| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cysH [H]
Identifier: 167625449
GI number: 167625449
Start: 4318765
End: 4319535
Strand: Reverse
Name: cysH [H]
Synonym: Shal_3541
Alternate gene names: 167625449
Gene position: 4319535-4318765 (Counterclockwise)
Preceding gene: 167625450
Following gene: 167625448
Centisome position: 82.64
GC content: 47.86
Gene sequence:
>771_bases ATGGTTGATACTCATAATATTGCTGATCCGGTGATTACATCAACTGCGCTCAAGGCGTTATTGAGCGCGCCTAAAGTAGA GCAGCAAGCAGAATTAAAGCGAGTCAATGAGTTTTTGGCTCAGCTGACACCGATTGAGCGGGTGCGCTGGGGATTAAATT ACTTGCCGGGTAATCATGGGTTATCGTCAAGTTTTGGGATCCAAGCGGCGGTAATGCTGCATATGGTTAGCGCTGAAAAA GCGGATATCCCAGTGCTGCTCACCGATACCGGTTACCTCTTTAGCGAAACCTATCAATTTATCGATGAGTTGACCGCAAG GCTATCGCTTAATCTCAAGGTGTATGCATCGCCTTATAGCGCTGCGTGGCAAGAGGCGCGCTTTGGTAAGTTGTGGGAGC AAGACCTAGACGGTTTGGATAAATATAACCAGATCAACAAAGTTGAGCCTATGCAACGAGCCTTGGCTGAGCAAGAGATT GGCACTTGGTTTGCCGGGTTGAGGCGTTCTCAATCGAGTACTCGTGAGGCTCTGCCGATTTTGGCGATTCACGGCCAGCG CTACAAAATCCTGCCAATTATCGATTGGAACAATAAACAGGTGCATGAGTATTTAACCGAGTTTGAACTGCCTTACCACC CATTATGGGAGCAAGGTTATGTCTCTGTGGGCGACACCCATTCGAGTAAGCCGCTAGAGCTGGGAATGAGTGAAGAGGAG ACGCGTTTTAATGGATTAAAGCGTGAATGTGGTCTGCACTACGATATCTAA
Upstream 100 bases:
>100_bases GCACAATATGCTTCACAGCGCCAAGCGGGTGAAACGTTTGGTAACTACACCGTGCGTAGCGGCGTTGTTGCGGCTGTAAA TGATGCGGCTAAGGACTTTC
Downstream 100 bases:
>100_bases TCTTGCAGTTAGAATGGCTCAGGTTATCGAGTTGCTAAGTGGCACAATCGTACCACTTGCGGCGCATGATTATAATGTTG CATGCAAAATGCCATTTTTT
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MVDTHNIADPVITSTALKALLSAPKVEQQAELKRVNEFLAQLTPIERVRWGLNYLPGNHGLSSSFGIQAAVMLHMVSAEK ADIPVLLTDTGYLFSETYQFIDELTARLSLNLKVYASPYSAAWQEARFGKLWEQDLDGLDKYNQINKVEPMQRALAEQEI GTWFAGLRRSQSSTREALPILAIHGQRYKILPIIDWNNKQVHEYLTEFELPYHPLWEQGYVSVGDTHSSKPLELGMSEEE TRFNGLKRECGLHYDI
Sequences:
>Translated_256_residues MVDTHNIADPVITSTALKALLSAPKVEQQAELKRVNEFLAQLTPIERVRWGLNYLPGNHGLSSSFGIQAAVMLHMVSAEK ADIPVLLTDTGYLFSETYQFIDELTARLSLNLKVYASPYSAAWQEARFGKLWEQDLDGLDKYNQINKVEPMQRALAEQEI GTWFAGLRRSQSSTREALPILAIHGQRYKILPIIDWNNKQVHEYLTEFELPYHPLWEQGYVSVGDTHSSKPLELGMSEEE TRFNGLKRECGLHYDI >Mature_256_residues MVDTHNIADPVITSTALKALLSAPKVEQQAELKRVNEFLAQLTPIERVRWGLNYLPGNHGLSSSFGIQAAVMLHMVSAEK ADIPVLLTDTGYLFSETYQFIDELTARLSLNLKVYASPYSAAWQEARFGKLWEQDLDGLDKYNQINKVEPMQRALAEQEI GTWFAGLRRSQSSTREALPILAIHGQRYKILPIIDWNNKQVHEYLTEFELPYHPLWEQGYVSVGDTHSSKPLELGMSEEE TRFNGLKRECGLHYDI
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=242, Percent_Identity=60.3305785123967, Blast_Score=302, Evalue=2e-83, Organism=Saccharomyces cerevisiae, GI6325425, Length=239, Percent_Identity=34.3096234309623, Blast_Score=111, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR011800 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 29149; Mature: 29149
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDTHNIADPVITSTALKALLSAPKVEQQAELKRVNEFLAQLTPIERVRWGLNYLPGNHG CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC LSSSFGIQAAVMLHMVSAEKADIPVLLTDTGYLFSETYQFIDELTARLSLNLKVYASPYS CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH AAWQEARFGKLWEQDLDGLDKYNQINKVEPMQRALAEQEIGTWFAGLRRSQSSTREALPI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LAIHGQRYKILPIIDWNNKQVHEYLTEFELPYHPLWEQGYVSVGDTHSSKPLELGMSEEE EEECCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEECCCCHHH TRFNGLKRECGLHYDI HHHHHHHHHCCCCCCC >Mature Secondary Structure MVDTHNIADPVITSTALKALLSAPKVEQQAELKRVNEFLAQLTPIERVRWGLNYLPGNHG CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC LSSSFGIQAAVMLHMVSAEKADIPVLLTDTGYLFSETYQFIDELTARLSLNLKVYASPYS CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH AAWQEARFGKLWEQDLDGLDKYNQINKVEPMQRALAEQEIGTWFAGLRRSQSSTREALPI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LAIHGQRYKILPIIDWNNKQVHEYLTEFELPYHPLWEQGYVSVGDTHSSKPLELGMSEEE EEECCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEECCCCHHH TRFNGLKRECGLHYDI HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]