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The map label for this gene is 167625990

Identifier: 167625990

GI number: 167625990

Start: 4970855

End: 4971475

Strand: Reverse

Name: 167625990

Synonym: Shal_4085

Alternate gene names: NA

Gene position: 4971475-4970855 (Counterclockwise)

Preceding gene: 167625991

Following gene: 167625989

Centisome position: 95.11

GC content: 41.55

Gene sequence:

>621_bases
ATGAACCTCGACTTGAGTCAGTTTAACGATATTGATTTTGAAAACATCGGTGCTTGGCCACAGCTAGTCAAAGTTGTGTT
TGCTGCAACGTTGGCTGTGTGCGTGTTTGTTGGTGGTTACTTCCTATTTGTTTCAGATGCTCTGGATTCGCTGAATGTTG
AAGAGGCCAAAGAACAACAGTTAAAAACAGACTTTAAGTCGAAGTATCAATTGGCTGCGAATTTAAAGTTATATCGTGAA
CAACTGGCAATAATGGAAGTGCAGTTTGCTGAACTTTTAAAGATGCTACCTTCAAGAAATGAAATGCCAGGCTTGCTAGA
CGACATTACTTTCGTGGCGACAGATTCAGGGTTAAATATTAAGAGCCTAGATTGGGAATCAGAAATCGCCCGCGATTTTT
ATATCGAATTCCCTATAAAGATTGTTGTCAGTGGTGACTACCATGAGCTAGGTCATTTAGTTGGGGGGGTGGCTAAACTC
CCGCGTATCGTCAGTTTGCATGACTTTGTTATTAGACGAAATGACTCTGGCGCACTAGGTATGGATATTTTAGCAAAAAC
TTACCGCTTTAAAGAGGGCGCAGAGTTACCGGATAAAGATAAGAAGGGGGCAGCAAAATGA

Upstream 100 bases:

>100_bases
CGCAAAATGAAGAGTTGAGACAGCTGCAGCGCTTCACGTTGAGAGTGACAATCATCAATGGCGATGGTCAAAACGCCGAT
GAAATCAAAGGGGCTAGCAA

Downstream 100 bases:

>100_bases
TGAAATTGCTACCGCTTATAATGATGAGTGTTTTGCTGACGGGGTGTATCGGGGATAAAAGCGATCTTGAGTTGTTTGTT
ACAACGACTAAAACTCAGCA

Product: pilus assembly protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Type IV Pilus Assembly Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type IV Pilus Assembly Membrane Transmembrane Protein; Type 4 Fimbrial Biogenesis Protein; Pilo Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNLDLSQFNDIDFENIGAWPQLVKVVFAATLAVCVFVGGYFLFVSDALDSLNVEEAKEQQLKTDFKSKYQLAANLKLYRE
QLAIMEVQFAELLKMLPSRNEMPGLLDDITFVATDSGLNIKSLDWESEIARDFYIEFPIKIVVSGDYHELGHLVGGVAKL
PRIVSLHDFVIRRNDSGALGMDILAKTYRFKEGAELPDKDKKGAAK

Sequences:

>Translated_206_residues
MNLDLSQFNDIDFENIGAWPQLVKVVFAATLAVCVFVGGYFLFVSDALDSLNVEEAKEQQLKTDFKSKYQLAANLKLYRE
QLAIMEVQFAELLKMLPSRNEMPGLLDDITFVATDSGLNIKSLDWESEIARDFYIEFPIKIVVSGDYHELGHLVGGVAKL
PRIVSLHDFVIRRNDSGALGMDILAKTYRFKEGAELPDKDKKGAAK
>Mature_206_residues
MNLDLSQFNDIDFENIGAWPQLVKVVFAATLAVCVFVGGYFLFVSDALDSLNVEEAKEQQLKTDFKSKYQLAANLKLYRE
QLAIMEVQFAELLKMLPSRNEMPGLLDDITFVATDSGLNIKSLDWESEIARDFYIEFPIKIVVSGDYHELGHLVGGVAKL
PRIVSLHDFVIRRNDSGALGMDILAKTYRFKEGAELPDKDKKGAAK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23125; Mature: 23125

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDLSQFNDIDFENIGAWPQLVKVVFAATLAVCVFVGGYFLFVSDALDSLNVEEAKEQQ
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKTDFKSKYQLAANLKLYREQLAIMEVQFAELLKMLPSRNEMPGLLDDITFVATDSGLNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCE
KSLDWESEIARDFYIEFPIKIVVSGDYHELGHLVGGVAKLPRIVSLHDFVIRRNDSGALG
ECCCCHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH
MDILAKTYRFKEGAELPDKDKKGAAK
HHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLDLSQFNDIDFENIGAWPQLVKVVFAATLAVCVFVGGYFLFVSDALDSLNVEEAKEQQ
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKTDFKSKYQLAANLKLYREQLAIMEVQFAELLKMLPSRNEMPGLLDDITFVATDSGLNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCE
KSLDWESEIARDFYIEFPIKIVVSGDYHELGHLVGGVAKLPRIVSLHDFVIRRNDSGALG
ECCCCHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH
MDILAKTYRFKEGAELPDKDKKGAAK
HHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA