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The map label for this gene is 167625992

Identifier: 167625992

GI number: 167625992

Start: 4972041

End: 4973120

Strand: Reverse

Name: 167625992

Synonym: Shal_4087

Alternate gene names: NA

Gene position: 4973120-4972041 (Counterclockwise)

Preceding gene: 167625994

Following gene: 167625991

Centisome position: 95.14

GC content: 42.5

Gene sequence:

>1080_bases
ATGCTTTCTAAGTTTTGGAAGCGTCAGGCTCCGCAGATGGTTGGGATAGATGTGGGATCCCATGAAGTTAAAGCGATACT
GCTGAGTAAGACTGCTGATGGGTATAAAATATTAAGCCATGCTGCCGTTCCTTTGAAAAAAGGAGCCGTTAATGATCATG
AAATTCGTGATAGCGACGCCGTTGTTGACGCGTTAAAACAGATAAAGCGTGTATTACCCAAGTCTACCAAATTTGCTGCA
GTCGCTGTTTCTGGCTCAGCGGTCATGACCAAAGTTATTTATATGGATTCTGCATTAAGTGAAGAAGAGATGGAGGCTCA
AATTGAAATTGAAGCCGACAACCTTATTCCTTACTCGCTCGATGAAGTGAATATTGATTTTGAAACGTTAAGTACTAATC
GTACCGATCCCACCAAAGTAGATGTGCTATTAAGTGCTTGTCGCAGCGAAAATATCGATAGCTTAAGCGACTCACTCGAT
GCGGTAAGTCTAGAAGCTAAAGTGGTTGATGTTGAAGGTTATGCGTTAGGGCGTTCTTTTGACATTATCGCTGGCCAACT
GCCTGATGATATTAGCGACAAAGTCGTCGCGCTGGTGGATATTGGTGCCAACATCACCACATTTTCTGTTGTTGAGCACG
GTGAAACAACATTTGTACGAGAGCAAGCTTTTGGTGGTGAGCAGTTTACCCAGTCTATTTTATCTTTTTATGGTATGACC
TATGAGCAGGCTGAAAAAGCTAAGCTTGAGGGCGATCTACCGCGCAATTATGTATTTGAAGTCTTATCACCATTCCAGAC
TCAGTTATTACAACAAATCAAGAGAACACTGCAAATTTACTGCACGTCTAGTGGTCGCGATAAAGTCGATCATATTGTGT
TGTGTGGTGGTACATCTAAGCTTGAAGGTATGGCTAACCTAATGGTTAATGAGCTCGGTGTTCATACGATTATTGCCGAC
CCATTCCAAGGTTGCTTACATGCCGATGAGGCGATAAAAAATCACTTACAGCCGCAAATTAGCAAATATATGTTGGCCTG
TGGATTAGCGCTAAGGAGCTATTCAGAATGGCGAACATAA

Upstream 100 bases:

>100_bases
CAATTGTAAAATCGAGAAACATTTTGTACAAATAACTATAACGAGTTGATTTTGTGCTAATCTACTTTGGATACTATAAC
TATAAAAGTGACCTTGGACT

Downstream 100 bases:

>100_bases
ACTTATTACCTTGGCGTGAAGAGGCAAGAGAGAAGCAGAAGCGTGATTACACCGGTATTTTAGCGTTAGTCTTCTTGGTT
TCTGGTTTAGTGGTTTATCT

Product: type IV pilus assembly protein PilM

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Tfp Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Fimbrial Assembly Family Protein; Type IV Pilus Biogenesis Protein TapM; Type IV Pilus Assembly Protein ATPase PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MLSKFWKRQAPQMVGIDVGSHEVKAILLSKTADGYKILSHAAVPLKKGAVNDHEIRDSDAVVDALKQIKRVLPKSTKFAA
VAVSGSAVMTKVIYMDSALSEEEMEAQIEIEADNLIPYSLDEVNIDFETLSTNRTDPTKVDVLLSACRSENIDSLSDSLD
AVSLEAKVVDVEGYALGRSFDIIAGQLPDDISDKVVALVDIGANITTFSVVEHGETTFVREQAFGGEQFTQSILSFYGMT
YEQAEKAKLEGDLPRNYVFEVLSPFQTQLLQQIKRTLQIYCTSSGRDKVDHIVLCGGTSKLEGMANLMVNELGVHTIIAD
PFQGCLHADEAIKNHLQPQISKYMLACGLALRSYSEWRT

Sequences:

>Translated_359_residues
MLSKFWKRQAPQMVGIDVGSHEVKAILLSKTADGYKILSHAAVPLKKGAVNDHEIRDSDAVVDALKQIKRVLPKSTKFAA
VAVSGSAVMTKVIYMDSALSEEEMEAQIEIEADNLIPYSLDEVNIDFETLSTNRTDPTKVDVLLSACRSENIDSLSDSLD
AVSLEAKVVDVEGYALGRSFDIIAGQLPDDISDKVVALVDIGANITTFSVVEHGETTFVREQAFGGEQFTQSILSFYGMT
YEQAEKAKLEGDLPRNYVFEVLSPFQTQLLQQIKRTLQIYCTSSGRDKVDHIVLCGGTSKLEGMANLMVNELGVHTIIAD
PFQGCLHADEAIKNHLQPQISKYMLACGLALRSYSEWRT
>Mature_359_residues
MLSKFWKRQAPQMVGIDVGSHEVKAILLSKTADGYKILSHAAVPLKKGAVNDHEIRDSDAVVDALKQIKRVLPKSTKFAA
VAVSGSAVMTKVIYMDSALSEEEMEAQIEIEADNLIPYSLDEVNIDFETLSTNRTDPTKVDVLLSACRSENIDSLSDSLD
AVSLEAKVVDVEGYALGRSFDIIAGQLPDDISDKVVALVDIGANITTFSVVEHGETTFVREQAFGGEQFTQSILSFYGMT
YEQAEKAKLEGDLPRNYVFEVLSPFQTQLLQQIKRTLQIYCTSSGRDKVDHIVLCGGTSKLEGMANLMVNELGVHTIIAD
PFQGCLHADEAIKNHLQPQISKYMLACGLALRSYSEWRT

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39471; Mature: 39471

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKFWKRQAPQMVGIDVGSHEVKAILLSKTADGYKILSHAAVPLKKGAVNDHEIRDSDA
CCCHHHHHCCCCEEEEECCCHHEEEEEEECCCCCHHHHHHCCCCHHCCCCCCCCCCCHHH
VVDALKQIKRVLPKSTKFAAVAVSGSAVMTKVIYMDSALSEEEMEAQIEIEADNLIPYSL
HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEC
DEVNIDFETLSTNRTDPTKVDVLLSACRSENIDSLSDSLDAVSLEAKVVDVEGYALGRSF
CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCEEECCCE
DIIAGQLPDDISDKVVALVDIGANITTFSVVEHGETTFVREQAFGGEQFTQSILSFYGMT
EEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEHHHHCCHHHHHHHHHHHHCCC
YEQAEKAKLEGDLPRNYVFEVLSPFQTQLLQQIKRTLQIYCTSSGRDKVDHIVLCGGTSK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCHH
LEGMANLMVNELGVHTIIADPFQGCLHADEAIKNHLQPQISKYMLACGLALRSYSEWRT
HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSKFWKRQAPQMVGIDVGSHEVKAILLSKTADGYKILSHAAVPLKKGAVNDHEIRDSDA
CCCHHHHHCCCCEEEEECCCHHEEEEEEECCCCCHHHHHHCCCCHHCCCCCCCCCCCHHH
VVDALKQIKRVLPKSTKFAAVAVSGSAVMTKVIYMDSALSEEEMEAQIEIEADNLIPYSL
HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEC
DEVNIDFETLSTNRTDPTKVDVLLSACRSENIDSLSDSLDAVSLEAKVVDVEGYALGRSF
CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCEEECCCE
DIIAGQLPDDISDKVVALVDIGANITTFSVVEHGETTFVREQAFGGEQFTQSILSFYGMT
EEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEHHHHCCHHHHHHHHHHHHCCC
YEQAEKAKLEGDLPRNYVFEVLSPFQTQLLQQIKRTLQIYCTSSGRDKVDHIVLCGGTSK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCHH
LEGMANLMVNELGVHTIIADPFQGCLHADEAIKNHLQPQISKYMLACGLALRSYSEWRT
HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA