Click here to switch to the map view.

The map label for this gene is 167625526

Identifier: 167625526

GI number: 167625526

Start: 4416173

End: 4416997

Strand: Reverse

Name: 167625526

Synonym: Shal_3620

Alternate gene names: NA

Gene position: 4416997-4416173 (Counterclockwise)

Preceding gene: 167625527

Following gene: 167625525

Centisome position: 84.5

GC content: 48.24

Gene sequence:

>825_bases
ATGAGAATGAACTGGTTATTTTCGATGCGCCTCGCCTTCGTGCTGCTAATGCTCCTATCACTGTGGTTCGCCATAGGCGT
AGCCATGAGTGAGTATGAGCTCTATCGCCAAGTGTTAAGGGCGTTAAACGATCTGCCTATGTCGCAGTGGCTACAAAGCT
TAACGGCGGCGCCCGTTGTTGGATTCTGGTTAGTAGGCCTATTTGGTTTGATGTTCCTATTAGGGTTGAATACCGCCTTG
TGTTCTTGGCGCGACCTACTGCCTACTTGGCGTAACAAGCGCTGGCGTAGCCCGCGGATCATGATGCTGCCAATTCATAT
CCTGACCTTACTGGTTTTTATATTCCATGGTGTCGATCTGGTATTTGTCCATGGTCACGATAGCGCAGTACTACATCAAG
GCGAGCGTTTCAATAGTGGTCGTTATCAGATCAAGTTAGTTAACGTCGACTACCGCGATGATGTCAGCCTAATCACCGAA
GATGAAACGGGCTTTAGCCCGGCAGGGCGGATCACACGTCGTAGTGTCGAACAGTTCGATCCTCGTAAAAATACGGCCTA
CTTTATTGTTCAAGATGGTGAGCAAAAGATCAGTGGTGATGCGGAATTTATGCGGCCCTTTAGATGGAAAGATCTGTATA
TCACAGTGACAGACTTTAGGGTCCCTCACCAAGAAGAAGCGCTAGGGGTGCAGGTCAAGGTACTTGCTGTACATAACCCG
CTAGTGAATTACTTTTTTGCCTGTTACGGCTTGCTATTAGTGAGCTTATTACTGCAAGGGCTGGTGTTTTGGCGCCGCTC
AATTAAAAAAGGAGGCCGCAGATGA

Upstream 100 bases:

>100_bases
ACCTACCTAAAGCCTGGTTCCCTAATGGGAAGGGGTTGGCTATGGGCAAAGCTGCGGTACTGGGCTTTATCTGCATATTG
ATGTTGGGGTACCGCTTGTT

Downstream 100 bases:

>100_bases
TAGGGCGTATTTATTACGGTTTGCTCACTCTTTGCTGTGTATTGCCTCTGGCAGCTTATGCATCAGAGGCAAATGATGGC
AAGCAGCCTACTGCTAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRMNWLFSMRLAFVLLMLLSLWFAIGVAMSEYELYRQVLRALNDLPMSQWLQSLTAAPVVGFWLVGLFGLMFLLGLNTAL
CSWRDLLPTWRNKRWRSPRIMMLPIHILTLLVFIFHGVDLVFVHGHDSAVLHQGERFNSGRYQIKLVNVDYRDDVSLITE
DETGFSPAGRITRRSVEQFDPRKNTAYFIVQDGEQKISGDAEFMRPFRWKDLYITVTDFRVPHQEEALGVQVKVLAVHNP
LVNYFFACYGLLLVSLLLQGLVFWRRSIKKGGRR

Sequences:

>Translated_274_residues
MRMNWLFSMRLAFVLLMLLSLWFAIGVAMSEYELYRQVLRALNDLPMSQWLQSLTAAPVVGFWLVGLFGLMFLLGLNTAL
CSWRDLLPTWRNKRWRSPRIMMLPIHILTLLVFIFHGVDLVFVHGHDSAVLHQGERFNSGRYQIKLVNVDYRDDVSLITE
DETGFSPAGRITRRSVEQFDPRKNTAYFIVQDGEQKISGDAEFMRPFRWKDLYITVTDFRVPHQEEALGVQVKVLAVHNP
LVNYFFACYGLLLVSLLLQGLVFWRRSIKKGGRR
>Mature_274_residues
MRMNWLFSMRLAFVLLMLLSLWFAIGVAMSEYELYRQVLRALNDLPMSQWLQSLTAAPVVGFWLVGLFGLMFLLGLNTAL
CSWRDLLPTWRNKRWRSPRIMMLPIHILTLLVFIFHGVDLVFVHGHDSAVLHQGERFNSGRYQIKLVNVDYRDDVSLITE
DETGFSPAGRITRRSVEQFDPRKNTAYFIVQDGEQKISGDAEFMRPFRWKDLYITVTDFRVPHQEEALGVQVKVLAVHNP
LVNYFFACYGLLLVSLLLQGLVFWRRSIKKGGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31902; Mature: 31902

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNWLFSMRLAFVLLMLLSLWFAIGVAMSEYELYRQVLRALNDLPMSQWLQSLTAAPVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GFWLVGLFGLMFLLGLNTALCSWRDLLPTWRNKRWRSPRIMMLPIHILTLLVFIFHGVDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCEE
VFVHGHDSAVLHQGERFNSGRYQIKLVNVDYRDDVSLITEDETGFSPAGRITRRSVEQFD
EEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHCC
PRKNTAYFIVQDGEQKISGDAEFMRPFRWKDLYITVTDFRVPHQEEALGVQVKVLAVHNP
CCCCCEEEEEECCCHHHCCCHHHHCCCCCCEEEEEEEECCCCCCHHHCCEEEEEEEECCH
LVNYFFACYGLLLVSLLLQGLVFWRRSIKKGGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRMNWLFSMRLAFVLLMLLSLWFAIGVAMSEYELYRQVLRALNDLPMSQWLQSLTAAPVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GFWLVGLFGLMFLLGLNTALCSWRDLLPTWRNKRWRSPRIMMLPIHILTLLVFIFHGVDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCEE
VFVHGHDSAVLHQGERFNSGRYQIKLVNVDYRDDVSLITEDETGFSPAGRITRRSVEQFD
EEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHCC
PRKNTAYFIVQDGEQKISGDAEFMRPFRWKDLYITVTDFRVPHQEEALGVQVKVLAVHNP
CCCCCEEEEEECCCHHHCCCHHHHCCCCCCEEEEEEEECCCCCCHHHCCEEEEEEEECCH
LVNYFFACYGLLLVSLLLQGLVFWRRSIKKGGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA