| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is caiD [C]
Identifier: 167625699
GI number: 167625699
Start: 4610725
End: 4611531
Strand: Reverse
Name: caiD [C]
Synonym: Shal_3794
Alternate gene names: 167625699
Gene position: 4611531-4610725 (Counterclockwise)
Preceding gene: 167625702
Following gene: 167625698
Centisome position: 88.23
GC content: 45.35
Gene sequence:
>807_bases ATGACTTATGATTTAGTACGCGTCGTCAAAAAAAATGGCATTGCTTACGTGAGTCTTAATCGACCTGAAAAGTATAATGC ACTGAATTGTAGACTTTTTTGTGAGATTGAACACTGTATAAAAACATTGTCGAAAGACCGAACGCTTACTGCGGTGGTTC TTTTCGGTGAAGGGGGCAATTTTAGCTCAGGTTTAGATGTAAAAAGTGTGATGAGCTCGCCTTTAGATGCAGTTAAACTA TTATTTAAGTTTCTACCGGGGAATGCCAATTTGGCGCAGAGGGTCTCCATTGGTTGGCGTCGATTACCTGTACCTGTCAT CGCGGTACTCGAGGGGGTGTGTTATGGCGGTGGTATGCAGATCGTTCTTGGAGCCGATTTTAGAATAGCGGATCCCGATT GTAAAATGTCGATAATGGAAGCGAAATGGGGCTTGGTTCCTGATATGGCTGGTTTGGTTGGTTTACGAGAGTTAATGCCA AAAGATCAGGCGCTTATGTTAACGATGTCGGCGGATGTATTGACTGCAGAGCAGGCGCTTGCCGCTAACCTTGTGACCTC GGTAGAAGCTGAGCCATTAGCCGCAGCTACGGCTCTAGCGACCAAATTGTCGCAAACGTCCCCTGATGCCAATGCGGCTA TCAAGCGCAGTATTAATAACAATTGGTCGGCCTCTATTCGGCAATTACTCAGGCGCGAGTCCTGGTATCAAATACGATTA TTACTGGGAAAAAATCGAATGATTGCAGCGTTAAGACAAGGTAAGGATCCAGATAAGAGATATCGAAATCGGCAGTCAGG TTGGTAG
Upstream 100 bases:
>100_bases AGTGTCATAATTTCACCGCATGTTATATCTATTAACCTAATATGCCAAATGTGTTAACTTGTTCAGTCTGGACAGACCAC TTGCCAAGAAAGGCCTTAAT
Downstream 100 bases:
>100_bases TTTTTAGTAAAAAGCATTAAGCGTGATCTGGTTCACGAATTGCTGTGATTTTTATGTCGTAGGCAGGCGCTTCTTTTACA CTTCCCGCCTATTTATTGTT
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTYDLVRVVKKNGIAYVSLNRPEKYNALNCRLFCEIEHCIKTLSKDRTLTAVVLFGEGGNFSSGLDVKSVMSSPLDAVKL LFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGVCYGGGMQIVLGADFRIADPDCKMSIMEAKWGLVPDMAGLVGLRELMP KDQALMLTMSADVLTAEQALAANLVTSVEAEPLAAATALATKLSQTSPDANAAIKRSINNNWSASIRQLLRRESWYQIRL LLGKNRMIAALRQGKDPDKRYRNRQSGW
Sequences:
>Translated_268_residues MTYDLVRVVKKNGIAYVSLNRPEKYNALNCRLFCEIEHCIKTLSKDRTLTAVVLFGEGGNFSSGLDVKSVMSSPLDAVKL LFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGVCYGGGMQIVLGADFRIADPDCKMSIMEAKWGLVPDMAGLVGLRELMP KDQALMLTMSADVLTAEQALAANLVTSVEAEPLAAATALATKLSQTSPDANAAIKRSINNNWSASIRQLLRRESWYQIRL LLGKNRMIAALRQGKDPDKRYRNRQSGW >Mature_267_residues TYDLVRVVKKNGIAYVSLNRPEKYNALNCRLFCEIEHCIKTLSKDRTLTAVVLFGEGGNFSSGLDVKSVMSSPLDAVKLL FKFLPGNANLAQRVSIGWRRLPVPVIAVLEGVCYGGGMQIVLGADFRIADPDCKMSIMEAKWGLVPDMAGLVGLRELMPK DQALMLTMSADVLTAEQALAANLVTSVEAEPLAAATALATKLSQTSPDANAAIKRSINNNWSASIRQLLRRESWYQIRLL LGKNRMIAALRQGKDPDKRYRNRQSGW
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=197, Percent_Identity=31.9796954314721, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI213417737, Length=239, Percent_Identity=26.3598326359833, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI157694516, Length=239, Percent_Identity=26.3598326359833, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI194097323, Length=221, Percent_Identity=27.1493212669683, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI68989263, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI157694520, Length=200, Percent_Identity=27, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI221142681, Length=231, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1790281, Length=216, Percent_Identity=27.3148148148148, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787659, Length=262, Percent_Identity=25.9541984732824, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787660, Length=240, Percent_Identity=30, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1788682, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082183, Length=222, Percent_Identity=24.3243243243243, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17540714, Length=237, Percent_Identity=29.535864978903, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25145438, Length=231, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17534483, Length=255, Percent_Identity=25.8823529411765, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17536985, Length=218, Percent_Identity=25.2293577981651, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560910, Length=209, Percent_Identity=24.8803827751196, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17554946, Length=229, Percent_Identity=23.1441048034935, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17558304, Length=209, Percent_Identity=25.8373205741627, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129971, Length=222, Percent_Identity=24.7747747747748, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24653477, Length=222, Percent_Identity=24.7747747747748, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24653139, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922422, Length=191, Percent_Identity=27.7486910994764, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI19920382, Length=221, Percent_Identity=24.8868778280543, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI21357171, Length=200, Percent_Identity=23, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29498; Mature: 29367
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDLVRVVKKNGIAYVSLNRPEKYNALNCRLFCEIEHCIKTLSKDRTLTAVVLFGEGGN CCHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCC FSSGLDVKSVMSSPLDAVKLLFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGVCYGGGMQ CCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE IVLGADFRIADPDCKMSIMEAKWGLVPDMAGLVGLRELMPKDQALMLTMSADVLTAEQAL EEEECCEEEECCCCCEEHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH AANLVTSVEAEPLAAATALATKLSQTSPDANAAIKRSINNNWSASIRQLLRRESWYQIRL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE LLGKNRMIAALRQGKDPDKRYRNRQSGW EECCCHHHHHHHCCCCHHHHHHCCCCCC >Mature Secondary Structure TYDLVRVVKKNGIAYVSLNRPEKYNALNCRLFCEIEHCIKTLSKDRTLTAVVLFGEGGN CHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCC FSSGLDVKSVMSSPLDAVKLLFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGVCYGGGMQ CCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE IVLGADFRIADPDCKMSIMEAKWGLVPDMAGLVGLRELMPKDQALMLTMSADVLTAEQAL EEEECCEEEECCCCCEEHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH AANLVTSVEAEPLAAATALATKLSQTSPDANAAIKRSINNNWSASIRQLLRRESWYQIRL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE LLGKNRMIAALRQGKDPDKRYRNRQSGW EECCCHHHHHHHCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA