Click here to switch to the map view.

The map label for this gene is 167625337

Identifier: 167625337

GI number: 167625337

Start: 4173635

End: 4174078

Strand: Reverse

Name: 167625337

Synonym: Shal_3426

Alternate gene names: NA

Gene position: 4174078-4173635 (Counterclockwise)

Preceding gene: 167625338

Following gene: 167625333

Centisome position: 79.86

GC content: 45.05

Gene sequence:

>444_bases
ATGCGTACTCGACAGATTTTATGCCCAACTGATTTTTCATTGACGGCATCACATGCACAAGGCTATGCGATAGAGATGGC
TAATTTATACGGCGTGAGTTTACGCTTGGTGCATGTTATGAGTGAGCCGTTCAGTGAGCATCATTACGGTATTGCAGTAG
AATCGGCGGAGCAGCTCGATAGACAAATTGAGGTTGCTGCAAATGAAAACCTTGAGAAACATCAATTGCAGATCCAACAG
GAGTTAAACCATGGTTTGACGGTGAAGACTGTGCTGCGTAAGGGTGATGTCTTAGATGAGCTACTTGAAGAGGCCGAGGT
TGGAGAGGTTGGCATGATCGTTATTGCTAGCCATGGTCGAAAGGGAATTTCACATCTATTAAATCCTAATATCGCTGAGG
CGTTAGCGAACAAGGCTAAATGTCCAGTGCTGGTGGTGAAGTAA

Upstream 100 bases:

>100_bases
TATAGAGAGTTATCTGCAAATTGCTCGCTGTTGTCTTAATCCAGTGAACGCTTTGCGGTAAAAGCAATCAAGCCACTTAA
GGCTAGATTGAGGAGAGGTT

Downstream 100 bases:

>100_bases
AGTGGGTTACTTATGGCTGTTATCTAGGGTTTAGTTAACAATGAGACAGAAAACAGCAGTCACACTTTAATTTTTAGCCC
TAAACCACTTACTTCAGAAG

Product: UspA domain-containing protein

Products: NA

Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family; Uspa Domain-Containing Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRTRQILCPTDFSLTASHAQGYAIEMANLYGVSLRLVHVMSEPFSEHHYGIAVESAEQLDRQIEVAANENLEKHQLQIQQ
ELNHGLTVKTVLRKGDVLDELLEEAEVGEVGMIVIASHGRKGISHLLNPNIAEALANKAKCPVLVVK

Sequences:

>Translated_147_residues
MRTRQILCPTDFSLTASHAQGYAIEMANLYGVSLRLVHVMSEPFSEHHYGIAVESAEQLDRQIEVAANENLEKHQLQIQQ
ELNHGLTVKTVLRKGDVLDELLEEAEVGEVGMIVIASHGRKGISHLLNPNIAEALANKAKCPVLVVK
>Mature_147_residues
MRTRQILCPTDFSLTASHAQGYAIEMANLYGVSLRLVHVMSEPFSEHHYGIAVESAEQLDRQIEVAANENLEKHQLQIQQ
ELNHGLTVKTVLRKGDVLDELLEEAEVGEVGMIVIASHGRKGISHLLNPNIAEALANKAKCPVLVVK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16228; Mature: 16228

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRQILCPTDFSLTASHAQGYAIEMANLYGVSLRLVHVMSEPFSEHHYGIAVESAEQLD
CCCCEEECCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHH
RQIEVAANENLEKHQLQIQQELNHGLTVKTVLRKGDVLDELLEEAEVGEVGMIVIASHGR
HHEEHHCCCCHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCC
KGISHLLNPNIAEALANKAKCPVLVVK
HHHHHHCCCCHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MRTRQILCPTDFSLTASHAQGYAIEMANLYGVSLRLVHVMSEPFSEHHYGIAVESAEQLD
CCCCEEECCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHH
RQIEVAANENLEKHQLQIQQELNHGLTVKTVLRKGDVLDELLEEAEVGEVGMIVIASHGR
HHEEHHCCCCHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCC
KGISHLLNPNIAEALANKAKCPVLVVK
HHHHHHCCCCHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA