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The map label for this gene is 167625882

Identifier: 167625882

GI number: 167625882

Start: 4849078

End: 4850544

Strand: Reverse

Name: 167625882

Synonym: Shal_3977

Alternate gene names: NA

Gene position: 4850544-4849078 (Counterclockwise)

Preceding gene: 167625884

Following gene: 167625880

Centisome position: 92.8

GC content: 47.72

Gene sequence:

>1467_bases
ATGACCAGCAATCTCCTCGTCCTCGTTCCGCTGCTGCTGACACTGATTCTGGCCCTTTTGCTTCGCAGAACCTTGGTTGC
TTTGGGCGTTGGAATTGTCTCCGGTGCATTGATCTTAACGGATTTTAGTTTGACTCAATCAGTCTCATATATGGCTGATA
GGGTTTGGCTACAATTCTACCGCGATGGCCAATGGCAAGCTTGGCACTTAAATGTACTGGCGGCCATGATTCTTCTCGGG
ATGATGACCCAGTTATTAGCGCGGGGAGGAGCGGTAAAACAATTTGCCGACTGGTTATATCACAGGATAAAAAGTGGTCG
TCAGGCACGGATTGGTATTGTGCTACTGGGTTGGATAGTATTTATCGATGGCATCTTTAGCTGTTTAGCCGTGGGGCATG
TTTGTCAGCCCCTTAGCCAGAGGTACAAGGTGCCTCGTGAGCAAATTGCTTATCTGGTCGACTCGAATGCTTCCCCTTTA
TGTGCACTTCTGCCTTTCTCTAGCTGGGGACCTTATGTAATGGCCATCCTAGCGGGCATAACCTTATTACCACTAACACC
ATTAGAGTCATTTGTTGAGATCGCCAAGATGAACTTCTATGCGGTTACTATAGTGCTACTGTCTTTATTGGTAGCTTGGT
TTGGTATTGGCTTTCATTCTGATTTCGCTATCGAGCAAAACAGTGAGGAGGTAGAGGCGGGCAATCCTTGGCTATTAGGC
TTGCCTATGGCGACGCTACTTTTAGCCTCTATCAGTTTGACCTTGTACTCTGGAGCCAGTAATGCACAGGGTGATAGTTT
GGGTGATTGGATTGCCGCGGCAGATATCGGTACAGCTATGCGTAATGCCTGCTTGCTGGCAACCGTGTTGGCAATTTTTA
TACTCAAGTTAGGTGGACGCAGTTTGAGCTTATTGTTGGGCGATCTCGCTTCTGGGGTACGCAGTATCGGTTTTGCCATC
GCTATTTTGCTATTTACTTGGATGATAGGCGCGGTGATAGTCGATTTAGGTGTGGCTAAGCTACTTGCTGCTTGGGCTGA
GCAGTTTTTATCAAAAGATATGCTGGTCTCAGGCACTTTTTTACTCTGTGCAATTATGGCATTTGCTACAGGGTCAAGTT
GGGGAACGCTTGCCATTATGATCCCGATTGGCGCAGAAGTCGCATTAACGGTTGAAGCTCAACTCCTGTTACCCGCGTTA
AGCGCGGTAATGGCAGGCTCCGTATTTGGCGATCATTGCTCACCGATATCTGATACCAGTGTGATCAGTGCAACTAGCTC
AGGTTGTGCGCCCCATGACCACGTGATTACGCAACTCCCTTTTGCCATTATTGCGGCGGTCAGTTCACTGGTTGGCTTTC
AGTTGATTAATCTAGCGGTATCAGAATTTTGGGCTTGGTTAGCGGTTATTCTGGTGGCGGTATCTATGTTGGCCGCATAC
CAAAAGTTTGTTCAAGCTGAACGCTGA

Upstream 100 bases:

>100_bases
GAAGAAAAAATAGCCGATAAAATTGTTAAAAATAGTTTTTTTTTGCACTTGTTGCTAAGTCGTTAGTATTCTTCTAATTA
TTTCTTATTGAATCGTGACC

Downstream 100 bases:

>100_bases
GCTCTTGTTTAGATATTGCTTAACTGATGTTTAGACATCGCTTAGCTGCAGATAGCATAAGGCCGCCAACTCAGTGAGTT
GGCGGCCTTATTGTTTTAAC

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MTSNLLVLVPLLLTLILALLLRRTLVALGVGIVSGALILTDFSLTQSVSYMADRVWLQFYRDGQWQAWHLNVLAAMILLG
MMTQLLARGGAVKQFADWLYHRIKSGRQARIGIVLLGWIVFIDGIFSCLAVGHVCQPLSQRYKVPREQIAYLVDSNASPL
CALLPFSSWGPYVMAILAGITLLPLTPLESFVEIAKMNFYAVTIVLLSLLVAWFGIGFHSDFAIEQNSEEVEAGNPWLLG
LPMATLLLASISLTLYSGASNAQGDSLGDWIAAADIGTAMRNACLLATVLAIFILKLGGRSLSLLLGDLASGVRSIGFAI
AILLFTWMIGAVIVDLGVAKLLAAWAEQFLSKDMLVSGTFLLCAIMAFATGSSWGTLAIMIPIGAEVALTVEAQLLLPAL
SAVMAGSVFGDHCSPISDTSVISATSSGCAPHDHVITQLPFAIIAAVSSLVGFQLINLAVSEFWAWLAVILVAVSMLAAY
QKFVQAER

Sequences:

>Translated_488_residues
MTSNLLVLVPLLLTLILALLLRRTLVALGVGIVSGALILTDFSLTQSVSYMADRVWLQFYRDGQWQAWHLNVLAAMILLG
MMTQLLARGGAVKQFADWLYHRIKSGRQARIGIVLLGWIVFIDGIFSCLAVGHVCQPLSQRYKVPREQIAYLVDSNASPL
CALLPFSSWGPYVMAILAGITLLPLTPLESFVEIAKMNFYAVTIVLLSLLVAWFGIGFHSDFAIEQNSEEVEAGNPWLLG
LPMATLLLASISLTLYSGASNAQGDSLGDWIAAADIGTAMRNACLLATVLAIFILKLGGRSLSLLLGDLASGVRSIGFAI
AILLFTWMIGAVIVDLGVAKLLAAWAEQFLSKDMLVSGTFLLCAIMAFATGSSWGTLAIMIPIGAEVALTVEAQLLLPAL
SAVMAGSVFGDHCSPISDTSVISATSSGCAPHDHVITQLPFAIIAAVSSLVGFQLINLAVSEFWAWLAVILVAVSMLAAY
QKFVQAER
>Mature_487_residues
TSNLLVLVPLLLTLILALLLRRTLVALGVGIVSGALILTDFSLTQSVSYMADRVWLQFYRDGQWQAWHLNVLAAMILLGM
MTQLLARGGAVKQFADWLYHRIKSGRQARIGIVLLGWIVFIDGIFSCLAVGHVCQPLSQRYKVPREQIAYLVDSNASPLC
ALLPFSSWGPYVMAILAGITLLPLTPLESFVEIAKMNFYAVTIVLLSLLVAWFGIGFHSDFAIEQNSEEVEAGNPWLLGL
PMATLLLASISLTLYSGASNAQGDSLGDWIAAADIGTAMRNACLLATVLAIFILKLGGRSLSLLLGDLASGVRSIGFAIA
ILLFTWMIGAVIVDLGVAKLLAAWAEQFLSKDMLVSGTFLLCAIMAFATGSSWGTLAIMIPIGAEVALTVEAQLLLPALS
AVMAGSVFGDHCSPISDTSVISATSSGCAPHDHVITQLPFAIIAAVSSLVGFQLINLAVSEFWAWLAVILVAVSMLAAYQ
KFVQAER

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 52202; Mature: 52070

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNLLVLVPLLLTLILALLLRRTLVALGVGIVSGALILTDFSLTQSVSYMADRVWLQFY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDGQWQAWHLNVLAAMILLGMMTQLLARGGAVKQFADWLYHRIKSGRQARIGIVLLGWIV
HCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FIDGIFSCLAVGHVCQPLSQRYKVPREQIAYLVDSNASPLCALLPFSSWGPYVMAILAGI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHH
TLLPLTPLESFVEIAKMNFYAVTIVLLSLLVAWFGIGFHSDFAIEQNSEEVEAGNPWLLG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEH
LPMATLLLASISLTLYSGASNAQGDSLGDWIAAADIGTAMRNACLLATVLAIFILKLGGR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLSLLLGDLASGVRSIGFAIAILLFTWMIGAVIVDLGVAKLLAAWAEQFLSKDMLVSGTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLCAIMAFATGSSWGTLAIMIPIGAEVALTVEAQLLLPALSAVMAGSVFGDHCSPISDTS
HHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
VISATSSGCAPHDHVITQLPFAIIAAVSSLVGFQLINLAVSEFWAWLAVILVAVSMLAAY
CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKFVQAER
HHHHHCCC
>Mature Secondary Structure 
TSNLLVLVPLLLTLILALLLRRTLVALGVGIVSGALILTDFSLTQSVSYMADRVWLQFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDGQWQAWHLNVLAAMILLGMMTQLLARGGAVKQFADWLYHRIKSGRQARIGIVLLGWIV
HCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FIDGIFSCLAVGHVCQPLSQRYKVPREQIAYLVDSNASPLCALLPFSSWGPYVMAILAGI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHH
TLLPLTPLESFVEIAKMNFYAVTIVLLSLLVAWFGIGFHSDFAIEQNSEEVEAGNPWLLG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEH
LPMATLLLASISLTLYSGASNAQGDSLGDWIAAADIGTAMRNACLLATVLAIFILKLGGR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLSLLLGDLASGVRSIGFAIAILLFTWMIGAVIVDLGVAKLLAAWAEQFLSKDMLVSGTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLCAIMAFATGSSWGTLAIMIPIGAEVALTVEAQLLLPALSAVMAGSVFGDHCSPISDTS
HHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
VISATSSGCAPHDHVITQLPFAIIAAVSSLVGFQLINLAVSEFWAWLAVILVAVSMLAAY
CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKFVQAER
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]