| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is zraS [C]
Identifier: 167625596
GI number: 167625596
Start: 4492991
End: 4494385
Strand: Reverse
Name: zraS [C]
Synonym: Shal_3691
Alternate gene names: 167625596
Gene position: 4494385-4492991 (Counterclockwise)
Preceding gene: 167625597
Following gene: 167625595
Centisome position: 85.99
GC content: 46.02
Gene sequence:
>1395_bases ATGCCTGTTTTTGTGACTTTCAATATCTACCTTTTTTACGGCCTCGTGTTTTTTTCGATGGGCTGCGTAGTGGTATTTCG AAATTTTCGCTACAGTCAATTAAAAGTAGCCCCAACGCTTTGGGCGCTCGCGGTGTTTGGTTTCTCCCATGCTTTTCATG AGTGGTCTGAGCTATATGTACTCATTTTTACAGACCATATCACCCCCCAATATCGCCTGCTGACCCAGTGGCTCTGTTTA GCCAAGTTATTTTTATCTTATGCCGCCTTAATGGTATTTGCCTGGCAGATTTTAACCATCACCAATAAGCGTCTAGCGCA TATCGGTCACGGTGTAATTATCACTCTGTTACTGTGCTATGCCTACCTAGTGATCCCCGATCTTCATCACCTCGCGGTTA ATCAAACCGGTTTCGAAGAGGCCAGTCAGTTCACTCGGATATTGATAGGGTTTGGCAGCGCGATGCTAGCTGGAGTGGGA ATGGTGGTCTACGGCAACAGCTTGCGCCAAGAAGAGCATAGCTACGGACTTTACTTTGCTCTCAGCGGTGTCGGTCTAAT GGTTTATGGCGTGCTTTCTGGGCTAGTGCCGACAGAGTACCACTATAGCGTACCAATCTATCGAACATTGGCTGGTGGAG TCATTTTAGTTGCTCTATTTAAGGCGCTTAAAGTATTTGATCTAGAGAAGGAGCAAAAGACTGCCGCTAAACTGAAACGT GCTATCGAGGCAGATAAGTACAAGGCGATAGGCCAGTTAGCAATGGGAGTCGCTCATGAGATCAATAACCCTCTAGCATC GTCCACTTTAGCGCTGGATCTGTGGGAGCGAAAACATCCTCAGCTGTCGGATTCAGAAGCAAACTACCTAAGCCGCGTTC GCTTGGGGATTGAACGCGCATCATCGATTAGTAAAGAGCTACTCAGTTACGCAAGGCCCGCTTCGGGTAAGCGCTGTTTT GTTGCTCTGAGAGAGGTTTTAGACTCCGGTGTGAAGTTACTGTCACACCGCACTAAGCAGTATAATATTCAGTTGGATTG CAGTGAAAATATCGTCTTATATGCCGAGAGAATCAAACTAGAAGAGTTGTTCATCAATCTTCTGTGTAATGCTATTGATG CATCACCGACGAATAGTTCGATTATCGTGAGTGCGACTCAGGATGAGCATAAAGTCAGTGTGTCTATAGAGGACTCTGGT TGTGGTATGAGCCAAGTAGAGTTATCTCGCGCAACAGAATTGTTTTATTCGACTAAGGCTGTCGGTCAAGGTACGGGGCT GGGTTTGGCGATTTGTGAACAGATAGTCACACTACATAATGGCAAGATGCATATTACGAGTAGTAAAGAGAAGGGCACTC GTGTGGAACTCACTTTTTATCGGGAGCAGCATTGA
Upstream 100 bases:
>100_bases TTAAATGGCTTTTTTGTTTTATGAGCTAGCGCAAGTTACAGCCTAACAAAATAGGAAGCAGATCAAATCATAGCTCGGAG CCAGATGTTATGTTGGCGAT
Downstream 100 bases:
>100_bases TGATCACTATTCTATTGGCGGAAGACGACGTTGAACTTAGGCTAAATATGGTTGAGATTCTAGAGCTTGAGGGTTTTAGT GTCACCGCTGTTGAAAGCGC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MPVFVTFNIYLFYGLVFFSMGCVVVFRNFRYSQLKVAPTLWALAVFGFSHAFHEWSELYVLIFTDHITPQYRLLTQWLCL AKLFLSYAALMVFAWQILTITNKRLAHIGHGVIITLLLCYAYLVIPDLHHLAVNQTGFEEASQFTRILIGFGSAMLAGVG MVVYGNSLRQEEHSYGLYFALSGVGLMVYGVLSGLVPTEYHYSVPIYRTLAGGVILVALFKALKVFDLEKEQKTAAKLKR AIEADKYKAIGQLAMGVAHEINNPLASSTLALDLWERKHPQLSDSEANYLSRVRLGIERASSISKELLSYARPASGKRCF VALREVLDSGVKLLSHRTKQYNIQLDCSENIVLYAERIKLEELFINLLCNAIDASPTNSSIIVSATQDEHKVSVSIEDSG CGMSQVELSRATELFYSTKAVGQGTGLGLAICEQIVTLHNGKMHITSSKEKGTRVELTFYREQH
Sequences:
>Translated_464_residues MPVFVTFNIYLFYGLVFFSMGCVVVFRNFRYSQLKVAPTLWALAVFGFSHAFHEWSELYVLIFTDHITPQYRLLTQWLCL AKLFLSYAALMVFAWQILTITNKRLAHIGHGVIITLLLCYAYLVIPDLHHLAVNQTGFEEASQFTRILIGFGSAMLAGVG MVVYGNSLRQEEHSYGLYFALSGVGLMVYGVLSGLVPTEYHYSVPIYRTLAGGVILVALFKALKVFDLEKEQKTAAKLKR AIEADKYKAIGQLAMGVAHEINNPLASSTLALDLWERKHPQLSDSEANYLSRVRLGIERASSISKELLSYARPASGKRCF VALREVLDSGVKLLSHRTKQYNIQLDCSENIVLYAERIKLEELFINLLCNAIDASPTNSSIIVSATQDEHKVSVSIEDSG CGMSQVELSRATELFYSTKAVGQGTGLGLAICEQIVTLHNGKMHITSSKEKGTRVELTFYREQH >Mature_463_residues PVFVTFNIYLFYGLVFFSMGCVVVFRNFRYSQLKVAPTLWALAVFGFSHAFHEWSELYVLIFTDHITPQYRLLTQWLCLA KLFLSYAALMVFAWQILTITNKRLAHIGHGVIITLLLCYAYLVIPDLHHLAVNQTGFEEASQFTRILIGFGSAMLAGVGM VVYGNSLRQEEHSYGLYFALSGVGLMVYGVLSGLVPTEYHYSVPIYRTLAGGVILVALFKALKVFDLEKEQKTAAKLKRA IEADKYKAIGQLAMGVAHEINNPLASSTLALDLWERKHPQLSDSEANYLSRVRLGIERASSISKELLSYARPASGKRCFV ALREVLDSGVKLLSHRTKQYNIQLDCSENIVLYAERIKLEELFINLLCNAIDASPTNSSIIVSATQDEHKVSVSIEDSGC GMSQVELSRATELFYSTKAVGQGTGLGLAICEQIVTLHNGKMHITSSKEKGTRVELTFYREQH
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. May Function As A Membrane-Associated Protein Kinase That Phosphorylates Zrar In Response To High Concentrations Of Zinc Or Lead In The Medium. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=31.7391304347826, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788549, Length=236, Percent_Identity=29.2372881355932, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790861, Length=237, Percent_Identity=28.2700421940928, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788393, Length=131, Percent_Identity=32.824427480916, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1786600, Length=210, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789149, Length=253, Percent_Identity=24.5059288537549, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790551, Length=218, Percent_Identity=27.9816513761468, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1786783, Length=98, Percent_Identity=36.734693877551, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1786912, Length=325, Percent_Identity=23.0769230769231, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51851; Mature: 51720
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFVTFNIYLFYGLVFFSMGCVVVFRNFRYSQLKVAPTLWALAVFGFSHAFHEWSELYV CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEE LIFTDHITPQYRLLTQWLCLAKLFLSYAALMVFAWQILTITNKRLAHIGHGVIITLLLCY EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH AYLVIPDLHHLAVNQTGFEEASQFTRILIGFGSAMLAGVGMVVYGNSLRQEEHSYGLYFA HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCEEEE LSGVGLMVYGVLSGLVPTEYHYSVPIYRTLAGGVILVALFKALKVFDLEKEQKTAAKLKR EHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AIEADKYKAIGQLAMGVAHEINNPLASSTLALDLWERKHPQLSDSEANYLSRVRLGIERA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEHHHCCCCCCCCCHHHHHHHHHHHHHHH SSISKELLSYARPASGKRCFVALREVLDSGVKLLSHRTKQYNIQLDCSENIVLYAERIKL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEHHHHHH EELFINLLCNAIDASPTNSSIIVSATQDEHKVSVSIEDSGCGMSQVELSRATELFYSTKA HHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH VGQGTGLGLAICEQIVTLHNGKMHITSSKEKGTRVELTFYREQH CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCC >Mature Secondary Structure PVFVTFNIYLFYGLVFFSMGCVVVFRNFRYSQLKVAPTLWALAVFGFSHAFHEWSELYV CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEE LIFTDHITPQYRLLTQWLCLAKLFLSYAALMVFAWQILTITNKRLAHIGHGVIITLLLCY EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH AYLVIPDLHHLAVNQTGFEEASQFTRILIGFGSAMLAGVGMVVYGNSLRQEEHSYGLYFA HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCEEEE LSGVGLMVYGVLSGLVPTEYHYSVPIYRTLAGGVILVALFKALKVFDLEKEQKTAAKLKR EHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AIEADKYKAIGQLAMGVAHEINNPLASSTLALDLWERKHPQLSDSEANYLSRVRLGIERA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEHHHCCCCCCCCCHHHHHHHHHHHHHHH SSISKELLSYARPASGKRCFVALREVLDSGVKLLSHRTKQYNIQLDCSENIVLYAERIKL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEHHHHHH EELFINLLCNAIDASPTNSSIIVSATQDEHKVSVSIEDSGCGMSQVELSRATELFYSTKA HHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH VGQGTGLGLAICEQIVTLHNGKMHITSSKEKGTRVELTFYREQH CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]