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The map label for this gene is yjeF [H]

Identifier: 167625545

GI number: 167625545

Start: 4436196

End: 4437674

Strand: Reverse

Name: yjeF [H]

Synonym: Shal_3639

Alternate gene names: 167625545

Gene position: 4437674-4436196 (Counterclockwise)

Preceding gene: 167625546

Following gene: 167625544

Centisome position: 84.9

GC content: 48.14

Gene sequence:

>1479_bases
ATGAGTGAGCGAAACTTACAGACAACGCCTTTATTTCTAGCTGAGCAGATTAGAACAGCTGAAATTAATGCTGTTAATAT
TGGTAACGTGACCTTATATCAATTGGTTGAAAGAGCTGGAGCTGCTGCTTTTCAGTTGATAAGTGAAAGGCAAGCAAATG
CAGATGAAATACTCGTTCTCGCGGGCCATGGCAATAACGGAGCCGATGCGTATGTGACGGCGGCCTTGCTATTGGAGGCT
GGTTTTGACGTTATCTTGCAAGCAAGCACAGCGACTCGTCCAAGCGAAGAACTAAAACAGGCTATCCAATGCTTCATCAA
GTCTGGTGGAGAGATCTGTGAGTTTAGTGAATCACAGATTGAACAGGCTGGGGTTATTGTAGATGGCTTGCTAGGAACTG
GAGTTTGCGGAGAGCTAAATGCTGAGCTGGCAAACATTATTAATGCGGTAAATAGAAGTCATGCATGGGTGCTGAGTCTT
GATGTTCCGTCTGGGCTTAATCCTGACGCGGGCAACTATACAACCACAGCAATAGAAGCGAATACCACTTTGACTTTTGC
TGGTATTAAACAAGGCTTACTTACAGGAAAAGCCCGCCATTGCTGCGGTGAGCTGATCCTTGCTGAGTTAGGGCTCGGTG
AGTTTTTAACTGTATCGAGTGCACAGCAGATGAGCTGTCAAACGCTGACTAATGCTTTTTTACCCCGCCGTAGGGATGCT
CACAAAGGTGATTGCGGCAAAGTGTCGATAATCGGTGGCGACTACGGTATGGCTGGGGCGGTGCGGCTTGCGGCTGAAGG
GTGCCTAAGAAGCGGAGCGGGTTTAGTTACCGTTATTTCAAGGCCTGAGCACCAACTTGTCGTGAGTGTAAGTCGACCAG
AGCTGATGTTTTGGGGTTGTGAACTGGTCGACATGGAAGTTTACCTAAAATTAGGTTGGGCCTCAGTATTAGTCATAGGA
CCAGGGCTTGGGCTCAGTGATTGGGGTTATAACTTACTTAAGGCGGTTGATCTTAGTGATAAGCCCTGCGTGATTGATGC
CGATGGTCTCAATCAGCTAAAGACAATGCCGATGACGGGCAAAGACTGGGTGCTGACGCCTCATCCAGGTGAGGCGGCGA
GGTTGCTGGATCTGAGTATTACAGAAGTTGAGCAAGATAGGTTTAACGCCGTTAGGCTACTGCAGCAGAAATATGGCGGA
GTGATTGTACTCAAAGGCCCTGGAACAATTATCTACAATGGTGACAAGTGTATTGTGGCTCCAGTGGGAAATCCAGGCTT
AGCCAGTGGTGGTTGCGGTGATGTGCTTGCTGGTGTGATTGGTGGACTAATGGCGCAGGGGTACACGAGTATGGAAGCGG
CTTGTCTAGGAGTTGTGATCCACGGAGATGCAGCTGATTTGGCGGCGAAATCAGGTGAGCGAGGCATGTTAGCTAGCGAT
TTGATGCCTTATATTCGTCAGTTAGTTAATGAAATCTAG

Upstream 100 bases:

>100_bases
AAACTTAGGTCATCTATTCGCTGTTATCGATTCATTTGCACTTAAGCCAAGGCCTTTAATCTACTAGATTAAATACAACC
CATACATTAGGAACTGAAAT

Downstream 100 bases:

>100_bases
TTTAGAAACCTAGATGATTAGGTTAAAGTACTGCATTCTACGCCCAATTTTATTTAGGACGCTTTTCGATTCAGAATGAA
TACGCAATCAATGATATTAA

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSERNLQTTPLFLAEQIRTAEINAVNIGNVTLYQLVERAGAAAFQLISERQANADEILVLAGHGNNGADAYVTAALLLEA
GFDVILQASTATRPSEELKQAIQCFIKSGGEICEFSESQIEQAGVIVDGLLGTGVCGELNAELANIINAVNRSHAWVLSL
DVPSGLNPDAGNYTTTAIEANTTLTFAGIKQGLLTGKARHCCGELILAELGLGEFLTVSSAQQMSCQTLTNAFLPRRRDA
HKGDCGKVSIIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLVVSVSRPELMFWGCELVDMEVYLKLGWASVLVIG
PGLGLSDWGYNLLKAVDLSDKPCVIDADGLNQLKTMPMTGKDWVLTPHPGEAARLLDLSITEVEQDRFNAVRLLQQKYGG
VIVLKGPGTIIYNGDKCIVAPVGNPGLASGGCGDVLAGVIGGLMAQGYTSMEAACLGVVIHGDAADLAAKSGERGMLASD
LMPYIRQLVNEI

Sequences:

>Translated_492_residues
MSERNLQTTPLFLAEQIRTAEINAVNIGNVTLYQLVERAGAAAFQLISERQANADEILVLAGHGNNGADAYVTAALLLEA
GFDVILQASTATRPSEELKQAIQCFIKSGGEICEFSESQIEQAGVIVDGLLGTGVCGELNAELANIINAVNRSHAWVLSL
DVPSGLNPDAGNYTTTAIEANTTLTFAGIKQGLLTGKARHCCGELILAELGLGEFLTVSSAQQMSCQTLTNAFLPRRRDA
HKGDCGKVSIIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLVVSVSRPELMFWGCELVDMEVYLKLGWASVLVIG
PGLGLSDWGYNLLKAVDLSDKPCVIDADGLNQLKTMPMTGKDWVLTPHPGEAARLLDLSITEVEQDRFNAVRLLQQKYGG
VIVLKGPGTIIYNGDKCIVAPVGNPGLASGGCGDVLAGVIGGLMAQGYTSMEAACLGVVIHGDAADLAAKSGERGMLASD
LMPYIRQLVNEI
>Mature_491_residues
SERNLQTTPLFLAEQIRTAEINAVNIGNVTLYQLVERAGAAAFQLISERQANADEILVLAGHGNNGADAYVTAALLLEAG
FDVILQASTATRPSEELKQAIQCFIKSGGEICEFSESQIEQAGVIVDGLLGTGVCGELNAELANIINAVNRSHAWVLSLD
VPSGLNPDAGNYTTTAIEANTTLTFAGIKQGLLTGKARHCCGELILAELGLGEFLTVSSAQQMSCQTLTNAFLPRRRDAH
KGDCGKVSIIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLVVSVSRPELMFWGCELVDMEVYLKLGWASVLVIGP
GLGLSDWGYNLLKAVDLSDKPCVIDADGLNQLKTMPMTGKDWVLTPHPGEAARLLDLSITEVEQDRFNAVRLLQQKYGGV
IVLKGPGTIIYNGDKCIVAPVGNPGLASGGCGDVLAGVIGGLMAQGYTSMEAACLGVVIHGDAADLAAKSGERGMLASDL
MPYIRQLVNEI

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=235, Percent_Identity=32.3404255319149, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI1790609, Length=501, Percent_Identity=42.9141716566866, Blast_Score=370, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI17554656, Length=218, Percent_Identity=32.1100917431193, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51795; Mature: 51664

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERNLQTTPLFLAEQIRTAEINAVNIGNVTLYQLVERAGAAAFQLISERQANADEILVL
CCCCCCCCCHHHHHHHHHHEEEEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEE
AGHGNNGADAYVTAALLLEAGFDVILQASTATRPSEELKQAIQCFIKSGGEICEFSESQI
EECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCHHHH
EQAGVIVDGLLGTGVCGELNAELANIINAVNRSHAWVLSLDVPSGLNPDAGNYTTTAIEA
HHCCEEEECHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEC
NTTLTFAGIKQGLLTGKARHCCGELILAELGLGEFLTVSSAQQMSCQTLTNAFLPRRRDA
CCEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCC
HKGDCGKVSIIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLVVSVSRPELMFWGC
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCEEEECC
ELVDMEVYLKLGWASVLVIGPGLGLSDWGYNLLKAVDLSDKPCVIDADGLNQLKTMPMTG
EEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHEEECCCCCCEEEECCCCCHHHCCCCCC
KDWVLTPHPGEAARLLDLSITEVEQDRFNAVRLLQQKYGGVIVLKGPGTIIYNGDKCIVA
CCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCEEEEE
PVGNPGLASGGCGDVLAGVIGGLMAQGYTSMEAACLGVVIHGDAADLAAKSGERGMLASD
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCEEEEEEEEECCHHHHHHCCCCCCCHHHH
LMPYIRQLVNEI
HHHHHHHHHHCC
>Mature Secondary Structure 
SERNLQTTPLFLAEQIRTAEINAVNIGNVTLYQLVERAGAAAFQLISERQANADEILVL
CCCCCCCCHHHHHHHHHHEEEEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEE
AGHGNNGADAYVTAALLLEAGFDVILQASTATRPSEELKQAIQCFIKSGGEICEFSESQI
EECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCHHHH
EQAGVIVDGLLGTGVCGELNAELANIINAVNRSHAWVLSLDVPSGLNPDAGNYTTTAIEA
HHCCEEEECHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEC
NTTLTFAGIKQGLLTGKARHCCGELILAELGLGEFLTVSSAQQMSCQTLTNAFLPRRRDA
CCEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCC
HKGDCGKVSIIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLVVSVSRPELMFWGC
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCEEEECC
ELVDMEVYLKLGWASVLVIGPGLGLSDWGYNLLKAVDLSDKPCVIDADGLNQLKTMPMTG
EEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHEEECCCCCCEEEECCCCCHHHCCCCCC
KDWVLTPHPGEAARLLDLSITEVEQDRFNAVRLLQQKYGGVIVLKGPGTIIYNGDKCIVA
CCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCEEEEE
PVGNPGLASGGCGDVLAGVIGGLMAQGYTSMEAACLGVVIHGDAADLAAKSGERGMLASD
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCEEEEEEEEECCHHHHHHCCCCCCCHHHH
LMPYIRQLVNEI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]