The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625546

Identifier: 167625546

GI number: 167625546

Start: 4437881

End: 4438336

Strand: Reverse

Name: 167625546

Synonym: Shal_3640

Alternate gene names: NA

Gene position: 4438336-4437881 (Counterclockwise)

Preceding gene: 167625547

Following gene: 167625545

Centisome position: 84.91

GC content: 38.82

Gene sequence:

>456_bases
ATGCGTATTCAACAACTCAGTGAACTTTTAGGTTATGTTGCAACATGCCGCATAGAAATGGCGCAGCTTTATAAGCGTTT
ACATACTCAAGCTGACTCTTCTCGAGTAAAGTTAATGTTAGAGTATTTTCAACAGCATGAGCGACACACCGCTGAGAAGT
TAGAAAACTATATCGATGAAGCGCCTAAGAAAATTATTGATACTTGGTACAAAGATATTGTATTTGAAGATTTTATCGCT
AATTGCCACCAGTTAACCTTGCCAGCGAGCATGAGTGAAGACGATGTATTAGAGCTGCATCTTGGTCTGGATAATCGTTT
AATAGGCCTGTTAGAAAAAACGGCTAACTCTTCGGCGACTACTGAAACAAAAGGTGCGTTAGAGGATTTAGTGAGAGTGG
AAAAAATTCAACAACAACGTCTAGTTCATAGCACTATTCGCATGGATGATATCTAA

Upstream 100 bases:

>100_bases
TTGACAGTGTTCAAATATTGAGTCGACTTTTCATACCATAATTATCAAAGACTAAAATTTAGGCAAGTCACATAGAGTGG
CTGATTTAGGAGAGCGATCA

Downstream 100 bases:

>100_bases
CGGCTTATATCCGCTTAGCAATTATTCGCTTGGCAATCAGGCACCGGAAGGTGCCTTTTTTGATCGAATTTATTTACAAC
TTGCATAACTATAATTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRIQQLSELLGYVATCRIEMAQLYKRLHTQADSSRVKLMLEYFQQHERHTAEKLENYIDEAPKKIIDTWYKDIVFEDFIA
NCHQLTLPASMSEDDVLELHLGLDNRLIGLLEKTANSSATTETKGALEDLVRVEKIQQQRLVHSTIRMDDI

Sequences:

>Translated_151_residues
MRIQQLSELLGYVATCRIEMAQLYKRLHTQADSSRVKLMLEYFQQHERHTAEKLENYIDEAPKKIIDTWYKDIVFEDFIA
NCHQLTLPASMSEDDVLELHLGLDNRLIGLLEKTANSSATTETKGALEDLVRVEKIQQQRLVHSTIRMDDI
>Mature_151_residues
MRIQQLSELLGYVATCRIEMAQLYKRLHTQADSSRVKLMLEYFQQHERHTAEKLENYIDEAPKKIIDTWYKDIVFEDFIA
NCHQLTLPASMSEDDVLELHLGLDNRLIGLLEKTANSSATTETKGALEDLVRVEKIQQQRLVHSTIRMDDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17560; Mature: 17560

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQQLSELLGYVATCRIEMAQLYKRLHTQADSSRVKLMLEYFQQHERHTAEKLENYIDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APKKIIDTWYKDIVFEDFIANCHQLTLPASMSEDDVLELHLGLDNRLIGLLEKTANSSAT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCC
TETKGALEDLVRVEKIQQQRLVHSTIRMDDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIQQLSELLGYVATCRIEMAQLYKRLHTQADSSRVKLMLEYFQQHERHTAEKLENYIDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APKKIIDTWYKDIVFEDFIANCHQLTLPASMSEDDVLELHLGLDNRLIGLLEKTANSSAT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCC
TETKGALEDLVRVEKIQQQRLVHSTIRMDDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA