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The map label for this gene is yaeB [C]

Identifier: 167625251

GI number: 167625251

Start: 4080023

End: 4080520

Strand: Reverse

Name: yaeB [C]

Synonym: Shal_3340

Alternate gene names: 167625251

Gene position: 4080520-4080023 (Counterclockwise)

Preceding gene: 167625252

Following gene: 167625250

Centisome position: 78.07

GC content: 42.57

Gene sequence:

>498_bases
ATGCTTTTTAATGACGAGACCACTATGATTCAATTTAATGCCATAGGGTATGCAAAAACCGCGTATAAAACGATTGCTGA
TATGCCGATCCAAGGGGCGGGTATTGCCGATAATTTAGCGCAAATTGTAATAGATGAAGCTCTGCAGGCTGGCTTACAAG
ATCTCGGTGCCTTCTCTCATATTTATGTGATTTTTCATCTGCATAAAATGAGTGAACCAGCGCTGAGCGTAATCCCTTTT
CTTGATACAAAACCACATGGTATTTTTGCGACTCGCTCGCCAAAAAGACCCAATCCGATCGGACTCTCCATCGCTGAAAT
CGAGCGAATTGAAGGCAACATTATTTTCGTAAAAGATATCGACCTGCTTGATGGCACGCCAATCTTAGACATTAAGCCCT
ATATTCAAGCTTTCGATAATATCAGCAATACTCGCGATGGCTGGTATGAACAAGGACTGGACCCTAAAACGATCCGCTCA
GATGAGCGTTTCAAGTAA

Upstream 100 bases:

>100_bases
CCAGATCTGCGTGTAACGAGGTGAGCTGCATACTCTTGTCATTGTATTTCTGTGCGGCCTATTACGCTACTGGGCGATAA
ATTGGCGTATGGTGCTGGTC

Downstream 100 bases:

>100_bases
AGGAAGCTTAGTATTGAACACCATGTTTGGCAGAGAATGGAGGCGCTTATTTTTACTTGGCTTGAGCTTTTGCATATTGA
TTTAAGAAATAAATCAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLFNDETTMIQFNAIGYAKTAYKTIADMPIQGAGIADNLAQIVIDEALQAGLQDLGAFSHIYVIFHLHKMSEPALSVIPF
LDTKPHGIFATRSPKRPNPIGLSIAEIERIEGNIIFVKDIDLLDGTPILDIKPYIQAFDNISNTRDGWYEQGLDPKTIRS
DERFK

Sequences:

>Translated_165_residues
MLFNDETTMIQFNAIGYAKTAYKTIADMPIQGAGIADNLAQIVIDEALQAGLQDLGAFSHIYVIFHLHKMSEPALSVIPF
LDTKPHGIFATRSPKRPNPIGLSIAEIERIEGNIIFVKDIDLLDGTPILDIKPYIQAFDNISNTRDGWYEQGLDPKTIRS
DERFK
>Mature_165_residues
MLFNDETTMIQFNAIGYAKTAYKTIADMPIQGAGIADNLAQIVIDEALQAGLQDLGAFSHIYVIFHLHKMSEPALSVIPF
LDTKPHGIFATRSPKRPNPIGLSIAEIERIEGNIIFVKDIDLLDGTPILDIKPYIQAFDNISNTRDGWYEQGLDPKTIRS
DERFK

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=145, Percent_Identity=35.1724137931034, Blast_Score=97, Evalue=8e-21,
Organism=Escherichia coli, GI1786393, Length=138, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45552503, Length=157, Percent_Identity=38.2165605095541, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24586408, Length=136, Percent_Identity=39.7058823529412, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 18432; Mature: 18432

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFNDETTMIQFNAIGYAKTAYKTIADMPIQGAGIADNLAQIVIDEALQAGLQDLGAFSH
CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
IYVIFHLHKMSEPALSVIPFLDTKPHGIFATRSPKRPNPIGLSIAEIERIEGNIIFVKDI
HHHEEEHHHCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEC
DLLDGTPILDIKPYIQAFDNISNTRDGWYEQGLDPKTIRSDERFK
CCCCCCCEEECCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLFNDETTMIQFNAIGYAKTAYKTIADMPIQGAGIADNLAQIVIDEALQAGLQDLGAFSH
CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
IYVIFHLHKMSEPALSVIPFLDTKPHGIFATRSPKRPNPIGLSIAEIERIEGNIIFVKDI
HHHEEEHHHCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEC
DLLDGTPILDIKPYIQAFDNISNTRDGWYEQGLDPKTIRSDERFK
CCCCCCCEEECCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]