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The map label for this gene is fecD [C]

Identifier: 167625529

GI number: 167625529

Start: 4419026

End: 4420072

Strand: Reverse

Name: fecD [C]

Synonym: Shal_3623

Alternate gene names: 167625529

Gene position: 4420072-4419026 (Counterclockwise)

Preceding gene: 167625530

Following gene: 167625528

Centisome position: 84.56

GC content: 49.57

Gene sequence:

>1047_bases
ATGTCAGTAGTAAAAGGCTTTTCCTTACAGCCGATCCAATGGACTGGAATTGCCATTGTCATTGCCCTGATAGGTCTTTG
TGCCGGGCGCTTCTCGATTGATCCAATTGATCTGTTTAGTGCGATTCAAAAGCTGCCATCTGTGCTCAGTAGTCTGATAA
TGACCGGACAGGTTCCCGATGATCTGACTCAAGAAGAACGGGTTATCTTACTTATTCGTTTCCCGCGCTTACTCACCGCG
CTGATTGTCGGTGCTGGGCTTGCTGTTTCTGGTGCTGTGTATCAGGGGGTATTTCGTAACCCACTTGTCTCTCCTGATAT
TCTAGGGGTGGCGTCTGGCTGTATGTTCGGTGCTGCAATGGGGTTGATTTTACCCGGTAGCAGCTGGCTTATGGTGCAGC
TGCTAGCATTTGTCTGTGGTTTATCTGCAGCTTGTGCCGCCATGTTTATGGCTAAACGCTTTGGCAGTAATAGTCTGTTG
TTGATGATTATGACTGGGATTATTGTCGGCTCAATATTTGGCGCAGGTTTGACCATGTTAAAAGCGCTGGCCGATCCTTA
TGGCGAGCTGCCTGCTATCGTATTTTGGTTAATGGGCTCTCTCTCTGTTAGCAGCTGGAGTACGGTTGCTCAGCTGATTA
TTCCAGTGGCTCTTGGTTATGGGCTTATTCACACTTTACGCTACCGTCTCAACGTGTTGTGTTTAGGCGATCATCAAAGC
CGCAGTTTAGGGGTTGAACCTGCGAGGCTGCGCTTGGTGCTAATCGTTATCAGCTCCTTTATCGTCGCCTCATGCGTCGC
AACGGTAGGGCAGGTGGCATGGATTGGCTTAGTGGTGCCGCACATGGTACGTACCTTCACTGGTGCTAACAATATGCGCT
TAATTCCTATTTCCACCGCAGTGGGAGCCATGTTTTTACTGTTAGCCGATAGCGTGGCTCGCGCGAGCTTTAGCATGGAG
ATCCCTATTGGCATCGTGACCTCATTGGTTGGCGCTCCACTGTTTGCTTTCCTGCTATTTCGTTTCCGTCAGGGAGGGGC
TTACTAA

Upstream 100 bases:

>100_bases
CTGAGCGATTTAACAATATCGATCTGGACGCTGAAATTGCGCACTACTACCGAGTCGCTTTCGGTGATGCTTGTCTATCG
CCTCTGCATGAGATGAGCAA

Downstream 100 bases:

>100_bases
TGCTGGCAGTTAATAATATTAGTTACTCAGTCGGTGAAAAATGCTTGCTAGAGGATGTCAGCTTTGAGTTAGCCTCTGGC
GAATTCTTAGCTATTTTAGG

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSVVKGFSLQPIQWTGIAIVIALIGLCAGRFSIDPIDLFSAIQKLPSVLSSLIMTGQVPDDLTQEERVILLIRFPRLLTA
LIVGAGLAVSGAVYQGVFRNPLVSPDILGVASGCMFGAAMGLILPGSSWLMVQLLAFVCGLSAACAAMFMAKRFGSNSLL
LMIMTGIIVGSIFGAGLTMLKALADPYGELPAIVFWLMGSLSVSSWSTVAQLIIPVALGYGLIHTLRYRLNVLCLGDHQS
RSLGVEPARLRLVLIVISSFIVASCVATVGQVAWIGLVVPHMVRTFTGANNMRLIPISTAVGAMFLLLADSVARASFSME
IPIGIVTSLVGAPLFAFLLFRFRQGGAY

Sequences:

>Translated_348_residues
MSVVKGFSLQPIQWTGIAIVIALIGLCAGRFSIDPIDLFSAIQKLPSVLSSLIMTGQVPDDLTQEERVILLIRFPRLLTA
LIVGAGLAVSGAVYQGVFRNPLVSPDILGVASGCMFGAAMGLILPGSSWLMVQLLAFVCGLSAACAAMFMAKRFGSNSLL
LMIMTGIIVGSIFGAGLTMLKALADPYGELPAIVFWLMGSLSVSSWSTVAQLIIPVALGYGLIHTLRYRLNVLCLGDHQS
RSLGVEPARLRLVLIVISSFIVASCVATVGQVAWIGLVVPHMVRTFTGANNMRLIPISTAVGAMFLLLADSVARASFSME
IPIGIVTSLVGAPLFAFLLFRFRQGGAY
>Mature_347_residues
SVVKGFSLQPIQWTGIAIVIALIGLCAGRFSIDPIDLFSAIQKLPSVLSSLIMTGQVPDDLTQEERVILLIRFPRLLTAL
IVGAGLAVSGAVYQGVFRNPLVSPDILGVASGCMFGAAMGLILPGSSWLMVQLLAFVCGLSAACAAMFMAKRFGSNSLLL
MIMTGIIVGSIFGAGLTMLKALADPYGELPAIVFWLMGSLSVSSWSTVAQLIIPVALGYGLIHTLRYRLNVLCLGDHQSR
SLGVEPARLRLVLIVISSFIVASCVATVGQVAWIGLVVPHMVRTFTGANNMRLIPISTAVGAMFLLLADSVARASFSMEI
PIGIVTSLVGAPLFAFLLFRFRQGGAY

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=282, Percent_Identity=36.1702127659575, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1790741, Length=311, Percent_Identity=32.7974276527331, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786805, Length=284, Percent_Identity=33.0985915492958, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788004, Length=325, Percent_Identity=32.9230769230769, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786347, Length=273, Percent_Identity=30.7692307692308, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1786804, Length=330, Percent_Identity=29.0909090909091, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36834; Mature: 36703

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVKGFSLQPIQWTGIAIVIALIGLCAGRFSIDPIDLFSAIQKLPSVLSSLIMTGQVPD
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DLTQEERVILLIRFPRLLTALIVGAGLAVSGAVYQGVFRNPLVSPDILGVASGCMFGAAM
CCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GLILPGSSWLMVQLLAFVCGLSAACAAMFMAKRFGSNSLLLMIMTGIIVGSIFGAGLTML
HHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KALADPYGELPAIVFWLMGSLSVSSWSTVAQLIIPVALGYGLIHTLRYRLNVLCLGDHQS
HHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
RSLGVEPARLRLVLIVISSFIVASCVATVGQVAWIGLVVPHMVRTFTGANNMRLIPISTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
VGAMFLLLADSVARASFSMEIPIGIVTSLVGAPLFAFLLFRFRQGGAY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVVKGFSLQPIQWTGIAIVIALIGLCAGRFSIDPIDLFSAIQKLPSVLSSLIMTGQVPD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DLTQEERVILLIRFPRLLTALIVGAGLAVSGAVYQGVFRNPLVSPDILGVASGCMFGAAM
CCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GLILPGSSWLMVQLLAFVCGLSAACAAMFMAKRFGSNSLLLMIMTGIIVGSIFGAGLTML
HHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KALADPYGELPAIVFWLMGSLSVSSWSTVAQLIIPVALGYGLIHTLRYRLNVLCLGDHQS
HHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
RSLGVEPARLRLVLIVISSFIVASCVATVGQVAWIGLVVPHMVRTFTGANNMRLIPISTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
VGAMFLLLADSVARASFSMEIPIGIVTSLVGAPLFAFLLFRFRQGGAY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]