| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167625707
Identifier: 167625707
GI number: 167625707
Start: 4618466
End: 4618747
Strand: Reverse
Name: 167625707
Synonym: Shal_3802
Alternate gene names: NA
Gene position: 4618747-4618466 (Counterclockwise)
Preceding gene: 167625709
Following gene: 167625706
Centisome position: 88.36
GC content: 50.0
Gene sequence:
>282_bases ATGAGTAGCGTAAAGCAGAAACTGGTAATGGGGCTTGTTGCCGTATTCCTGTGTCTGTCATTTGCCGCGTCCGCTCATAG TTTGAGTCATTTGGACGATGGCGCTAAAACCCATTGTACTCTGTGTTATCACCAACACCAGGTCAACAACCTGCTGCCGA GTTGTGAGCTTCACATCGCTGTAGAGCGTCAGGGAGTTGTCAGCCAAGAGTACATCCTTCCACACTCCTACTCACGTCAT GTGAGTTTCTTTAACAGTCGCGCCCCTCCAGCTTCAGCCTAA
Upstream 100 bases:
>100_bases CAAAGCGTTTGTAACACAGAGTCACTTCTAGGCTTGACTTCAATTCTTATCCACATAAACTTGTCATGTTTTAATACACA AGGTTAACACTGTGATTCGA
Downstream 100 bases:
>100_bases TTCTTTACTAACAACACAAATTTAAGAATTTTCAAAGTATTCCCACGAGGAAGACTTAGCTGTATTTCGGAGAAAAGATG ACTATTTCAACTATGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIAVERQGVVSQEYILPHSYSRH VSFFNSRAPPASA
Sequences:
>Translated_93_residues MSSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIAVERQGVVSQEYILPHSYSRH VSFFNSRAPPASA >Mature_92_residues SSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIAVERQGVVSQEYILPHSYSRHV SFFNSRAPPASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10219; Mature: 10088
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCEEEEE VERQGVVSQEYILPHSYSRHVSFFNSRAPPASA ECCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure SSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCEEEEE VERQGVVSQEYILPHSYSRHVSFFNSRAPPASA ECCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA