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The map label for this gene is priB

Identifier: 167625580

GI number: 167625580

Start: 4476194

End: 4476499

Strand: Reverse

Name: priB

Synonym: Shal_3674

Alternate gene names: 167625580

Gene position: 4476499-4476194 (Counterclockwise)

Preceding gene: 167625581

Following gene: 167625579

Centisome position: 85.64

GC content: 40.52

Gene sequence:

>306_bases
GTGACCACAAACAATTTGGTATTAGCAGGAACCATTACGCGTTCTAGGCAATTTGATAGTCCAGCAGGCATTGCCCATAC
GGTAGTGATGTTAGAACACAAATCGCAGCGTTACGAAGCAGGAATGTTACGCAACGTTTATTGCCAAATCCAAGTTGTGT
TAAGTGGTGAACACTTTAATAGTGTTTCAAAAAATCTGAAAGCCGGCGTTGAAATACAAGTCGAAGGCTTCATTAATCTG
CAACAGAGCAGAAATGGTCAAAATCGCTTGGTTTTACACGCTGAAAATGTCGAATTGAAAACTTAG

Upstream 100 bases:

>100_bases
AGCGCGATACACGTCGTTCATCTGAAGAGCGTGCACCTCGTGCAGAAGCTGCTGAAGAAGTTGAAGAAAGCGCTGAAAAC
ACTGCTGAGTAAGTTTTTTT

Downstream 100 bases:

>100_bases
GAGACTGTCACATGGCACGTTATTTCCGTCGTCGCAAGTTCTGCCGTTTCACTGCAGAAGGCGTTACCGAGATCGATTAC
AAAGATATCGTAACTTTGAA

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTTNNLVLAGTITRSRQFDSPAGIAHTVVMLEHKSQRYEAGMLRNVYCQIQVVLSGEHFNSVSKNLKAGVEIQVEGFINL
QQSRNGQNRLVLHAENVELKT

Sequences:

>Translated_101_residues
MTTNNLVLAGTITRSRQFDSPAGIAHTVVMLEHKSQRYEAGMLRNVYCQIQVVLSGEHFNSVSKNLKAGVEIQVEGFINL
QQSRNGQNRLVLHAENVELKT
>Mature_100_residues
TTNNLVLAGTITRSRQFDSPAGIAHTVVMLEHKSQRYEAGMLRNVYCQIQVVLSGEHFNSVSKNLKAGVEIQVEGFINLQ
QSRNGQNRLVLHAENVELKT

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS)

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790645, Length=98, Percent_Identity=41.8367346938776, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PRIB_SHEHH (B0TUU8)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001675874.1
- ProteinModelPortal:   B0TUU8
- SMR:   B0TUU8
- GeneID:   5903954
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_3674
- HOGENOM:   HBG632331
- OMA:   WCRMPVI
- ProtClustDB:   PRK02801
- BioCyc:   SHAL458817:SHAL_3674-MONOMER
- HAMAP:   MF_00720
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- Gene3D:   G3DSA:2.40.50.140

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 11279; Mature: 11148

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNNLVLAGTITRSRQFDSPAGIAHTVVMLEHKSQRYEAGMLRNVYCQIQVVLSGEHFN
CCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC
SVSKNLKAGVEIQVEGFINLQQSRNGQNRLVLHAENVELKT
HHHHHCCCCEEEEEEEEEEEECCCCCCCEEEEEECCEEECC
>Mature Secondary Structure 
TTNNLVLAGTITRSRQFDSPAGIAHTVVMLEHKSQRYEAGMLRNVYCQIQVVLSGEHFN
CCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC
SVSKNLKAGVEIQVEGFINLQQSRNGQNRLVLHAENVELKT
HHHHHCCCCEEEEEEEEEEEECCCCCCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA