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The map label for this gene is pucG [H]

Identifier: 167625844

GI number: 167625844

Start: 4801943

End: 4803079

Strand: Reverse

Name: pucG [H]

Synonym: Shal_3939

Alternate gene names: 167625844

Gene position: 4803079-4801943 (Counterclockwise)

Preceding gene: 167625845

Following gene: 167625835

Centisome position: 91.89

GC content: 51.01

Gene sequence:

>1137_bases
ATGTTACCTGCACCCTTTTTCGAGCCTTTTAGCCCACCTCGCCGAATCCTCATGGGACCCGGTCCTTCCGATGTGTATCC
AGAGGTACTGGCTGCTCAATCTAAGCCAACCATAGGCCACTTAGACCCGCTATTTGTCGAGATGATGGATGAGCTAAAAG
CACTTATCCAGTACGCTTTTCAGACCACAAATGAGATGACCATGGCGGTTTCTGCTCCGGGTAGCGCCGGCATGGAGACT
TGCTTTGTGAACCTGGTTGAGCCCGGTGAAAAGGTGATCGTTTGCCGTAATGGTGTATTTGGTGAGCGTATGCGCCAGAA
CGTCGAGCGTGTCGGCGGAGTGGCTGTAGTGGTTGATAATGAGTGGGGCGAGGCGGTAGATCCCGATCAAGTTGCTAGTG
CATTGGCGGCAAATCCTGATGCGAAGTTCTTGGCCTTTGTCCATGCAGAGACTTCAACGGGGGCATTATCAGATGCTAAA
GCCTTATGTGCACTCGCAAAACAGCATGATTGCTTATCAATCGTCGATGCGGTTACCTCTTTAGGCGGCGTGGAGCTGCT
TGTTGATGAGTGGGGCATCGATGCCATCTATTCAGGCTCTCAGAAGTGTTTATCTTGTGTGCCGGGCTTATCGCCGGTGT
CATTTTCTCCGGCGGCAGTTGCCAAACTAAAGGCGCGCAAGACGCCGGTACAAAGCTGGTTTCTCGATCAAACCTTGGTG
ATGGGCTATTGGGATGCGTCTAGCGATGGCAAACGCAGCTACCACCATACCGCCCCGGTAAATGCACTGTATGCATTGCA
TGAATCGCTACGCTTGTTAGCGGCTGAAGGGTTAGAGCTTGCATGGCAACGTCATGCTGATATGCACCAAGTGTTACGTC
ATGGCTTAGAGCGTTTAGGGCTTAAGTTTGTGGTGGCTGAAGAGTGTCGTTTACCGCAGCTGAATGCGGTTTATATTCCA
GATGGCATCGATGACGCTAAGGTAAGAAAACAGCTTTTAGAGAACTATAATCTAGAGATTGGTGCTGGCCTTGGTGCTTT
AGCGGGTAAAGCTTGGCGCATTGGTCTGATGGGCTTCGGGGCAAGGCGTGAAAACGTAGCCTTGTGCCTTAAAGCCTTAG
AAGAGGTACTCGTTTAA

Upstream 100 bases:

>100_bases
CAGACTAACACCTAGGGGCTTGACGATATTTATCGTTGTAGCAGTGTGGCAGTCGTCAAACCTTAACCTTTTAAAAGCCT
GTAGTTTTAGAGGAAATATC

Downstream 100 bases:

>100_bases
ACGAGACCCTTGTTTATTCATTAACAAGGCCGCTGATTTCAGCGGCCTTGTTGTTTGTGAGCTTTAGCTGAAAAGCGATT
AACTTAGAAAGTGTAATCGA

Product: Serine--pyruvate transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MLPAPFFEPFSPPRRILMGPGPSDVYPEVLAAQSKPTIGHLDPLFVEMMDELKALIQYAFQTTNEMTMAVSAPGSAGMET
CFVNLVEPGEKVIVCRNGVFGERMRQNVERVGGVAVVVDNEWGEAVDPDQVASALAANPDAKFLAFVHAETSTGALSDAK
ALCALAKQHDCLSIVDAVTSLGGVELLVDEWGIDAIYSGSQKCLSCVPGLSPVSFSPAAVAKLKARKTPVQSWFLDQTLV
MGYWDASSDGKRSYHHTAPVNALYALHESLRLLAAEGLELAWQRHADMHQVLRHGLERLGLKFVVAEECRLPQLNAVYIP
DGIDDAKVRKQLLENYNLEIGAGLGALAGKAWRIGLMGFGARRENVALCLKALEEVLV

Sequences:

>Translated_378_residues
MLPAPFFEPFSPPRRILMGPGPSDVYPEVLAAQSKPTIGHLDPLFVEMMDELKALIQYAFQTTNEMTMAVSAPGSAGMET
CFVNLVEPGEKVIVCRNGVFGERMRQNVERVGGVAVVVDNEWGEAVDPDQVASALAANPDAKFLAFVHAETSTGALSDAK
ALCALAKQHDCLSIVDAVTSLGGVELLVDEWGIDAIYSGSQKCLSCVPGLSPVSFSPAAVAKLKARKTPVQSWFLDQTLV
MGYWDASSDGKRSYHHTAPVNALYALHESLRLLAAEGLELAWQRHADMHQVLRHGLERLGLKFVVAEECRLPQLNAVYIP
DGIDDAKVRKQLLENYNLEIGAGLGALAGKAWRIGLMGFGARRENVALCLKALEEVLV
>Mature_378_residues
MLPAPFFEPFSPPRRILMGPGPSDVYPEVLAAQSKPTIGHLDPLFVEMMDELKALIQYAFQTTNEMTMAVSAPGSAGMET
CFVNLVEPGEKVIVCRNGVFGERMRQNVERVGGVAVVVDNEWGEAVDPDQVASALAANPDAKFLAFVHAETSTGALSDAK
ALCALAKQHDCLSIVDAVTSLGGVELLVDEWGIDAIYSGSQKCLSCVPGLSPVSFSPAAVAKLKARKTPVQSWFLDQTLV
MGYWDASSDGKRSYHHTAPVNALYALHESLRLLAAEGLELAWQRHADMHQVLRHGLERLGLKFVVAEECRLPQLNAVYIP
DGIDDAKVRKQLLENYNLEIGAGLGALAGKAWRIGLMGFGARRENVALCLKALEEVLV

Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=376, Percent_Identity=38.563829787234, Blast_Score=262, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI17536281, Length=377, Percent_Identity=36.8700265251989, Blast_Score=252, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6321079, Length=372, Percent_Identity=27.9569892473118, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI17530823, Length=378, Percent_Identity=38.8888888888889, Blast_Score=266, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR020578
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 40895; Mature: 40895

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPAPFFEPFSPPRRILMGPGPSDVYPEVLAAQSKPTIGHLDPLFVEMMDELKALIQYAF
CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QTTNEMTMAVSAPGSAGMETCFVNLVEPGEKVIVCRNGVFGERMRQNVERVGGVAVVVDN
HCCCCEEEEEECCCCCCHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEC
EWGEAVDPDQVASALAANPDAKFLAFVHAETSTGALSDAKALCALAKQHDCLSIVDAVTS
CCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
LGGVELLVDEWGIDAIYSGSQKCLSCVPGLSPVSFSPAAVAKLKARKTPVQSWFLDQTLV
CCCEEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCEEE
MGYWDASSDGKRSYHHTAPVNALYALHESLRLLAAEGLELAWQRHADMHQVLRHGLERLG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCC
LKFVVAEECRLPQLNAVYIPDGIDDAKVRKQLLENYNLEIGAGLGALAGKAWRIGLMGFG
EEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEEEECCHHHHCCCCEEEEEEECC
ARRENVALCLKALEEVLV
CCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLPAPFFEPFSPPRRILMGPGPSDVYPEVLAAQSKPTIGHLDPLFVEMMDELKALIQYAF
CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QTTNEMTMAVSAPGSAGMETCFVNLVEPGEKVIVCRNGVFGERMRQNVERVGGVAVVVDN
HCCCCEEEEEECCCCCCHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEC
EWGEAVDPDQVASALAANPDAKFLAFVHAETSTGALSDAKALCALAKQHDCLSIVDAVTS
CCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
LGGVELLVDEWGIDAIYSGSQKCLSCVPGLSPVSFSPAAVAKLKARKTPVQSWFLDQTLV
CCCEEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCEEE
MGYWDASSDGKRSYHHTAPVNALYALHESLRLLAAEGLELAWQRHADMHQVLRHGLERLG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCC
LKFVVAEECRLPQLNAVYIPDGIDDAKVRKQLLENYNLEIGAGLGALAGKAWRIGLMGFG
EEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEEEECCHHHHCCCCEEEEEEECC
ARRENVALCLKALEEVLV
CCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136 [H]