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The map label for this gene is 167625628

Identifier: 167625628

GI number: 167625628

Start: 4521232

End: 4521522

Strand: Reverse

Name: 167625628

Synonym: Shal_3723

Alternate gene names: NA

Gene position: 4521522-4521232 (Counterclockwise)

Preceding gene: 167625629

Following gene: 167625627

Centisome position: 86.5

GC content: 46.74

Gene sequence:

>291_bases
ATGTCTAGACCTAAGAAATGCCGCCACCTAAGTAGCTGTGTGCCATGTAGTTTATTTAAACCCAATGGCATTCCATCGAG
TGAGCTTGAGAAAATTCAGTTAGAAGCTGATGAATTTGAGGCACTCAACCTAGGAGATGTACAAAAACTGAGTCAGCTCG
ATGCCGCGGCATCAATGGGGATCTCACGGCAAACCTTTGGTTATCTGTTGGCGAGTGCGCGCAGGAAAGTGGCAACGGCG
GTCACTCAAGGTCAGGCGCTTTTACTTCCTCTCAATGTGAAAAAGGATTAA

Upstream 100 bases:

>100_bases
AGCCAATAACTTGCAGTAATTAGCTGCATAACAAGGTAAAAGCGCAACCAATTCACTCCAACGAATTAATTCCAACAAGA
TAGTCAGGGGGCAGTTTGTT

Downstream 100 bases:

>100_bases
TCATGGTCATTGCTATTCCTATGAGTCGAGATCGTTTAGCGACTCACTTTACTAAAGCGCCGCAGATCGGCTTTTTTGAT
GAGTATCAGCAGTTAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSRPKKCRHLSSCVPCSLFKPNGIPSSELEKIQLEADEFEALNLGDVQKLSQLDAAASMGISRQTFGYLLASARRKVATA
VTQGQALLLPLNVKKD

Sequences:

>Translated_96_residues
MSRPKKCRHLSSCVPCSLFKPNGIPSSELEKIQLEADEFEALNLGDVQKLSQLDAAASMGISRQTFGYLLASARRKVATA
VTQGQALLLPLNVKKD
>Mature_95_residues
SRPKKCRHLSSCVPCSLFKPNGIPSSELEKIQLEADEFEALNLGDVQKLSQLDAAASMGISRQTFGYLLASARRKVATAV
TQGQALLLPLNVKKD

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3723_SHEHH (B0TUZ6)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001675922.1
- GeneID:   5906846
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_3723
- HOGENOM:   HBG513201
- OMA:   QTFGYLL
- ProtClustDB:   CLSK905901
- BioCyc:   SHAL458817:SHAL_3723-MONOMER
- HAMAP:   MF_00674
- InterPro:   IPR002852

Pfam domain/function: PF02001 DUF134

EC number: NA

Molecular weight: Translated: 10430; Mature: 10299

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPKKCRHLSSCVPCSLFKPNGIPSSELEKIQLEADEFEALNLGDVQKLSQLDAAASMG
CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
ISRQTFGYLLASARRKVATAVTQGQALLLPLNVKKD
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure 
SRPKKCRHLSSCVPCSLFKPNGIPSSELEKIQLEADEFEALNLGDVQKLSQLDAAASMG
CCCHHHHHHHCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
ISRQTFGYLLASARRKVATAVTQGQALLLPLNVKKD
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA