| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is ilvG [H]
Identifier: 167625849
GI number: 167625849
Start: 4808626
End: 4810320
Strand: Reverse
Name: ilvG [H]
Synonym: Shal_3944
Alternate gene names: 167625849
Gene position: 4810320-4808626 (Counterclockwise)
Preceding gene: 167625850
Following gene: 167625848
Centisome position: 92.03
GC content: 51.86
Gene sequence:
>1695_bases ATGGAACAAGGGAAGATGGAGCAAGGACAAATGATAAGAGGCGCAGATGCAGTCATCAAGGCGATTGCCGCACACGGTGT AACAACGGTGTTTGGTTATCCCGGTGGGGCGATTATGCCCATCTATGATGCGCTCTATGGTAGCCCTGTCGAGCACCTGC TAAGCCGTCATGAGCAAGGCGCGGCATTTGCCGCTGTCGGCTACGCCAGAGCCAGCGGCCAAACCGGGGTTTGCTTTGCC ACTTCAGGCCCTGGTGCCACAAATCTCGTGACATCACTTGCCGACGCTCTGCTAGATTCGGTGCCAGTCGTTGCCATCAC GGGTCAAGTTTCTACCGCGGTTATTGGCACCGATGCCTTTCAAGAAATTGATGTCTTAGGTATGTCACTGTCATGCACTA AACATAGCTTTATGGTGACCCATGTCGATGAGCTTGTTCCTACTCTGTACAAAGCGTTTGAGATCGCCGCCTCTGGTCGC CCTGGTCCTGTGTTAGTCGATATCCCTAAAGATGTGCAGATCGCCATGCTTGAATACAAGACGCCACTGCAAGCGGTTAG CGTTGAACCTGAGCACACTGCCGAGCAGCTTAATGAGGCAAATCAGCTTATTGAGCAAGCTAAGCGACCAATGCTTTATG TGGGTGGGGGGGTAGGCATGGCAAGCGCTGTCGAGCAACTCGCTGATTTCATCAAGGTCACCGGGATTCCATCGGTTGCC ACCCTAAAGGGCTTAGGCGCTATCAATCCAAATACTCCCGGCTACTTGGGTATGCTCGGTATGCACGGATCTAAAGCGGC CAATTTAGCGGTACAAGAGTGTGACTTGTTGATTGTGGTGGGGGCTCGTTTTGACGATAGGGTGACCGGACGCTTAGCCA GCTTTGCTGAAAATGCCAAGGTGATCCATCTGGATATCGACGCTGCCGAGCTAGGTAAGTTACGTCTTCCTGAAGTGGCT ATTGCTGGCGATTTGCGCCAAATTCTTCCTGCACTAACTCAAAACCTAGGTGAGCAATTTGCCCCATGGCAAGCCAAGGT GGCCCAGATGAAGCATGAGCATCAATGGCGTTATGACCGTCCGAGTGAGCTTATCTACGCACCTGCAATGCTCAATCGTC TTGCGCATAAGTTGCCACAAGACAGCGTGGTGTCCTGTGATGTCGGTCAGCATCAGATGTGGGTAGCGCAGCACATGTTC TTTAATCGCCCAGAAGATCACCTGTCGAGTGCCGGGCTTGGCACTATGGGCTTTGGCTTGCCTGCGGCCATTGGCGCTAA AGTGGCGCGTCCCGATGCTATGGTAGTCGCAGTCTCGGGGGATGGCTCTTTTATGATGAATGTTCAGGAGCTGACCACCA TCAAGCGTAGGCGCCTACCCGTTAAAATCTTGCTTATCGATAACCAAAAGCTAGGCATGGTTAAGCAGTGGCAGCAGCTG TTTTTTGAAGAGCGCTACAGCGAAACCGACCTGTCTGACAACCCTGATTTCGTTAAGATGGCATCGGCATTCGATATCCC AGGACGCACTATCTCTAAGACGAGTGAAGTCGAAGCCGGACTCGATGAACTCCTCAATAGTGAAGGTCCCTTTTTACTGC ATGTGTCGATAGATGATGTCCATAACGTCTGGCCATTAGTGCCGCCAGGGGCTTCAAACCAAGAGATGATGGAAGAGATG GATAAGCAAACTTAA
Upstream 100 bases:
>100_bases GGGGGTTTTTTCGTTTAAGGGCTTAGGTGAAATAAAAGGTAAAGTAAAACTTCTATCTAAGCTCTTAATAAAAAAGTTAA TTGTAGCGGAGCGCTGATTT
Downstream 100 bases:
>100_bases GCTGCAGAAATCGGCGAGTTTGAGTCTGAATAAGAAGATTAGAAAGAGCGATAAAACGAGATGGAGAGCAAGGATATGAA TAATTACTCATTAGCGTTAA
Product: acetolactate synthase 2 catalytic subunit
Products: NA
Alternate protein names: AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit [H]
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MEQGKMEQGQMIRGADAVIKAIAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAAVGYARASGQTGVCFA TSGPGATNLVTSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDVLGMSLSCTKHSFMVTHVDELVPTLYKAFEIAASGR PGPVLVDIPKDVQIAMLEYKTPLQAVSVEPEHTAEQLNEANQLIEQAKRPMLYVGGGVGMASAVEQLADFIKVTGIPSVA TLKGLGAINPNTPGYLGMLGMHGSKAANLAVQECDLLIVVGARFDDRVTGRLASFAENAKVIHLDIDAAELGKLRLPEVA IAGDLRQILPALTQNLGEQFAPWQAKVAQMKHEHQWRYDRPSELIYAPAMLNRLAHKLPQDSVVSCDVGQHQMWVAQHMF FNRPEDHLSSAGLGTMGFGLPAAIGAKVARPDAMVVAVSGDGSFMMNVQELTTIKRRRLPVKILLIDNQKLGMVKQWQQL FFEERYSETDLSDNPDFVKMASAFDIPGRTISKTSEVEAGLDELLNSEGPFLLHVSIDDVHNVWPLVPPGASNQEMMEEM DKQT
Sequences:
>Translated_564_residues MEQGKMEQGQMIRGADAVIKAIAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAAVGYARASGQTGVCFA TSGPGATNLVTSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDVLGMSLSCTKHSFMVTHVDELVPTLYKAFEIAASGR PGPVLVDIPKDVQIAMLEYKTPLQAVSVEPEHTAEQLNEANQLIEQAKRPMLYVGGGVGMASAVEQLADFIKVTGIPSVA TLKGLGAINPNTPGYLGMLGMHGSKAANLAVQECDLLIVVGARFDDRVTGRLASFAENAKVIHLDIDAAELGKLRLPEVA IAGDLRQILPALTQNLGEQFAPWQAKVAQMKHEHQWRYDRPSELIYAPAMLNRLAHKLPQDSVVSCDVGQHQMWVAQHMF FNRPEDHLSSAGLGTMGFGLPAAIGAKVARPDAMVVAVSGDGSFMMNVQELTTIKRRRLPVKILLIDNQKLGMVKQWQQL FFEERYSETDLSDNPDFVKMASAFDIPGRTISKTSEVEAGLDELLNSEGPFLLHVSIDDVHNVWPLVPPGASNQEMMEEM DKQT >Mature_564_residues MEQGKMEQGQMIRGADAVIKAIAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAAVGYARASGQTGVCFA TSGPGATNLVTSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDVLGMSLSCTKHSFMVTHVDELVPTLYKAFEIAASGR PGPVLVDIPKDVQIAMLEYKTPLQAVSVEPEHTAEQLNEANQLIEQAKRPMLYVGGGVGMASAVEQLADFIKVTGIPSVA TLKGLGAINPNTPGYLGMLGMHGSKAANLAVQECDLLIVVGARFDDRVTGRLASFAENAKVIHLDIDAAELGKLRLPEVA IAGDLRQILPALTQNLGEQFAPWQAKVAQMKHEHQWRYDRPSELIYAPAMLNRLAHKLPQDSVVSCDVGQHQMWVAQHMF FNRPEDHLSSAGLGTMGFGLPAAIGAKVARPDAMVVAVSGDGSFMMNVQELTTIKRRRLPVKILLIDNQKLGMVKQWQQL FFEERYSETDLSDNPDFVKMASAFDIPGRTISKTSEVEAGLDELLNSEGPFLLHVSIDDVHNVWPLVPPGASNQEMMEEM DKQT
Specific function: Catalyzes the first step in the biosynthesis of branched-chain amino acids [H]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=528, Percent_Identity=26.7045454545455, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI93004078, Length=558, Percent_Identity=24.910394265233, Blast_Score=153, Evalue=4e-37, Organism=Escherichia coli, GI1790104, Length=561, Percent_Identity=45.632798573975, Blast_Score=487, Evalue=1e-139, Organism=Escherichia coli, GI87081685, Length=573, Percent_Identity=41.3612565445026, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1786717, Length=566, Percent_Identity=29.5053003533569, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1787096, Length=538, Percent_Identity=28.4386617100372, Blast_Score=186, Evalue=4e-48, Organism=Escherichia coli, GI1788716, Length=553, Percent_Identity=26.0397830018083, Blast_Score=155, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17531299, Length=562, Percent_Identity=26.3345195729537, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17531301, Length=562, Percent_Identity=26.3345195729537, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17542570, Length=531, Percent_Identity=25.6120527306968, Blast_Score=136, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6323755, Length=592, Percent_Identity=42.5675675675676, Blast_Score=453, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6320816, Length=475, Percent_Identity=23.3684210526316, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321524, Length=478, Percent_Identity=24.0585774058577, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