| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167625727
Identifier: 167625727
GI number: 167625727
Start: 4635583
End: 4636626
Strand: Reverse
Name: 167625727
Synonym: Shal_3822
Alternate gene names: NA
Gene position: 4636626-4635583 (Counterclockwise)
Preceding gene: 167625728
Following gene: 167625726
Centisome position: 88.71
GC content: 47.13
Gene sequence:
>1044_bases ATGGGTATTTTTGAGCGTTATTTAAGTGTGTGGGTGGGGCTGGCTATTTTAGCGGGTGTTTTCCTTGGAAATTTGACCCC CGATACCTTTGCTGTGGTCGCTGGGCTTGAGTATGCCCATGTCAACATAGTGATAGCGGTTCTGATCTGGGTAATGATCT ACCCTATGATGGTTCAAATCGATTTCTCTGCCGTGAAAGACGTAGGTAAAAGCCCAAAAGGGCTAGTGCTTACACTGGTG ATCAACTGGCTGATCAAGCCGTTTACTATGGCGGCATTGGGTTGGTTATTCTTTAAAGTATTTTTTGTTGATTTCGTCGA TCCTCAGACTGCGAGCGAATATATCGCAGGTATGATCTTGCTTGGCGTTGCCCCATGTACAGCGATGGTATTTGTGTGGA GTCAGCTGACTAAAGGCGATCCTAACTACACCTTAGTACAAGTGTCGGTGAACGATTTAATCATGGTGGTCGCATTTGCC CCTATAACGGCGCTGCTTCTTGGGGTTAGCGATATCCAAGTCCCATGGGCGACCCTGTTATCTTCAGTTGGCTTATATGT GGTATTGCCTCTAATCGCTGGCGCAATTACAAGGCACTTGCTGCAGAAAAAGGGTGATGATACTAAGCTCAACACGTTCG TGGCGACATTAAAGCCGTGGTCTATGGTGGGCTTGCTGGCAACCGTTGTTTTACTCTTTGGTTTTCAAGCTCAAACCATT ATCGCCCAGCCGCAAAACATCGCTCTTATTGCGATACCCCTATTAATTCAAACTTATGGCATTTTCTTCATTGCGTTTTA TGCAGCGAAAAAAATGAAGCTAACCCATAAGATTGCGGCGCCAGCATGCATGATTGCCACCTCTAACTTCTTTGAGCTAG CGGTTGCAGTGGCTATCTCTCTGTTTGGGCTACACTCAGGTGCCGCGCTTGCTACCGTTGTGGGGGTATTGGTTGAAGTA CCTGTGATGTTATCACTGGTCGCCATTGCTAATCGCAGCCGTCACCTATTTGCTGATGATGCGGTTGTGGAGCCCTCAGC GTAA
Upstream 100 bases:
>100_bases CGGATGGGTGACCGCCCAGAACGCGTTAAAAACTGCTGTTAACCATCAAATAGTGACTTCGGTTGGTATTAGTACAATTT TTTATTAATAGGCAAATATT
Downstream 100 bases:
>100_bases ATTAACGTTATATAGCCAAGATAATTAGAGATTAGCTATTAGTAAATAGCATTTATAAATAGGTTGAGTTCTGTGCTAGC GCTAAAACGAAAGCAAGAAG
Product: arsenical-resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MGIFERYLSVWVGLAILAGVFLGNLTPDTFAVVAGLEYAHVNIVIAVLIWVMIYPMMVQIDFSAVKDVGKSPKGLVLTLV INWLIKPFTMAALGWLFFKVFFVDFVDPQTASEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDLIMVVAFA PITALLLGVSDIQVPWATLLSSVGLYVVLPLIAGAITRHLLQKKGDDTKLNTFVATLKPWSMVGLLATVVLLFGFQAQTI IAQPQNIALIAIPLLIQTYGIFFIAFYAAKKMKLTHKIAAPACMIATSNFFELAVAVAISLFGLHSGAALATVVGVLVEV PVMLSLVAIANRSRHLFADDAVVEPSA
Sequences:
>Translated_347_residues MGIFERYLSVWVGLAILAGVFLGNLTPDTFAVVAGLEYAHVNIVIAVLIWVMIYPMMVQIDFSAVKDVGKSPKGLVLTLV INWLIKPFTMAALGWLFFKVFFVDFVDPQTASEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDLIMVVAFA PITALLLGVSDIQVPWATLLSSVGLYVVLPLIAGAITRHLLQKKGDDTKLNTFVATLKPWSMVGLLATVVLLFGFQAQTI IAQPQNIALIAIPLLIQTYGIFFIAFYAAKKMKLTHKIAAPACMIATSNFFELAVAVAISLFGLHSGAALATVVGVLVEV PVMLSLVAIANRSRHLFADDAVVEPSA >Mature_346_residues GIFERYLSVWVGLAILAGVFLGNLTPDTFAVVAGLEYAHVNIVIAVLIWVMIYPMMVQIDFSAVKDVGKSPKGLVLTLVI NWLIKPFTMAALGWLFFKVFFVDFVDPQTASEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDLIMVVAFAP ITALLLGVSDIQVPWATLLSSVGLYVVLPLIAGAITRHLLQKKGDDTKLNTFVATLKPWSMVGLLATVVLLFGFQAQTII AQPQNIALIAIPLLIQTYGIFFIAFYAAKKMKLTHKIAAPACMIATSNFFELAVAVAISLFGLHSGAALATVVGVLVEVP VMLSLVAIANRSRHLFADDAVVEPSA
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=330, Percent_Identity=27.8787878787879, Blast_Score=106, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 37401; Mature: 37270
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFERYLSVWVGLAILAGVFLGNLTPDTFAVVAGLEYAHVNIVIAVLIWVMIYPMMVQI CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC DFSAVKDVGKSPKGLVLTLVINWLIKPFTMAALGWLFFKVFFVDFVDPQTASEYIAGMIL CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDLIMVVAFAPITALLLGVSDIQVPWATLL HHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SSVGLYVVLPLIAGAITRHLLQKKGDDTKLNTFVATLKPWSMVGLLATVVLLFGFQAQTI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHE IAQPQNIALIAIPLLIQTYGIFFIAFYAAKKMKLTHKIAAPACMIATSNFFELAVAVAIS EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LFGLHSGAALATVVGVLVEVPVMLSLVAIANRSRHLFADDAVVEPSA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC >Mature Secondary Structure GIFERYLSVWVGLAILAGVFLGNLTPDTFAVVAGLEYAHVNIVIAVLIWVMIYPMMVQI CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC DFSAVKDVGKSPKGLVLTLVINWLIKPFTMAALGWLFFKVFFVDFVDPQTASEYIAGMIL CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDLIMVVAFAPITALLLGVSDIQVPWATLL HHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH SSVGLYVVLPLIAGAITRHLLQKKGDDTKLNTFVATLKPWSMVGLLATVVLLFGFQAQTI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHE IAQPQNIALIAIPLLIQTYGIFFIAFYAAKKMKLTHKIAAPACMIATSNFFELAVAVAIS EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LFGLHSGAALATVVGVLVEVPVMLSLVAIANRSRHLFADDAVVEPSA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]