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The map label for this gene is hemG [H]

Identifier: 167625433

GI number: 167625433

Start: 4298539

End: 4299072

Strand: Reverse

Name: hemG [H]

Synonym: Shal_3525

Alternate gene names: 167625433

Gene position: 4299072-4298539 (Counterclockwise)

Preceding gene: 167625434

Following gene: 167625432

Centisome position: 82.25

GC content: 42.7

Gene sequence:

>534_bases
GTGAGCAAAATTCTTATCGTTTATTCAAGTGTACATGGCCAGACACGTAAAATTTGCGGTCATCTGGAAGACAAACTGAA
AGCGGTTGGCAACTGTGTCACGGCTGTCAATATTGCCGATAAAGTGGACTTAGGGGAATTTGACAAGATCATTATCGGGG
CGAGTATTCGCCACGGCAAACATAATCCTGCTGTTTATGATTTTATTGACGCTCATAAGGCCGAACTTGAGCAGAAGCCG
AGTAGCTTCTTTTCGGTTAACTTAGTGGCGCGTAAACCACTAAAAAATACTGCAGAGACTAACCCTTATATGCGTGCATT
CTTTGAAAAGTCGTCTTGGGTTCCCGATTTGGCAGAAGTGTTTGGCGGTAACTTAAATTACCCTAGCTATGGCTCGATGG
ATAGAAGCATTATCCGCTTTATTATGTGGATCACTAAGGGACCAACTGCAGCAGATACCAATATTGAATATACTGATTGG
AATAAGGTTGATACCTACGCCGACAGTATTCATCAGTTGGCGGTTACGGTTTAA

Upstream 100 bases:

>100_bases
GCACCTCGTGATCTGTTTCATGTAATCTTCTAACTAAATCACCTATGATTTATTTATTAATTTTATTCTCTTTCAATTTT
GATCTTATAGGAGACGTCTG

Downstream 100 bases:

>100_bases
AAAGTACAGGACGAGATATGGCACAGTCGACGTTTAAACGCTTAGCGAGAAAGTATATTGATTTGCAGCATGTGCTAATC
ATTATTACCAGCGCCTATCT

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSKILIVYSSVHGQTRKICGHLEDKLKAVGNCVTAVNIADKVDLGEFDKIIIGASIRHGKHNPAVYDFIDAHKAELEQKP
SSFFSVNLVARKPLKNTAETNPYMRAFFEKSSWVPDLAEVFGGNLNYPSYGSMDRSIIRFIMWITKGPTAADTNIEYTDW
NKVDTYADSIHQLAVTV

Sequences:

>Translated_177_residues
MSKILIVYSSVHGQTRKICGHLEDKLKAVGNCVTAVNIADKVDLGEFDKIIIGASIRHGKHNPAVYDFIDAHKAELEQKP
SSFFSVNLVARKPLKNTAETNPYMRAFFEKSSWVPDLAEVFGGNLNYPSYGSMDRSIIRFIMWITKGPTAADTNIEYTDW
NKVDTYADSIHQLAVTV
>Mature_176_residues
SKILIVYSSVHGQTRKICGHLEDKLKAVGNCVTAVNIADKVDLGEFDKIIIGASIRHGKHNPAVYDFIDAHKAELEQKPS
SFFSVNLVARKPLKNTAETNPYMRAFFEKSSWVPDLAEVFGGNLNYPSYGSMDRSIIRFIMWITKGPTAADTNIEYTDWN
KVDTYADSIHQLAVTV

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=173, Percent_Identity=40.4624277456647, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 19798; Mature: 19667

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKILIVYSSVHGQTRKICGHLEDKLKAVGNCVTAVNIADKVDLGEFDKIIIGASIRHGK
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECEECCCC
HNPAVYDFIDAHKAELEQKPSSFFSVNLVARKPLKNTAETNPYMRAFFEKSSWVPDLAEV
CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
FGGNLNYPSYGSMDRSIIRFIMWITKGPTAADTNIEYTDWNKVDTYADSIHQLAVTV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKILIVYSSVHGQTRKICGHLEDKLKAVGNCVTAVNIADKVDLGEFDKIIIGASIRHGK
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECEECCCC
HNPAVYDFIDAHKAELEQKPSSFFSVNLVARKPLKNTAETNPYMRAFFEKSSWVPDLAEV
CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
FGGNLNYPSYGSMDRSIIRFIMWITKGPTAADTNIEYTDWNKVDTYADSIHQLAVTV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]