Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yjeE [H]

Identifier: 167625544

GI number: 167625544

Start: 4435638

End: 4436120

Strand: Reverse

Name: yjeE [H]

Synonym: Shal_3638

Alternate gene names: 167625544

Gene position: 4436120-4435638 (Counterclockwise)

Preceding gene: 167625545

Following gene: 167625543

Centisome position: 84.87

GC content: 39.54

Gene sequence:

>483_bases
ATGAATACGCAATCAATGATATTAAATTTAAATGATGAACAAGAAACAGTAGATTTAGGGACAAAGCTTGCAGGTCTTAT
TACTCCTCCTTTAACTGTTTATTTAAGCGGCGATCTTGGTGCGGGTAAGACGACCTTTAGCCGTGGACTTATTCAAAGTT
TAGGGCATCAAGGAGCAGTAAAGAGCCCGACCTATACCTTGGTAGAACCCTATGAGTTAGATGCGTTAGACGTGTATCAT
TTCGATCTCTATCGTTTATATGATCCTGAAGAATTAGAGTTTATGGGGATCCGTGATTACTTTACCTCGCGCAGCTTATG
TATCGTAGAGTGGCCTGATCGCGGCCATGGTTTATTACCCCCTGCTGATATACATATCCATATTAAATATGTTAATACTG
GACGACAAGTCGAGTTACAGGCGCTTTCTTCTGAAGGTGAAAAAATATTAGCGGCCCTAAATCATAATGATAATAAACAG
TAA

Upstream 100 bases:

>100_bases
TCGTCAGTTAGTTAATGAAATCTAGTTTAGAAACCTAGATGATTAGGTTAAAGTACTGCATTCTACGCCCAATTTTATTT
AGGACGCTTTTCGATTCAGA

Downstream 100 bases:

>100_bases
TATATTTAGACTTTTTTTACTTCTTGTTAGTTTTGGTGCTTCATTTTTTGCGCAGAGTGCGAATAAACTCGACAGCGTAA
GAATTTGGGCTGCGCCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNTQSMILNLNDEQETVDLGTKLAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAVKSPTYTLVEPYELDALDVYH
FDLYRLYDPEELEFMGIRDYFTSRSLCIVEWPDRGHGLLPPADIHIHIKYVNTGRQVELQALSSEGEKILAALNHNDNKQ

Sequences:

>Translated_160_residues
MNTQSMILNLNDEQETVDLGTKLAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAVKSPTYTLVEPYELDALDVYH
FDLYRLYDPEELEFMGIRDYFTSRSLCIVEWPDRGHGLLPPADIHIHIKYVNTGRQVELQALSSEGEKILAALNHNDNKQ
>Mature_160_residues
MNTQSMILNLNDEQETVDLGTKLAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAVKSPTYTLVEPYELDALDVYH
FDLYRLYDPEELEFMGIRDYFTSRSLCIVEWPDRGHGLLPPADIHIHIKYVNTGRQVELQALSSEGEKILAALNHNDNKQ

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=147, Percent_Identity=62.5850340136054, Blast_Score=194, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17903; Mature: 17903

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQSMILNLNDEQETVDLGTKLAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAV
CCCCEEEEEECCCCHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
KSPTYTLVEPYELDALDVYHFDLYRLYDPEELEFMGIRDYFTSRSLCIVEWPDRGHGLLP
CCCCEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEHHHHCCCCEEEEECCCCCCCCCC
PADIHIHIKYVNTGRQVELQALSSEGEKILAALNHNDNKQ
CCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MNTQSMILNLNDEQETVDLGTKLAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAV
CCCCEEEEEECCCCHHHHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
KSPTYTLVEPYELDALDVYHFDLYRLYDPEELEFMGIRDYFTSRSLCIVEWPDRGHGLLP
CCCCEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEHHHHCCCCEEEEECCCCCCCCCC
PADIHIHIKYVNTGRQVELQALSSEGEKILAALNHNDNKQ
CCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]