| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is leuE [H]
Identifier: 167625304
GI number: 167625304
Start: 4137827
End: 4138441
Strand: Reverse
Name: leuE [H]
Synonym: Shal_3393
Alternate gene names: 167625304
Gene position: 4138441-4137827 (Counterclockwise)
Preceding gene: 167625307
Following gene: 167625300
Centisome position: 79.18
GC content: 49.92
Gene sequence:
>615_bases ATGAGTATTAGCACTTGGCTAGGCTTGTTAGCAATTTGCTGTTTAGGCGCCATGTCACCGGGGCCAAGTTTGGCTATGGT GGTGAGACACACCTTAGGTGGTGGTCGGGGAAAAGGGATTATCTGCGCTTGGGCGCACTCTATCGGTATTGGTATTTATG CCCTAGTTACATTATTGGGGTTGGCGGTGCTGCTAAAGCAGGCGCCAATGGTATTTAATGGTATTGCGATTATCGGTGCG CTTTATCTTGCCTATATGGGCATACAGGCGTTGCGATCCAAGGGGGGAATGTCAGATAAACTCGCAGCAGGCAAGCCTAC GGATGCGTTTAGTGCGGCGAGAGATGGTCTGGCTATCTCCTTATTCAACCCTAAAATTATGCTGTTTTTCTTGGCGCTAT TTAGCCAGTTTGTAATGGTTGCCGACAGCTTGACTGGTAAGGCCTTGATTGTGTTGACGCCACTGGTGGTTGACGGGCTT TGGTATACGCTTATCGCCTTGGTATTGTCTCACGCCTCTGTGCTGCCTAAGCTAAGGGCAAAAGCGGCCCTTATCGATAA GTTATCCGGTGTGGTACTGATCCTACTTGCGGTGCGGGTGGTTGTTACCCTCTAG
Upstream 100 bases:
>100_bases CTCAATTATGCCCCCATAACGCAGATCGTGTATATTGTGGCGATTAAAGCGCTGAGTTAATTACGAAGTGTCATTATAAA AACAATAATAGAGGAAAAAG
Downstream 100 bases:
>100_bases CCTCCAGAGTTTGAATATCAACATTTACCCATAAAAAAACGCCATCTAAACAGATGGCGTTCTTATATCCATTAGCAGGC AAGCTTCAATCAGAGAGCTT
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSISTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGIYALVTLLGLAVLLKQAPMVFNGIAIIGA LYLAYMGIQALRSKGGMSDKLAAGKPTDAFSAARDGLAISLFNPKIMLFFLALFSQFVMVADSLTGKALIVLTPLVVDGL WYTLIALVLSHASVLPKLRAKAALIDKLSGVVLILLAVRVVVTL
Sequences:
>Translated_204_residues MSISTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGIYALVTLLGLAVLLKQAPMVFNGIAIIGA LYLAYMGIQALRSKGGMSDKLAAGKPTDAFSAARDGLAISLFNPKIMLFFLALFSQFVMVADSLTGKALIVLTPLVVDGL WYTLIALVLSHASVLPKLRAKAALIDKLSGVVLILLAVRVVVTL >Mature_203_residues SISTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGIYALVTLLGLAVLLKQAPMVFNGIAIIGAL YLAYMGIQALRSKGGMSDKLAAGKPTDAFSAARDGLAISLFNPKIMLFFLALFSQFVMVADSLTGKALIVLTPLVVDGLW YTLIALVLSHASVLPKLRAKAALIDKLSGVVLILLAVRVVVTL
Specific function: Exporter of leucine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=185, Percent_Identity=28.1081081081081, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786522, Length=179, Percent_Identity=26.8156424581006, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI48994978, Length=200, Percent_Identity=27, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21272; Mature: 21141
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGIYALVTLLG CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHH LAVLLKQAPMVFNGIAIIGALYLAYMGIQALRSKGGMSDKLAAGKPTDAFSAARDGLAIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEE LFNPKIMLFFLALFSQFVMVADSLTGKALIVLTPLVVDGLWYTLIALVLSHASVLPKLRA EECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAALIDKLSGVVLILLAVRVVVTL HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SISTWLGLLAICCLGAMSPGPSLAMVVRHTLGGGRGKGIICAWAHSIGIGIYALVTLLG CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHH LAVLLKQAPMVFNGIAIIGALYLAYMGIQALRSKGGMSDKLAAGKPTDAFSAARDGLAIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEE LFNPKIMLFFLALFSQFVMVADSLTGKALIVLTPLVVDGLWYTLIALVLSHASVLPKLRA EECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAALIDKLSGVVLILLAVRVVVTL HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA