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The map label for this gene is yhdE [C]

Identifier: 167625741

GI number: 167625741

Start: 4656737

End: 4657345

Strand: Reverse

Name: yhdE [C]

Synonym: Shal_3836

Alternate gene names: 167625741

Gene position: 4657345-4656737 (Counterclockwise)

Preceding gene: 167625742

Following gene: 167625740

Centisome position: 89.1

GC content: 47.13

Gene sequence:

>609_bases
ATGAAGTTAGTACTTGCTTCGGGCTCGCCTCGTCGTAAAGAGTTATTGGGCCAGTTAGCTTTTTTAAACACTAACAGTGC
TGCCCCATTTGAATTTGAGATTTTAGCGGCCGATATCGATGAAAGTCATCAAGCAGGTGAGTCTGCTGAAGCGTTTGTAT
TACGACTTGCCGAAGAGAAAGCGCTAGCTGGGTTAGCCCTATATGGCGTGGAAAGTGGCGCGAATAAGCAAGCCGTGGTT
CTTGGTTCTGACACCATCGTTGTGCAGGGTGAGACCATTTTAGGCAAACCAAAGGATGAAGCCGATGCGGCGCTAATATT
GGCGAGTCTTTCAGGGTTACAGCATCAAGTGATGACGGCCGTAGCGTTAACCGATGGCATTAAGACAGTGAGTCGCTTGG
TTAAAACCAAGGTGCAGTTTTGTCAGTTATCTGAGGCTGATATTTTAGCTTATATCGCAACGGGTGAGCCGATGGATAAA
GCGGGTGCCTATGGGATCCAAGGATTGGGTGGAAGTTTTGTTGAAGCTATCGAGGGAAGTTATTCTGCGGTAGTCGGGTT
ACCTTTGGTAGAAACCCGTGCGTTATTGTGTGAGATGCAAGTTTTATAG

Upstream 100 bases:

>100_bases
AAGGTTCGATAGTCACTGTTTATTTGTTTTTCTTGGCTTATGGAATTAGCGTCATTTCCGTTCTTGTTAGCCTAGTTAGA
ATCATAGAAGGGTACTGTGT

Downstream 100 bases:

>100_bases
TCATAAAGAACAGTAATAAATAGGCCTTAATTGCCAAGCTATAAAACATCATTCTTTGCAGACTTTAGCTCGCTAACCGG
TATTTAATCCCCGCTTAGCG

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKLVLASGSPRRKELLGQLAFLNTNSAAPFEFEILAADIDESHQAGESAEAFVLRLAEEKALAGLALYGVESGANKQAVV
LGSDTIVVQGETILGKPKDEADAALILASLSGLQHQVMTAVALTDGIKTVSRLVKTKVQFCQLSEADILAYIATGEPMDK
AGAYGIQGLGGSFVEAIEGSYSAVVGLPLVETRALLCEMQVL

Sequences:

>Translated_202_residues
MKLVLASGSPRRKELLGQLAFLNTNSAAPFEFEILAADIDESHQAGESAEAFVLRLAEEKALAGLALYGVESGANKQAVV
LGSDTIVVQGETILGKPKDEADAALILASLSGLQHQVMTAVALTDGIKTVSRLVKTKVQFCQLSEADILAYIATGEPMDK
AGAYGIQGLGGSFVEAIEGSYSAVVGLPLVETRALLCEMQVL
>Mature_202_residues
MKLVLASGSPRRKELLGQLAFLNTNSAAPFEFEILAADIDESHQAGESAEAFVLRLAEEKALAGLALYGVESGANKQAVV
LGSDTIVVQGETILGKPKDEADAALILASLSGLQHQVMTAVALTDGIKTVSRLVKTKVQFCQLSEADILAYIATGEPMDK
AGAYGIQGLGGSFVEAIEGSYSAVVGLPLVETRALLCEMQVL

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=199, Percent_Identity=39.6984924623116, Blast_Score=118, Evalue=3e-27,
Organism=Homo sapiens, GI291045181, Length=119, Percent_Identity=47.0588235294118, Blast_Score=103, Evalue=9e-23,
Organism=Homo sapiens, GI291045183, Length=196, Percent_Identity=35.2040816326531, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI310133124, Length=119, Percent_Identity=47.0588235294118, Blast_Score=102, Evalue=2e-22,
Organism=Escherichia coli, GI1789646, Length=200, Percent_Identity=52, Blast_Score=176, Evalue=7e-46,
Organism=Escherichia coli, GI87081830, Length=201, Percent_Identity=33.8308457711443, Blast_Score=90, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI193202443, Length=194, Percent_Identity=34.020618556701, Blast_Score=86, Evalue=9e-18,
Organism=Drosophila melanogaster, GI78706856, Length=205, Percent_Identity=36.5853658536585, Blast_Score=116, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21107; Mature: 21107

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLASGSPRRKELLGQLAFLNTNSAAPFEFEILAADIDESHQAGESAEAFVLRLAEEK
CEEEEECCCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
ALAGLALYGVESGANKQAVVLGSDTIVVQGETILGKPKDEADAALILASLSGLQHQVMTA
HHHEEEEEEECCCCCCEEEEEECCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VALTDGIKTVSRLVKTKVQFCQLSEADILAYIATGEPMDKAGAYGIQGLGGSFVEAIEGS
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCC
YSAVVGLPLVETRALLCEMQVL
CEEEECCCHHHHHHHHHHEECC
>Mature Secondary Structure
MKLVLASGSPRRKELLGQLAFLNTNSAAPFEFEILAADIDESHQAGESAEAFVLRLAEEK
CEEEEECCCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
ALAGLALYGVESGANKQAVVLGSDTIVVQGETILGKPKDEADAALILASLSGLQHQVMTA
HHHEEEEEEECCCCCCEEEEEECCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VALTDGIKTVSRLVKTKVQFCQLSEADILAYIATGEPMDKAGAYGIQGLGGSFVEAIEGS
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCC
YSAVVGLPLVETRALLCEMQVL
CEEEECCCHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA