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The map label for this gene is glnA [H]

Identifier: 167625780

GI number: 167625780

Start: 4698815

End: 4700182

Strand: Reverse

Name: glnA [H]

Synonym: Shal_3875

Alternate gene names: 167625780

Gene position: 4700182-4698815 (Counterclockwise)

Preceding gene: 167625781

Following gene: 167625779

Centisome position: 89.92

GC content: 49.71

Gene sequence:

>1368_bases
ATGCAAGCGAGACAGGTTAATAGCATAAGCGATGCCATCGCTATCGTCGAAGAGCGTGGATTAAGCCACGTTAAAGTAGG
CCTATTTGACAATGATGGCATCATGCGCGGCAAGTATATGTCCAAATTGAAGTTTTTTGCTTCGCTAGAGAAGGGTTTTT
CCTTTTGCGATGTGGTGTTGGGCTGGGATGTTAAAGATCAGCTCTATGATAATGCCCGCTATACGGGCTGGCACACAGGT
TACCCCGATGCTCCCGTGAGGATCTTGCCCCACACCTGTCGCGAGGTAATAGGTGAAGAGGGGATGCTACTATTTATCGC
CGAATTTGCCGAAGAGGCTGAAGCGATTTGTCCCCGTGGCACCTTAAGGCGAGTGATTGAAAAAGCCGAACAGATGGGCT
TTAACGCCTTTGCCGCGCTCGAATATGAGTTCTTCCTATTTAATGAAACGCCTCACTCTATTCGTGAAAAAAACTACCGC
AACTTAGAGACCATTACACCCGACTGGTTTGGTTATTCGATGATCCGAAATTCGGTACACGCCGATTTATATCAAGCAAT
TTTAGCCATGTCTGAGTTAATGGATTTTCCAATCGAAGGGATCCACTCTGAGACTGGCCCGGGCGTGATTGAAGCGGCTA
TTGCGGTTGATTGTGCGGAAGCGGCGGCAGATAAAGGTGCATTGTTTAAGACCTTTATGAAGGTGTTGGCACAGCAACGT
GACTTAATAGCGACGTTTATGGCGAAGTGGTCGGCTGATTATCCGGGGCAGAGTGGCCATATACACCTATCTTTGCAAAA
CAAAGATGGCAGCTCCGCCTTTTTCGACCCCAGTAAGCTCCATAATATGAGTCAAATCCAGCGCCATTTCATTGCCGGTC
AGCAACAATTGATGCCAGAGTTTCTGTGTATGATAGCGCCAACCATCAATAGTTATTCTCGCATGATCCCAGGGTTCTGG
GCTCCCACCGATGCCACCTGGGGAGTTGAAAACAGAACGACTGCACTGAGAGTGATCCCGGGGACGGCTCAATCTCAGCG
GGTGGAGTATCGTCTAGGCGCTGCCGATGCCAACCCTTACTTAGCACTCGCGGCTGCTTTGGCCAGCGGCTTATACGGCA
TCGAGCATCAATTAACACCTCAAGCTCAGGTCAAAGGGAATGCCTATGAACAAACCCATGACGAATCGCTCGCGCTGCCT
TGCACCCTATGGGACGCTGCGCAGCGTTTTAGGGGCTCAAAAGCGGCGAAGCAGTGTTTCGGAGAGCCGTTTGTGGAGCA
CTTTGCCATCAGCCGAGAATGGGAAGAACGGGAGTTTAGAAAGCATGTCAGCGATTGGGAGATGCAGCGTTACTTCGAAA
TTATCTAA

Upstream 100 bases:

>100_bases
AATAACTGATTACTTCTACAAGATAAAACGGATGCCTGAGAGTGACCTCAGCCCTTGAGATTGACTCATACTCTCGAGGT
AAAAAATAGGGAAGCAAAAC

Downstream 100 bases:

>100_bases
TTCGATTTAATCTGCTAGCTAACGCAGATGATATAGCAAGGAGTGGCGTTATTTATGGAATTCTCACAGCAAGATACCAT
ATCACCCATCGATGGCCGAG

Product: glutamine synthetase catalytic subunit

Products: NA

Alternate protein names: Glutamate--ammonia ligase [H]

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MQARQVNSISDAIAIVEERGLSHVKVGLFDNDGIMRGKYMSKLKFFASLEKGFSFCDVVLGWDVKDQLYDNARYTGWHTG
YPDAPVRILPHTCREVIGEEGMLLFIAEFAEEAEAICPRGTLRRVIEKAEQMGFNAFAALEYEFFLFNETPHSIREKNYR
NLETITPDWFGYSMIRNSVHADLYQAILAMSELMDFPIEGIHSETGPGVIEAAIAVDCAEAAADKGALFKTFMKVLAQQR
DLIATFMAKWSADYPGQSGHIHLSLQNKDGSSAFFDPSKLHNMSQIQRHFIAGQQQLMPEFLCMIAPTINSYSRMIPGFW
APTDATWGVENRTTALRVIPGTAQSQRVEYRLGAADANPYLALAAALASGLYGIEHQLTPQAQVKGNAYEQTHDESLALP
CTLWDAAQRFRGSKAAKQCFGEPFVEHFAISREWEEREFRKHVSDWEMQRYFEII

Sequences:

>Translated_455_residues
MQARQVNSISDAIAIVEERGLSHVKVGLFDNDGIMRGKYMSKLKFFASLEKGFSFCDVVLGWDVKDQLYDNARYTGWHTG
YPDAPVRILPHTCREVIGEEGMLLFIAEFAEEAEAICPRGTLRRVIEKAEQMGFNAFAALEYEFFLFNETPHSIREKNYR
NLETITPDWFGYSMIRNSVHADLYQAILAMSELMDFPIEGIHSETGPGVIEAAIAVDCAEAAADKGALFKTFMKVLAQQR
DLIATFMAKWSADYPGQSGHIHLSLQNKDGSSAFFDPSKLHNMSQIQRHFIAGQQQLMPEFLCMIAPTINSYSRMIPGFW
APTDATWGVENRTTALRVIPGTAQSQRVEYRLGAADANPYLALAAALASGLYGIEHQLTPQAQVKGNAYEQTHDESLALP
CTLWDAAQRFRGSKAAKQCFGEPFVEHFAISREWEEREFRKHVSDWEMQRYFEII
>Mature_455_residues
MQARQVNSISDAIAIVEERGLSHVKVGLFDNDGIMRGKYMSKLKFFASLEKGFSFCDVVLGWDVKDQLYDNARYTGWHTG
YPDAPVRILPHTCREVIGEEGMLLFIAEFAEEAEAICPRGTLRRVIEKAEQMGFNAFAALEYEFFLFNETPHSIREKNYR
NLETITPDWFGYSMIRNSVHADLYQAILAMSELMDFPIEGIHSETGPGVIEAAIAVDCAEAAADKGALFKTFMKVLAQQR
DLIATFMAKWSADYPGQSGHIHLSLQNKDGSSAFFDPSKLHNMSQIQRHFIAGQQQLMPEFLCMIAPTINSYSRMIPGFW
APTDATWGVENRTTALRVIPGTAQSQRVEYRLGAADANPYLALAAALASGLYGIEHQLTPQAQVKGNAYEQTHDESLALP
CTLWDAAQRFRGSKAAKQCFGEPFVEHFAISREWEEREFRKHVSDWEMQRYFEII

Specific function: Unknown

COG id: COG0174

COG function: function code E; Glutamine synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine synthetase family [H]

Homologues:

Organism=Homo sapiens, GI221307485, Length=331, Percent_Identity=24.1691842900302, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI87081870, Length=442, Percent_Identity=30.9954751131222, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI1790301, Length=281, Percent_Identity=25.9786476868327, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008147
- InterPro:   IPR014746
- InterPro:   IPR008146
- InterPro:   IPR004809 [H]

Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]

EC number: =6.3.1.2 [H]

Molecular weight: Translated: 51359; Mature: 51359

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARQVNSISDAIAIVEERGLSHVKVGLFDNDGIMRGKYMSKLKFFASLEKGFSFCDVVL
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHC
GWDVKDQLYDNARYTGWHTGYPDAPVRILPHTCREVIGEEGMLLFIAEFAEEAEAICPRG
CCCHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHHCCCCEEEHHHHHHHHHHHHCCCH
TLRRVIEKAEQMGFNAFAALEYEFFLFNETPHSIREKNYRNLETITPDWFGYSMIRNSVH
HHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
ADLYQAILAMSELMDFPIEGIHSETGPGVIEAAIAVDCAEAAADKGALFKTFMKVLAQQR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DLIATFMAKWSADYPGQSGHIHLSLQNKDGSSAFFDPSKLHNMSQIQRHFIAGQQQLMPE
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
FLCMIAPTINSYSRMIPGFWAPTDATWGVENRTTALRVIPGTAQSQRVEYRLGAADANPY
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHH
LALAAALASGLYGIEHQLTPQAQVKGNAYEQTHDESLALPCTLWDAAQRFRGSKAAKQCF
HHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHCCCCCEEECCHHHHHHHHHCCCHHHHHHH
GEPFVEHFAISREWEEREFRKHVSDWEMQRYFEII
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQARQVNSISDAIAIVEERGLSHVKVGLFDNDGIMRGKYMSKLKFFASLEKGFSFCDVVL
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHC
GWDVKDQLYDNARYTGWHTGYPDAPVRILPHTCREVIGEEGMLLFIAEFAEEAEAICPRG
CCCHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHHCCCCEEEHHHHHHHHHHHHCCCH
TLRRVIEKAEQMGFNAFAALEYEFFLFNETPHSIREKNYRNLETITPDWFGYSMIRNSVH
HHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
ADLYQAILAMSELMDFPIEGIHSETGPGVIEAAIAVDCAEAAADKGALFKTFMKVLAQQR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DLIATFMAKWSADYPGQSGHIHLSLQNKDGSSAFFDPSKLHNMSQIQRHFIAGQQQLMPE
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
FLCMIAPTINSYSRMIPGFWAPTDATWGVENRTTALRVIPGTAQSQRVEYRLGAADANPY
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHH
LALAAALASGLYGIEHQLTPQAQVKGNAYEQTHDESLALPCTLWDAAQRFRGSKAAKQCF
HHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHCCCCCEEECCHHHHHHHHHCCCHHHHHHH
GEPFVEHFAISREWEEREFRKHVSDWEMQRYFEII
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1359838 [H]