6323163, Length=479, Percent_Identity=23.7995824634656, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6320123, Length=501, Percent_Identity=21.7564870259481, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323073, Length=480, Percent_Identity=24.1666666666667, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI19922626, Length=504, Percent_Identity=25.9920634920635, Blast_Score=164, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 60786; Mature: 60786
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQGKMEQGQMIRGADAVIKAIAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQG CCCCCCCCCCEECHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCC AAFAAVGYARASGQTGVCFATSGPGATNLVTSLADALLDSVPVVAITGQVSTAVIGTDAF CEEEEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHH QEIDVLGMSLSCTKHSFMVTHVDELVPTLYKAFEIAASGRPGPVLVDIPKDVQIAMLEYK HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECC TPLQAVSVEPEHTAEQLNEANQLIEQAKRPMLYVGGGVGMASAVEQLADFIKVTGIPSVA CCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHH TLKGLGAINPNTPGYLGMLGMHGSKAANLAVQECDLLIVVGARFDDRVTGRLASFAENAK HHHCCCCCCCCCCCCEEEECCCCCCHHHEEHCCCCEEEEECCCCCCHHHHHHHHHHCCCE VIHLDIDAAELGKLRLPEVAIAGDLRQILPALTQNLGEQFAPWQAKVAQMKHEHQWRYDR EEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC PSELIYAPAMLNRLAHKLPQDSVVSCDVGQHQMWVAQHMFFNRPEDHLSSAGLGTMGFGL CCCEEEHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC PAAIGAKVARPDAMVVAVSGDGSFMMNVQELTTIKRRRLPVKILLIDNQKLGMVKQWQQL HHHHCCHHCCCCEEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH FFEERYSETDLSDNPDFVKMASAFDIPGRTISKTSEVEAGLDELLNSEGPFLLHVSIDDV HHHHHCCCCCCCCCCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH HNVWPLVPPGASNQEMMEEMDKQT HCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MEQGKMEQGQMIRGADAVIKAIAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQG CCCCCCCCCCEECHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCC AAFAAVGYARASGQTGVCFATSGPGATNLVTSLADALLDSVPVVAITGQVSTAVIGTDAF CEEEEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHH QEIDVLGMSLSCTKHSFMVTHVDELVPTLYKAFEIAASGRPGPVLVDIPKDVQIAMLEYK HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECC TPLQAVSVEPEHTAEQLNEANQLIEQAKRPMLYVGGGVGMASAVEQLADFIKVTGIPSVA CCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHH TLKGLGAINPNTPGYLGMLGMHGSKAANLAVQECDLLIVVGARFDDRVTGRLASFAENAK HHHCCCCCCCCCCCCEEEECCCCCCHHHEEHCCCCEEEEECCCCCCHHHHHHHHHHCCCE VIHLDIDAAELGKLRLPEVAIAGDLRQILPALTQNLGEQFAPWQAKVAQMKHEHQWRYDR EEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC PSELIYAPAMLNRLAHKLPQDSVVSCDVGQHQMWVAQHMFFNRPEDHLSSAGLGTMGFGL CCCEEEHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC PAAIGAKVARPDAMVVAVSGDGSFMMNVQELTTIKRRRLPVKILLIDNQKLGMVKQWQQL HHHHCCHHCCCCEEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH FFEERYSETDLSDNPDFVKMASAFDIPGRTISKTSEVEAGLDELLNSEGPFLLHVSIDDV HHHHHCCCCCCCCCCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH HNVWPLVPPGASNQEMMEEMDKQT HCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3550695; 1379743; 9278503; 1995430; 6154938; 7015336; 3897211 [H]