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The map label for this gene is hdeD [C]

Identifier: 167625362

GI number: 167625362

Start: 4205134

End: 4205691

Strand: Reverse

Name: hdeD [C]

Synonym: Shal_3451

Alternate gene names: 167625362

Gene position: 4205691-4205134 (Counterclockwise)

Preceding gene: 167625363

Following gene: 167625361

Centisome position: 80.46

GC content: 41.04

Gene sequence:

>558_bases
ATGGAAAACCCAGTAAATACTATGCTGACTAAAGGCTGGAAATGGTTTGTCATTGTTGGCGTGATTGTTACCCTTGCCGG
CTTTTTTGCTATAAGCCTACCAGTTGCTGCGGGAATGACGATTACTACCATTATTGGCGCAATCTTTTTGGTTATTGGTC
TGGTGCAGCTATATCACACCTTGAGTATCCCAAAATGGAAAGCCAAGTTTTGGTACGTCATTAGTGCTCTGTTTTATCTT
ATTGGTGGCATACTCATTCTCGCCGAGCCCTTTGTTGGTCTATTTACCATTACGGTAATGATGATCACTATCATGATGTT
TAACGGGGTGACGAGGATGTTTTTTGGCTTCAATAGCCGTGGCCATTTAGAGGGATGGCGCTGGATTGTGTTCAGTGGTT
TGTTGTCTACAGCTATTGCGGTTTACTTTTTTACTTTAATGAACAATCCTGAATTTTCACTATCTCTTTTAGGGATCTTC
ATGGGTGTCTCTTTCATCTTTGAAGGGATTAGTTTTATCTTCATCGGGGTACAGATGAAAAATGTTGCCGCTAAATAG

Upstream 100 bases:

>100_bases
TATTGAGCAAGCTATTTCAACAGGAGTCGAACAGTTAATTCGTGACTCTGAATTCTTAATGTAAACTCAGTTTAATCACT
TGATTGTTAAAGGATATAAT

Downstream 100 bases:

>100_bases
TCATTTAAGCTGACGTGGCGTTAGCACAGCTAGACGTATACTAGCTGTGCTTTTTATCGCGCTATGTTTGTAACAAAAGT
ATTTTCCTTTCGCTGTAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MENPVNTMLTKGWKWFVIVGVIVTLAGFFAISLPVAAGMTITTIIGAIFLVIGLVQLYHTLSIPKWKAKFWYVISALFYL
IGGILILAEPFVGLFTITVMMITIMMFNGVTRMFFGFNSRGHLEGWRWIVFSGLLSTAIAVYFFTLMNNPEFSLSLLGIF
MGVSFIFEGISFIFIGVQMKNVAAK

Sequences:

>Translated_185_residues
MENPVNTMLTKGWKWFVIVGVIVTLAGFFAISLPVAAGMTITTIIGAIFLVIGLVQLYHTLSIPKWKAKFWYVISALFYL
IGGILILAEPFVGLFTITVMMITIMMFNGVTRMFFGFNSRGHLEGWRWIVFSGLLSTAIAVYFFTLMNNPEFSLSLLGIF
MGVSFIFEGISFIFIGVQMKNVAAK
>Mature_185_residues
MENPVNTMLTKGWKWFVIVGVIVTLAGFFAISLPVAAGMTITTIIGAIFLVIGLVQLYHTLSIPKWKAKFWYVISALFYL
IGGILILAEPFVGLFTITVMMITIMMFNGVTRMFFGFNSRGHLEGWRWIVFSGLLSTAIAVYFFTLMNNPEFSLSLLGIF
MGVSFIFEGISFIFIGVQMKNVAAK

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20651; Mature: 20651

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPVNTMLTKGWKWFVIVGVIVTLAGFFAISLPVAAGMTITTIIGAIFLVIGLVQLYHT
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSIPKWKAKFWYVISALFYLIGGILILAEPFVGLFTITVMMITIMMFNGVTRMFFGFNSR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHLEGWRWIVFSGLLSTAIAVYFFTLMNNPEFSLSLLGIFMGVSFIFEGISFIFIGVQMK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVAAK
HHCCC
>Mature Secondary Structure
MENPVNTMLTKGWKWFVIVGVIVTLAGFFAISLPVAAGMTITTIIGAIFLVIGLVQLYHT
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSIPKWKAKFWYVISALFYLIGGILILAEPFVGLFTITVMMITIMMFNGVTRMFFGFNSR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHLEGWRWIVFSGLLSTAIAVYFFTLMNNPEFSLSLLGIFMGVSFIFEGISFIFIGVQMK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVAAK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA