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The map label for this gene is 167625557

Identifier: 167625557

GI number: 167625557

Start: 4451394

End: 4452536

Strand: Reverse

Name: 167625557

Synonym: Shal_3651

Alternate gene names: NA

Gene position: 4452536-4451394 (Counterclockwise)

Preceding gene: 167625558

Following gene: 167625556

Centisome position: 85.18

GC content: 46.54

Gene sequence:

>1143_bases
ATGACGTTTGAAAACTATCGAAATCAAATAGCTGTTGGGATGTCGCTGCTTTGCGCTCACTTTATATTTAGCTGTAGCAC
TTTAGCCGCCGAACCTGTGATGATCACAGTATCGAAAGGCTTTGGGTTAACCTTATATGCCTCCGATCTCGGTGATGCTA
AGCAGCTTGCGGTTGGCGATAAGGGCACCTTATTTGTTGGCTCCTATCGAGACGGTACCATTACCGCCTTGGTCGATGCT
GACAACGATGGTCGGGTCGATAAGCGTTATTCGATCGCCAAGGGGCTAGATTATCCTGAAGCGATCGCCTTTCATGATGG
TGCGTTATATGTTGCAGAAAAGGAGCGCATCTTACGCTTTAACCAGGTTGAGTCCCGACTAAAAAGGCCGGGACGTCCGA
AAGAGGTTTATGACCGCCTACCGGGTAATAGTAAGAAGAGTCGCCGCGCCATGCGTTTTGGTCCCGACGGCCTGTTATAT
ATTGCCATAGGAGCCCCCTGTAACGTCTGTGAATCTGAAGCGCCCTATAGCAGTATTTTAGCGATTGATGTGGACACTGG
CGCCAGCGAGCAAATAGTCAGTGGCGTCAGGAAGGTACTGGCCTTTGATTGGTCAGTCGAAGATAAGCAGCTTTGGTTCG
CTGATAATGGCCGTGATTGGATGGGCGATAACCTGCCACCGGATGAGATCAATAAAGTCGAACGCAAGGGGAGCCACTTT
GGCTTTCCCTATATTCATGCTACCGACATTATAGAACCTGCTTATGATAAGCCTAAAAACTTAAAAGTCGTTGCTCCTAG
GTATGAATTGCCAGCTCATGTTGGCGCTAAGGGGCTTCACTTTTATCGTGGTAAACAGTTCCCTGAGCGTTTCCATAATC
AGATGTTTGTTGCCGAAAACGGTTCATGGAATCGTTCAAGTAAAGTCGGCTATCAAGTTGTCATGCTAGAAATCAAAGAT
GACCAAGTCATTAAAAGAAGTACAGTAGTCAGTTTTCTAGACGGAGAGTTCCCCGTCGCAAGACCATATGCATTGGTCAC
GGCGCCCGATGGTGCTATGTATATTTCTGATGACCTAAAGGGCAACATATACCGTTTGTTCTATAAAGATTCAGCAAAAA
ATCAGTCACAGGATAATGATTAA

Upstream 100 bases:

>100_bases
CTCTGGAGACAGAAAAACTTGGTTAGAGGCTAAGGGTGATATTGCCCAGCTCTAATCGGCAGTTTGAGATGAATGATTAT
AATCAGACAAAAGAATAATA

Downstream 100 bases:

>100_bases
TGAGTGATGCGATAGATTTAAGCCTTGATGGTGTTGAGCAGATGCCTCTACGCCGCTTCACGGAAGAGGCATATCTGAAC
TATTCCATGTATGTGATCAT

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTFENYRNQIAVGMSLLCAHFIFSCSTLAAEPVMITVSKGFGLTLYASDLGDAKQLAVGDKGTLFVGSYRDGTITALVDA
DNDGRVDKRYSIAKGLDYPEAIAFHDGALYVAEKERILRFNQVESRLKRPGRPKEVYDRLPGNSKKSRRAMRFGPDGLLY
IAIGAPCNVCESEAPYSSILAIDVDTGASEQIVSGVRKVLAFDWSVEDKQLWFADNGRDWMGDNLPPDEINKVERKGSHF
GFPYIHATDIIEPAYDKPKNLKVVAPRYELPAHVGAKGLHFYRGKQFPERFHNQMFVAENGSWNRSSKVGYQVVMLEIKD
DQVIKRSTVVSFLDGEFPVARPYALVTAPDGAMYISDDLKGNIYRLFYKDSAKNQSQDND

Sequences:

>Translated_380_residues
MTFENYRNQIAVGMSLLCAHFIFSCSTLAAEPVMITVSKGFGLTLYASDLGDAKQLAVGDKGTLFVGSYRDGTITALVDA
DNDGRVDKRYSIAKGLDYPEAIAFHDGALYVAEKERILRFNQVESRLKRPGRPKEVYDRLPGNSKKSRRAMRFGPDGLLY
IAIGAPCNVCESEAPYSSILAIDVDTGASEQIVSGVRKVLAFDWSVEDKQLWFADNGRDWMGDNLPPDEINKVERKGSHF
GFPYIHATDIIEPAYDKPKNLKVVAPRYELPAHVGAKGLHFYRGKQFPERFHNQMFVAENGSWNRSSKVGYQVVMLEIKD
DQVIKRSTVVSFLDGEFPVARPYALVTAPDGAMYISDDLKGNIYRLFYKDSAKNQSQDND
>Mature_379_residues
TFENYRNQIAVGMSLLCAHFIFSCSTLAAEPVMITVSKGFGLTLYASDLGDAKQLAVGDKGTLFVGSYRDGTITALVDAD
NDGRVDKRYSIAKGLDYPEAIAFHDGALYVAEKERILRFNQVESRLKRPGRPKEVYDRLPGNSKKSRRAMRFGPDGLLYI
AIGAPCNVCESEAPYSSILAIDVDTGASEQIVSGVRKVLAFDWSVEDKQLWFADNGRDWMGDNLPPDEINKVERKGSHFG
FPYIHATDIIEPAYDKPKNLKVVAPRYELPAHVGAKGLHFYRGKQFPERFHNQMFVAENGSWNRSSKVGYQVVMLEIKDD
QVIKRSTVVSFLDGEFPVARPYALVTAPDGAMYISDDLKGNIYRLFYKDSAKNQSQDND

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42470; Mature: 42338

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFENYRNQIAVGMSLLCAHFIFSCSTLAAEPVMITVSKGFGLTLYASDLGDAKQLAVGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCEEEECC
KGTLFVGSYRDGTITALVDADNDGRVDKRYSIAKGLDYPEAIAFHDGALYVAEKERILRF
CCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHCCCCCHHEEEECCEEEEECHHHHHHH
NQVESRLKRPGRPKEVYDRLPGNSKKSRRAMRFGPDGLLYIAIGAPCNVCESEAPYSSIL
HHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCEEE
AIDVDTGASEQIVSGVRKVLAFDWSVEDKQLWFADNGRDWMGDNLPPDEINKVERKGSHF
EEEECCCCHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC
GFPYIHATDIIEPAYDKPKNLKVVAPRYELPAHVGAKGLHFYRGKQFPERFHNQMFVAEN
CCCEEEHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCEEEEEEC
GSWNRSSKVGYQVVMLEIKDDQVIKRSTVVSFLDGEFPVARPYALVTAPDGAMYISDDLK
CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCC
GNIYRLFYKDSAKNQSQDND
CCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TFENYRNQIAVGMSLLCAHFIFSCSTLAAEPVMITVSKGFGLTLYASDLGDAKQLAVGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCEEEECC
KGTLFVGSYRDGTITALVDADNDGRVDKRYSIAKGLDYPEAIAFHDGALYVAEKERILRF
CCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHCCCCCHHEEEECCEEEEECHHHHHHH
NQVESRLKRPGRPKEVYDRLPGNSKKSRRAMRFGPDGLLYIAIGAPCNVCESEAPYSSIL
HHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCEEE
AIDVDTGASEQIVSGVRKVLAFDWSVEDKQLWFADNGRDWMGDNLPPDEINKVERKGSHF
EEEECCCCHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC
GFPYIHATDIIEPAYDKPKNLKVVAPRYELPAHVGAKGLHFYRGKQFPERFHNQMFVAEN
CCCEEEHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCEEEEEEC
GSWNRSSKVGYQVVMLEIKDDQVIKRSTVVSFLDGEFPVARPYALVTAPDGAMYISDDLK
CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCC
GNIYRLFYKDSAKNQSQDND
CCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]