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The map label for this gene is 167625664

Identifier: 167625664

GI number: 167625664

Start: 4563472

End: 4564128

Strand: Reverse

Name: 167625664

Synonym: Shal_3759

Alternate gene names: NA

Gene position: 4564128-4563472 (Counterclockwise)

Preceding gene: 167625665

Following gene: 167625663

Centisome position: 87.32

GC content: 40.33

Gene sequence:

>657_bases
ATGAATAGAATAGATGAGCAATTTGATGGGGATGATTTTAGTCATCAAGACTTGAGTGATTCACATTTTGAGCGGTGTAA
ATTTTATAACTGTAATTTTAATCATACCGATCTCAGAGAGAGCCGTTTTGTTGACTGCTCATTTATTGAGTCAGGTTCAT
TGAGTGGTTGTAATTTTGAGTATGCAAATTTGCAAGATTCGAGCTTCAAAGGTTGTCAGTTATCTATGGTGATTTTTACT
GGGGCCAATTGCTTCGGTGCGGAGTTTAGAAACTGCGACTTGAAAGGGGCTAACTTTTTTAAGGCGAGTTTTGCCAACCA
GATCAGTCGACAAGTCTATTTCTGTTCTGTTTATATTACTGGGTGTAATTTGTCTTACGCTAATTTTGAGCGTCAATGCA
TCGAGAAATGCGATCTATTTGAAAACAAATGGACGGGCGCAAATTTATATGGGGCGTCATTTAAGGGGTCTGATTTGAGT
CGGGGAGATTTTTCCAGTGATGCCTGGGGACAGTTTAATGTGCAAGGCTGCGATCTTTCTTATTCTGAACTATCTGGACT
GGACCCAAGAAAGGTGGATCTTAGTAATGTCAAAATATGCATGTGGCAGCAGGAGCAGCTATTAGCGCCTCTTGGAGTCA
TTGTTGGAGCTGACTAA

Upstream 100 bases:

>100_bases
TTAACTTGTTGATATTTAAGGCTTTGTTTTTATTGGTTTCTCATGGCGTGAATGTTAGTCTCCGATTTCTAAACTTGGTT
TTATGTTGCAAGAGGCGTTA

Downstream 100 bases:

>100_bases
CTGTTTCAGTCTGAGTCAATTTCAACTATGCCAAGTGCCCACTTTGGCAAAATAGTCGCAAATTTTAACTTTTGATTTTT
AATCTAGGCCTCAGGTTAGC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNRIDEQFDGDDFSHQDLSDSHFERCKFYNCNFNHTDLRESRFVDCSFIESGSLSGCNFEYANLQDSSFKGCQLSMVIFT
GANCFGAEFRNCDLKGANFFKASFANQISRQVYFCSVYITGCNLSYANFERQCIEKCDLFENKWTGANLYGASFKGSDLS
RGDFSSDAWGQFNVQGCDLSYSELSGLDPRKVDLSNVKICMWQQEQLLAPLGVIVGAD

Sequences:

>Translated_218_residues
MNRIDEQFDGDDFSHQDLSDSHFERCKFYNCNFNHTDLRESRFVDCSFIESGSLSGCNFEYANLQDSSFKGCQLSMVIFT
GANCFGAEFRNCDLKGANFFKASFANQISRQVYFCSVYITGCNLSYANFERQCIEKCDLFENKWTGANLYGASFKGSDLS
RGDFSSDAWGQFNVQGCDLSYSELSGLDPRKVDLSNVKICMWQQEQLLAPLGVIVGAD
>Mature_218_residues
MNRIDEQFDGDDFSHQDLSDSHFERCKFYNCNFNHTDLRESRFVDCSFIESGSLSGCNFEYANLQDSSFKGCQLSMVIFT
GANCFGAEFRNCDLKGANFFKASFANQISRQVYFCSVYITGCNLSYANFERQCIEKCDLFENKWTGANLYGASFKGSDLS
RGDFSSDAWGQFNVQGCDLSYSELSGLDPRKVDLSNVKICMWQQEQLLAPLGVIVGAD

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 24602; Mature: 24602

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIDEQFDGDDFSHQDLSDSHFERCKFYNCNFNHTDLRESRFVDCSFIESGSLSGCNFE
CCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCCHHCCEEEEEECCCCCCCCCEE
YANLQDSSFKGCQLSMVIFTGANCFGAEFRNCDLKGANFFKASFANQISRQVYFCSVYIT
ECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEE
GCNLSYANFERQCIEKCDLFENKWTGANLYGASFKGSDLSRGDFSSDAWGQFNVQGCDLS
ECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCC
YSELSGLDPRKVDLSNVKICMWQQEQLLAPLGVIVGAD
HHHHCCCCCCEEECCCEEEEEECHHHHHCCCCEEEECC
>Mature Secondary Structure
MNRIDEQFDGDDFSHQDLSDSHFERCKFYNCNFNHTDLRESRFVDCSFIESGSLSGCNFE
CCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCCHHCCEEEEEECCCCCCCCCEE
YANLQDSSFKGCQLSMVIFTGANCFGAEFRNCDLKGANFFKASFANQISRQVYFCSVYIT
ECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEE
GCNLSYANFERQCIEKCDLFENKWTGANLYGASFKGSDLSRGDFSSDAWGQFNVQGCDLS
ECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCC
YSELSGLDPRKVDLSNVKICMWQQEQLLAPLGVIVGAD
HHHHCCCCCCEEECCCEEEEEECHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA