Click here to switch to the map view.

The map label for this gene is 167625246

Identifier: 167625246

GI number: 167625246

Start: 4074103

End: 4076070

Strand: Reverse

Name: 167625246

Synonym: Shal_3335

Alternate gene names: NA

Gene position: 4076070-4074103 (Counterclockwise)

Preceding gene: 167625250

Following gene: 167625245

Centisome position: 77.98

GC content: 45.88

Gene sequence:

>1968_bases
ATGATGAGTTTAAATAAACGCTATTTAGTATTGGCTGTTGCAGCTGCAATGGGTTTAAGTGCATGTGGTGATGATGGTAA
AGATGGCAGCGATGGTGAGTATATCCCTCCCACTGTAGGTACATCTGTAGAAACTAAAATTGAGTTAATAGATCATACTA
TTGAAGATGGTCAAATTAGCTTCGAGTTTCAGGCTATTAACGAAGAGGGCGTCATAATTGATGGCTTGCAAAAGGCAGAA
GCTAAGTTCGCCATACAAACTGAAAAAGGTATTGGATTAAGTCGTACAGGGGAAGGCACTCTTGGCGGTTATGGCACTTT
TGATGCGACAAAAGATAGCAATCCAGAAGGCGCCTCATTAGCGATTAATGAAGCGGGTAATTATAGCTTTGTTATGCCGA
TGGAACATGTGAAGGCGGGTGACGTCGGGATTGTCTGGTTACGCGTCGGGGGAGCTAAAGTTGATGACACGGTGTCAATT
GCACGCAGTATGGCATTAATCGTCGACAAACCTGATGCGTTGCATACCACAACCACTGGAACCTGCTATACCTGCCATGT
GGACTACGCCACCTCTGATTTCCCTCACCCTAGCTATACGGCTATCGATTTAGAAGGTAAGGTCGACTTCGTTGCAGGTT
GTATGGTCTGTCATGGCAATATCTCAAGAAATGAGGAAAATGGCGGCTATGCGAAAAACACTCTGCAAAAAATAGGTCAC
ATTAATCATCAATCATTCGAACGTGATTTCCAAGTGACTAACTGCTATACCTGCCACGCTGAACCAGTAATGAATACTAG
TATTGCAGGCAATGGTTGCGTCGATTGTCACGCATCGGGCGCCACTGTGAACGATAAGATTGCCGCTTTTGCCGATGATG
TCGATGTACGCGCTATCCACGCGACTAAATCAGGGATTTTAGAGCGTCAACAGACCCGTGATTCACATACTACAACTCTA
TCGGCTCCATACTGGGACAAGGATGTGGCATGGACAGATAAGCCGAGTGGGGCAGTGTGTACCGATCTGAAGTTGTTTAA
AATCGAAGGTGAGACACAGACTCAGCTTAATATTGCCAATTTATATGGCGAGACCTTAAGTTATGCTGGTGGCTATATTC
ATGGCTATGACAGTAAGCACAATACTATCGTGGGTAGAGCCAATGCCTATGGTGCTCATCAATATGTTGAGCGTGAAGAT
GGTACGCGTTCAGTCTGTTACCCTGATCTTGTAGAGGGTTTTGCAAACTCAAATCTAGCGGCGAGTTCCCGATTGACCTT
TGCCTTGGGCGATGTTGAAAATGCGGGCTATACCGGCGTGACATTAACGTCATACTCTGATGTAGTTTCGACCGACATTT
ATGATCCTGCGGTCACAGTGCCAACATTTACGCCTGAAGGTAAGTATGAGCGTCGCCTTGCTGTCACCAATGATAGCTGT
ACTAGCTGTCATAACAGTGAGAGTAACTATCATAAGAATGGTAGCTATCAAGAAGGTGGCATAGATTGTGTTGCATGTCA
TAACAATGGCCAAGACCGCAAGTCAAAAATGTCAGCACCTGGATTTGGTCCAATGGTTCACAGCATGCATTGGGGTAAAG
GCAACGCGGTAAATGATGCAGAAGGCGTTGCTAACTCAGCGGATAAGCTCAATGCTGAAAACTGCGTCGCATGTCACGCC
GATGGCATCGATCTCTATGCGGTACCAAATCAGTATATTCGTTCTCAAGCTTATCACGCTGGCGATACCACCAAGATGTC
TAGCCCGGTATTAGCTAACTGTTATGCTTGTCATGATAGCGAACAAGCCCTAAACCACATGATTCAAAACGGTGGTGAGC
TAAGTGCCGAGAAAGGTGCTGGTGATGATGGCGAGTGGTACACACTGCCAACATCGGAGTCTTGTGCGACCTGTCACGCC
ACTGGTAAAACATTTGGCATCGAGAAATACCACGTGTTTGAGCGTTAG

Upstream 100 bases:

>100_bases
TAGTTGAGTATTTAATTAACGTTACCAAGTTCACAATTTTCCTTGTAATAAAAAAATACTGTTAAGTCGCAATAACAATA
ACAATATGATTAGGATGATT

Downstream 100 bases:

>100_bases
ATTGACTCGTGTCAGGAAGCTGCTAAGTCAGGTAGGTGTTTGATTATCCCAACCTTTATGTTGGCATCCCTGCAGGCTGT
CCAAAGGTGGGGCTTGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Decaheme Cytochrome C

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MMSLNKRYLVLAVAAAMGLSACGDDGKDGSDGEYIPPTVGTSVETKIELIDHTIEDGQISFEFQAINEEGVIIDGLQKAE
AKFAIQTEKGIGLSRTGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDVGIVWLRVGGAKVDDTVSI
ARSMALIVDKPDALHTTTTGTCYTCHVDYATSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
INHQSFERDFQVTNCYTCHAEPVMNTSIAGNGCVDCHASGATVNDKIAAFADDVDVRAIHATKSGILERQQTRDSHTTTL
SAPYWDKDVAWTDKPSGAVCTDLKLFKIEGETQTQLNIANLYGETLSYAGGYIHGYDSKHNTIVGRANAYGAHQYVERED
GTRSVCYPDLVEGFANSNLAASSRLTFALGDVENAGYTGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYERRLAVTNDSC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGKGNAVNDAEGVANSADKLNAENCVACHA
DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSEQALNHMIQNGGELSAEKGAGDDGEWYTLPTSESCATCHA
TGKTFGIEKYHVFER

Sequences:

>Translated_655_residues
MMSLNKRYLVLAVAAAMGLSACGDDGKDGSDGEYIPPTVGTSVETKIELIDHTIEDGQISFEFQAINEEGVIIDGLQKAE
AKFAIQTEKGIGLSRTGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDVGIVWLRVGGAKVDDTVSI
ARSMALIVDKPDALHTTTTGTCYTCHVDYATSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
INHQSFERDFQVTNCYTCHAEPVMNTSIAGNGCVDCHASGATVNDKIAAFADDVDVRAIHATKSGILERQQTRDSHTTTL
SAPYWDKDVAWTDKPSGAVCTDLKLFKIEGETQTQLNIANLYGETLSYAGGYIHGYDSKHNTIVGRANAYGAHQYVERED
GTRSVCYPDLVEGFANSNLAASSRLTFALGDVENAGYTGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYERRLAVTNDSC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGKGNAVNDAEGVANSADKLNAENCVACHA
DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSEQALNHMIQNGGELSAEKGAGDDGEWYTLPTSESCATCHA
TGKTFGIEKYHVFER
>Mature_655_residues
MMSLNKRYLVLAVAAAMGLSACGDDGKDGSDGEYIPPTVGTSVETKIELIDHTIEDGQISFEFQAINEEGVIIDGLQKAE
AKFAIQTEKGIGLSRTGEGTLGGYGTFDATKDSNPEGASLAINEAGNYSFVMPMEHVKAGDVGIVWLRVGGAKVDDTVSI
ARSMALIVDKPDALHTTTTGTCYTCHVDYATSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
INHQSFERDFQVTNCYTCHAEPVMNTSIAGNGCVDCHASGATVNDKIAAFADDVDVRAIHATKSGILERQQTRDSHTTTL
SAPYWDKDVAWTDKPSGAVCTDLKLFKIEGETQTQLNIANLYGETLSYAGGYIHGYDSKHNTIVGRANAYGAHQYVERED
GTRSVCYPDLVEGFANSNLAASSRLTFALGDVENAGYTGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYERRLAVTNDSC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGKGNAVNDAEGVANSADKLNAENCVACHA
DGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDSEQALNHMIQNGGELSAEKGAGDDGEWYTLPTSESCATCHA
TGKTFGIEKYHVFER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70290; Mature: 70290

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLNKRYLVLAVAAAMGLSACGDDGKDGSDGEYIPPTVGTSVETKIELIDHTIEDGQIS
CCCCCCCEEEEHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEE
FEFQAINEEGVIIDGLQKAEAKFAIQTEKGIGLSRTGEGTLGGYGTFDATKDSNPEGASL
EEEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AINEAGNYSFVMPMEHVKAGDVGIVWLRVGGAKVDDTVSIARSMALIVDKPDALHTTTTG
EEECCCCEEEEEEHHHCCCCCEEEEEEEECCCCCCHHHHHHHHEEEEEECCCCCEEECCC
TCYTCHVDYATSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
EEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHC
INHQSFERDFQVTNCYTCHAEPVMNTSIAGNGCVDCHASGATVNDKIAAFADDVDVRAIH
CCCHHHHCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEE
ATKSGILERQQTRDSHTTTLSAPYWDKDVAWTDKPSGAVCTDLKLFKIEGETQTQLNIAN
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEECEEEEEECCCCCCEEEEHH
LYGETLSYAGGYIHGYDSKHNTIVGRANAYGAHQYVEREDGTRSVCYPDLVEGFANSNLA
HHHHHHHHCCCEEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCC
ASSRLTFALGDVENAGYTGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYERRLAVTNDSC
CCCEEEEEECCCCCCCCCEEEEECCCHHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGKGNAVNDA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCHHHEEECCCCCCCCCH
EGVANSADKLNAENCVACHADGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDS
HHCCCCHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH
EQALNHMIQNGGELSAEKGAGDDGEWYTLPTSESCATCHATGKTFGIEKYHVFER
HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEECCC
>Mature Secondary Structure
MMSLNKRYLVLAVAAAMGLSACGDDGKDGSDGEYIPPTVGTSVETKIELIDHTIEDGQIS
CCCCCCCEEEEHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEE
FEFQAINEEGVIIDGLQKAEAKFAIQTEKGIGLSRTGEGTLGGYGTFDATKDSNPEGASL
EEEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AINEAGNYSFVMPMEHVKAGDVGIVWLRVGGAKVDDTVSIARSMALIVDKPDALHTTTTG
EEECCCCEEEEEEHHHCCCCCEEEEEEEECCCCCCHHHHHHHHEEEEEECCCCCEEECCC
TCYTCHVDYATSDFPHPSYTAIDLEGKVDFVAGCMVCHGNISRNEENGGYAKNTLQKIGH
EEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHC
INHQSFERDFQVTNCYTCHAEPVMNTSIAGNGCVDCHASGATVNDKIAAFADDVDVRAIH
CCCHHHHCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEE
ATKSGILERQQTRDSHTTTLSAPYWDKDVAWTDKPSGAVCTDLKLFKIEGETQTQLNIAN
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEECEEEEEECCCCCCEEEEHH
LYGETLSYAGGYIHGYDSKHNTIVGRANAYGAHQYVEREDGTRSVCYPDLVEGFANSNLA
HHHHHHHHCCCEEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCC
ASSRLTFALGDVENAGYTGVTLTSYSDVVSTDIYDPAVTVPTFTPEGKYERRLAVTNDSC
CCCEEEEEECCCCCCCCCEEEEECCCHHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCC
TSCHNSESNYHKNGSYQEGGIDCVACHNNGQDRKSKMSAPGFGPMVHSMHWGKGNAVNDA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCHHHEEECCCCCCCCCH
EGVANSADKLNAENCVACHADGIDLYAVPNQYIRSQAYHAGDTTKMSSPVLANCYACHDS
HHCCCCHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH
EQALNHMIQNGGELSAEKGAGDDGEWYTLPTSESCATCHATGKTFGIEKYHVFER
HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA