| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is znuA [C]
Identifier: 167625705
GI number: 167625705
Start: 4616291
End: 4617217
Strand: Reverse
Name: znuA [C]
Synonym: Shal_3800
Alternate gene names: 167625705
Gene position: 4617217-4616291 (Counterclockwise)
Preceding gene: 167625706
Following gene: 167625704
Centisome position: 88.34
GC content: 52.54
Gene sequence:
>927_bases GTGCGCATCAATTCTAAGCAGTTTTTATCCAAGGGGCTTAAGGCTCTGACATTCACTTTGGCATTAGGCACTGCTAACAG CGCCGTTGCTGGCTTGAATATTTTCGCTTGTGAGCCTGAATATGCCGCATTGGCGAAAGAGTTGGCTCCAGATGCCAAGA TCTATTCGGCCACGACCGCAATGCAAGACCCACATCAGGTGCAGGCGAGGCCAAGTTTGATCGCAAAAATGCGACAGGCG GATCTGGCAATTTGTGCCGGCGCCGATCTTGAGGTGGGTTGGTTACCTATGCTGCAGATGAAGTCGGCTAACGCCAAGGT GCGATCGACCGATCAAGGCTTGTTCTTTGCCGCCGAGCAGATCGATACGCTTGATCGGCTCACGTCTGTGGATCGATCTA TGGGCGATGTACACGCAAAAGGTAATCCGCATCTGCATTTCGATCCCAAGCGTTTACTCGATGTCGCAAGCGCATTAACG GCTAAGCTTATCCAGTTAGATCCCGATGCGAAAGCAGAGTATGACGCGGCCTTAGCGAGCTTTAGCCAGCGTTGGTTAGC TGCGATCCCTCACTGGGAGGCTAAAGCGCAAACTTTACAGGGCAGTAAAGTGATCGCTTATCACTCTAGCTTCAAGTACC TGTTTAATTGGTTAGGGCTAGAGCAGGTCGCAGATCTTGAGCCGAAGCCTGGGATCCCACCGAGTAGCTCTCATCTGGCC GGCTTACTCAGTCGTGCTAAGCAGGGAGATATATTGGCGATCGTGATCGCTTCCTACCAGAGTGAGCGCGGCGCCGACTG GTTGGCTGAGCGCTCAGATCTGCCTGTGCTGATATTGCCTATGTCGGTTGGGGGCAATGAGCAGAGTGTCGATCTATTTG GTCTGTATGACAGCGCGATCGATCTGTTGCTGAGCGCGAAGCAATAA
Upstream 100 bases:
>100_bases GTGCGTTTGCAGTACACCAACCAGCAAGGGACTAACTTTGATGGCATCGAAGATGACAATGTCATCACTCTACAATATGT CATGACTCTGGGGGCTCACG
Downstream 100 bases:
>100_bases CGCTTAGTATGGCCATGGTAGTGCCTTGTCTTGTTTAGGCTTGGCATCGACTATGGCTAAAACAAACTAAGACAGATCGC CATAGGGAGATCTGTCTTAG
Product: periplasmic solute-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ABC Transporter Periplasmic Adhesin; BC-Type Metal Ion Transport System Periplasmic Component.
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRINSKQFLSKGLKALTFTLALGTANSAVAGLNIFACEPEYAALAKELAPDAKIYSATTAMQDPHQVQARPSLIAKMRQA DLAICAGADLEVGWLPMLQMKSANAKVRSTDQGLFFAAEQIDTLDRLTSVDRSMGDVHAKGNPHLHFDPKRLLDVASALT AKLIQLDPDAKAEYDAALASFSQRWLAAIPHWEAKAQTLQGSKVIAYHSSFKYLFNWLGLEQVADLEPKPGIPPSSSHLA GLLSRAKQGDILAIVIASYQSERGADWLAERSDLPVLILPMSVGGNEQSVDLFGLYDSAIDLLLSAKQ
Sequences:
>Translated_308_residues MRINSKQFLSKGLKALTFTLALGTANSAVAGLNIFACEPEYAALAKELAPDAKIYSATTAMQDPHQVQARPSLIAKMRQA DLAICAGADLEVGWLPMLQMKSANAKVRSTDQGLFFAAEQIDTLDRLTSVDRSMGDVHAKGNPHLHFDPKRLLDVASALT AKLIQLDPDAKAEYDAALASFSQRWLAAIPHWEAKAQTLQGSKVIAYHSSFKYLFNWLGLEQVADLEPKPGIPPSSSHLA GLLSRAKQGDILAIVIASYQSERGADWLAERSDLPVLILPMSVGGNEQSVDLFGLYDSAIDLLLSAKQ >Mature_308_residues MRINSKQFLSKGLKALTFTLALGTANSAVAGLNIFACEPEYAALAKELAPDAKIYSATTAMQDPHQVQARPSLIAKMRQA DLAICAGADLEVGWLPMLQMKSANAKVRSTDQGLFFAAEQIDTLDRLTSVDRSMGDVHAKGNPHLHFDPKRLLDVASALT AKLIQLDPDAKAEYDAALASFSQRWLAAIPHWEAKAQTLQGSKVIAYHSSFKYLFNWLGLEQVADLEPKPGIPPSSSHLA GLLSRAKQGDILAIVIASYQSERGADWLAERSDLPVLILPMSVGGNEQSVDLFGLYDSAIDLLLSAKQ
Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33326; Mature: 33326
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00172 XYLOSE_ISOMERASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRINSKQFLSKGLKALTFTLALGTANSAVAGLNIFACEPEYAALAKELAPDAKIYSATTA CCCCHHHHHHHHHHHHEEEEEECCCCCCEECCEEEEECCHHHHHHHHHCCCCCEEEHHHH MQDPHQVQARPSLIAKMRQADLAICAGADLEVGWLPMLQMKSANAKVRSTDQGLFFAAEQ CCCCHHHHCCHHHHHHHHHHCEEEEECCCCCCCCCHHEEECCCCCEEEECCCCEEEEHHH IDTLDRLTSVDRSMGDVHAKGNPHLHFDPKRLLDVASALTAKLIQLDPDAKAEYDAALAS HHHHHHHHHHHHHHCCEECCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FSQRWLAAIPHWEAKAQTLQGSKVIAYHSSFKYLFNWLGLEQVADLEPKPGIPPSSSHLA HHHHHHHHCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHH GLLSRAKQGDILAIVIASYQSERGADWLAERSDLPVLILPMSVGGNEQSVDLFGLYDSAI HHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEHHHHH DLLLSAKQ HHHHCCCC >Mature Secondary Structure MRINSKQFLSKGLKALTFTLALGTANSAVAGLNIFACEPEYAALAKELAPDAKIYSATTA CCCCHHHHHHHHHHHHEEEEEECCCCCCEECCEEEEECCHHHHHHHHHCCCCCEEEHHHH MQDPHQVQARPSLIAKMRQADLAICAGADLEVGWLPMLQMKSANAKVRSTDQGLFFAAEQ CCCCHHHHCCHHHHHHHHHHCEEEEECCCCCCCCCHHEEECCCCCEEEECCCCEEEEHHH IDTLDRLTSVDRSMGDVHAKGNPHLHFDPKRLLDVASALTAKLIQLDPDAKAEYDAALAS HHHHHHHHHHHHHHCCEECCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FSQRWLAAIPHWEAKAQTLQGSKVIAYHSSFKYLFNWLGLEQVADLEPKPGIPPSSSHLA HHHHHHHHCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHH GLLSRAKQGDILAIVIASYQSERGADWLAERSDLPVLILPMSVGGNEQSVDLFGLYDSAI HHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEHHHHH DLLLSAKQ HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA