCCCEEEEEEEEEEECCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHH
VYRNLSECSEILNIKLLDSFIVSLKPEQESVLSMRKFLSYDN
HHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFDSKLKLIGIDLISVGTINQSLAHPREVFRKAVISGAAFVMIAHNHPSGDTTPSAEDIK
CCCCCEEEEEEEEEEECCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHH
VYRNLSECSEILNIKLLDSFIVSLKPEQESVLSMRKFLSYDN
HHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA