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The map label for this gene is petC [H]

Identifier: 167625534

GI number: 167625534

Start: 4424808

End: 4425503

Strand: Reverse

Name: petC [H]

Synonym: Shal_3628

Alternate gene names: 167625534

Gene position: 4425503-4424808 (Counterclockwise)

Preceding gene: 167625535

Following gene: 167625533

Centisome position: 84.67

GC content: 45.4

Gene sequence:

>696_bases
ATGAAAAAATTACTGATTGCATTAGTTGCATTGGTGCCAACCTTGGCTATCGCAGCCGGGGGCGGAGCACCTCTAGAGCA
AGCTAATATTGACCTGAATGACCAGGAGTCTTTACAGCGTGGCTTGGATCTATTCCAAAATAACTGTGCAGGCTGTCATA
GTACTCAGTATCAACGTTATGAGCGTGTCGCAACAGACTTAGGCATTCCGCTTGACGAGATGCGCGCCAAGTACTTACCT
GAAGGCGCCAAGATTGGTGAGTTAATGGAGATCGCCATCCCAGATGCTGATGCAGCTAAGTGGTTCGGTGCTTCACCTCC
TGACTTAACTTTGGTTGCCCGAGTACGTGGTGAAGATTGGATTTACTCATACCTTAAGGGTTTCTATAAAGATGAAAGCC
GTCCTTTTGGTGTGAACAATACTATTTTCCCATTGGTAGGTATGCCGCATGTACTTGAAGGCCTACAAGGTCTTCCTGTT
AAACAAGAAGATGGAACGTTAGTTGCTACTGGCGGTGCGCTATCAGCTGAAGAGTATGATCAAGTGGTAAAAGATATCAC
TGGATACTTGGTTTACTCTGGCGATCCTATCAAGCTTGAGCGTGAACGCTTAGGTTGGTGGGTGATGGGCTTCCTATTTA
TTTTCTTTGTTGTGGCCTACCTCTTAAAGAAAGAGTACTGGAAAGATGTACACTAA

Upstream 100 bases:

>100_bases
CACGTATCTTCACTCTAACTTACTTTGGTTTCTTCTTATTCCTATGGGTTTACAGTAAGAATGAAAAGACTAAGCCGGTA
CCAGAGAGGTTGACACACTA

Downstream 100 bases:

>100_bases
CCCCAAATAAAGGTTAGAATGTATTATCCGCAAATTGTAAACGGGGAGCCTTGCTCCTCGTTTATGTTTGCATTTTTTGC
TTTTTATTTGTGAATCCCGG

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKKLLIALVALVPTLAIAAGGGAPLEQANIDLNDQESLQRGLDLFQNNCAGCHSTQYQRYERVATDLGIPLDEMRAKYLP
EGAKIGELMEIAIPDADAAKWFGASPPDLTLVARVRGEDWIYSYLKGFYKDESRPFGVNNTIFPLVGMPHVLEGLQGLPV
KQEDGTLVATGGALSAEEYDQVVKDITGYLVYSGDPIKLERERLGWWVMGFLFIFFVVAYLLKKEYWKDVH

Sequences:

>Translated_231_residues
MKKLLIALVALVPTLAIAAGGGAPLEQANIDLNDQESLQRGLDLFQNNCAGCHSTQYQRYERVATDLGIPLDEMRAKYLP
EGAKIGELMEIAIPDADAAKWFGASPPDLTLVARVRGEDWIYSYLKGFYKDESRPFGVNNTIFPLVGMPHVLEGLQGLPV
KQEDGTLVATGGALSAEEYDQVVKDITGYLVYSGDPIKLERERLGWWVMGFLFIFFVVAYLLKKEYWKDVH
>Mature_231_residues
MKKLLIALVALVPTLAIAAGGGAPLEQANIDLNDQESLQRGLDLFQNNCAGCHSTQYQRYERVATDLGIPLDEMRAKYLP
EGAKIGELMEIAIPDADAAKWFGASPPDLTLVARVRGEDWIYSYLKGFYKDESRPFGVNNTIFPLVGMPHVLEGLQGLPV
KQEDGTLVATGGALSAEEYDQVVKDITGYLVYSGDPIKLERERLGWWVMGFLFIFFVVAYLLKKEYWKDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24658292, Length=228, Percent_Identity=26.7543859649123, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 25701; Mature: 25701

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLIALVALVPTLAIAAGGGAPLEQANIDLNDQESLQRGLDLFQNNCAGCHSTQYQRY
CHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
ERVATDLGIPLDEMRAKYLPEGAKIGELMEIAIPDADAAKWFGASPPDLTLVARVRGEDW
HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHEECCCCCHHHHCCCCCCCEEEEEEECCCHH
IYSYLKGFYKDESRPFGVNNTIFPLVGMPHVLEGLQGLPVKQEDGTLVATGGALSAEEYD
HHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHH
QVVKDITGYLVYSGDPIKLERERLGWWVMGFLFIFFVVAYLLKKEYWKDVH
HHHHHHHCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLLIALVALVPTLAIAAGGGAPLEQANIDLNDQESLQRGLDLFQNNCAGCHSTQYQRY
CHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
ERVATDLGIPLDEMRAKYLPEGAKIGELMEIAIPDADAAKWFGASPPDLTLVARVRGEDW
HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHEECCCCCHHHHCCCCCCCEEEEEEECCCHH
IYSYLKGFYKDESRPFGVNNTIFPLVGMPHVLEGLQGLPVKQEDGTLVATGGALSAEEYD
HHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHH
QVVKDITGYLVYSGDPIKLERERLGWWVMGFLFIFFVVAYLLKKEYWKDVH
HHHHHHHCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA