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The map label for this gene is 167625245

Identifier: 167625245

GI number: 167625245

Start: 4071981

End: 4073564

Strand: Reverse

Name: 167625245

Synonym: Shal_3334

Alternate gene names: NA

Gene position: 4073564-4071981 (Counterclockwise)

Preceding gene: 167625246

Following gene: 167625244

Centisome position: 77.93

GC content: 50.44

Gene sequence:

>1584_bases
ATGAGTTTAGTTCAATATTCCGATTCCCTGCTGTCGGTGGTACCGCCACTGTTAGCCGTTATCCTCGCCATTACGACTCG
TCGTGTACTGTTATCCTTAGGGATCGGTATTCTTGCTGGTGCCATACTGCTAAGTAACTACAATCCGCTGAGTGCATTGC
AGTACCTGTTCAATATCGTCTCAGGTATCTTTTGGAGTGATGGCGCTATCAATAGCGGTAACGTCAATATGCTGTTGTTT
ATGTTGCTGCTCGGTGGTTTGATCAGCCTGATGACAGCTACGGGGGCGACGAAGGCTTTTGCTGAGTGGGGAGTACGCCG
TTGTAAAGACCGCCGCAGTGCCAATATGTTAACTGGCTTAATGGTCTTTGCCTTCTTCATCGATGACTTTTTCCACAGTT
TGTCTGTGGGCCCCATCTGCCGTCCAGTAACAGATAGGTTCCAGATCTCACGGGCAAAGCTGGCTTATCTGCTGGACTCA
ACCGCCGCCCCTGTGTGCGTCATCATGCCAATTTCCTCTTGGGGGGCGTTTATCATTGCCATCCTCGGCGGTATTTTGGT
GACCAATGGTATTACCGATATCAGCCCGATTGCCATGTTTGTGCAGATGATCCCGATGAACCTTTACGCGGTGTTTACCC
TGTTAATGGTATTAGTGGTTATCGCCTTTCAGCTCGATATTGGTCCTATGCGTCAACATGAGCGCTGGGCACAAGAAGGC
AAGCTGTGGGATGAGTCTAAGGGACGTCCTAAAGGGCTTGAGATCACCACCGAGGGACAAGGCAAAGGCGGTATGATTGA
TATGGTCTTGCCTATCGCAACCTTAACGCTGTCGAGCATCTTCTTCATGGTATGGAGCGGCGCCGAAGCCCTTTCGGCTA
AGGGGCAGGCATTTAGCTTGATCGGTTCTCTTGAGCATACCGATGTGGGGTCGTCCTTGGTGTACGCTGCACTATGTAGT
CTTGCCGTCTCTATTGTGTTAGCACTGCGATTAAAGTTGCCTGCCAAAACATGGTTATCTGCAGCGCCACAAGGTGTGCA
GGCGATGATGCCAGCGATTATTATCCTGCTGTTTGCTTGGACGATTGGCACAGTAGTGAGCGATATGCAGACTGGACAAT
ACCTCGCTGCATTGACTAAGAGCAGTATTCCGGTTCAGCTTTTACCTGCTTTAGTGTTTGTTCTTGCATGCGGAATGTCA
TTTGCGACCGGCACTAGCTGGGGCACGTTCGGCATCATGTTGCCACTGGCAGGTGATATCGCTATCGCCAGTGATGCAAG
CCTATTGTTGCCTATGCTTGCAGCGGTATTAGCTGGATCTGTATTTGGCGACCATAGCTCACCTATCTCGAGTACTAGTA
TCCTATCGGCGACGGGCGCGAGCTGTCACCATATGGATCATGTTATGACCCAGCTGCCCTATGCCATCACGGTTGCCTTT
GGTGCCTTCCTAGGTTATCTCGCAATGGGTATTACTGGCTCAACCCTTGCCGGTATCGCGGTGAGTGCACTTTGGTTCCT
TGCGAACTGTGCATTCCATCTTCGCCGTCATAAAAGACAGCAAATGGCATTAGCTAGCGCATAG

Upstream 100 bases:

>100_bases
ATGGAGCGCTATTAGAGGGGTAAGAAGTATTATTTCGATTGAAATCTGTTTCTCTATCCTTTTGGTAGATCTCCACCTAA
ATAATAGGTGTTACGAGATC

Downstream 100 bases:

>100_bases
TCGTACCATGGCGATATTTCAAAGGCTTAACTTGATAAGTTAATCCGATAAGTTAACTCAAGAAGAGGCCCCTATGGGCC
TTTTCTATTGTCAGGCTAAA

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MSLVQYSDSLLSVVPPLLAVILAITTRRVLLSLGIGILAGAILLSNYNPLSALQYLFNIVSGIFWSDGAINSGNVNMLLF
MLLLGGLISLMTATGATKAFAEWGVRRCKDRRSANMLTGLMVFAFFIDDFFHSLSVGPICRPVTDRFQISRAKLAYLLDS
TAAPVCVIMPISSWGAFIIAILGGILVTNGITDISPIAMFVQMIPMNLYAVFTLLMVLVVIAFQLDIGPMRQHERWAQEG
KLWDESKGRPKGLEITTEGQGKGGMIDMVLPIATLTLSSIFFMVWSGAEALSAKGQAFSLIGSLEHTDVGSSLVYAALCS
LAVSIVLALRLKLPAKTWLSAAPQGVQAMMPAIIILLFAWTIGTVVSDMQTGQYLAALTKSSIPVQLLPALVFVLACGMS
FATGTSWGTFGIMLPLAGDIAIASDASLLLPMLAAVLAGSVFGDHSSPISSTSILSATGASCHHMDHVMTQLPYAITVAF
GAFLGYLAMGITGSTLAGIAVSALWFLANCAFHLRRHKRQQMALASA

Sequences:

>Translated_527_residues
MSLVQYSDSLLSVVPPLLAVILAITTRRVLLSLGIGILAGAILLSNYNPLSALQYLFNIVSGIFWSDGAINSGNVNMLLF
MLLLGGLISLMTATGATKAFAEWGVRRCKDRRSANMLTGLMVFAFFIDDFFHSLSVGPICRPVTDRFQISRAKLAYLLDS
TAAPVCVIMPISSWGAFIIAILGGILVTNGITDISPIAMFVQMIPMNLYAVFTLLMVLVVIAFQLDIGPMRQHERWAQEG
KLWDESKGRPKGLEITTEGQGKGGMIDMVLPIATLTLSSIFFMVWSGAEALSAKGQAFSLIGSLEHTDVGSSLVYAALCS
LAVSIVLALRLKLPAKTWLSAAPQGVQAMMPAIIILLFAWTIGTVVSDMQTGQYLAALTKSSIPVQLLPALVFVLACGMS
FATGTSWGTFGIMLPLAGDIAIASDASLLLPMLAAVLAGSVFGDHSSPISSTSILSATGASCHHMDHVMTQLPYAITVAF
GAFLGYLAMGITGSTLAGIAVSALWFLANCAFHLRRHKRQQMALASA
>Mature_526_residues
SLVQYSDSLLSVVPPLLAVILAITTRRVLLSLGIGILAGAILLSNYNPLSALQYLFNIVSGIFWSDGAINSGNVNMLLFM
LLLGGLISLMTATGATKAFAEWGVRRCKDRRSANMLTGLMVFAFFIDDFFHSLSVGPICRPVTDRFQISRAKLAYLLDST
AAPVCVIMPISSWGAFIIAILGGILVTNGITDISPIAMFVQMIPMNLYAVFTLLMVLVVIAFQLDIGPMRQHERWAQEGK
LWDESKGRPKGLEITTEGQGKGGMIDMVLPIATLTLSSIFFMVWSGAEALSAKGQAFSLIGSLEHTDVGSSLVYAALCSL
AVSIVLALRLKLPAKTWLSAAPQGVQAMMPAIIILLFAWTIGTVVSDMQTGQYLAALTKSSIPVQLLPALVFVLACGMSF
ATGTSWGTFGIMLPLAGDIAIASDASLLLPMLAAVLAGSVFGDHSSPISSTSILSATGASCHHMDHVMTQLPYAITVAFG
AFLGYLAMGITGSTLAGIAVSALWFLANCAFHLRRHKRQQMALASA

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 56007; Mature: 55876

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLVQYSDSLLSVVPPLLAVILAITTRRVLLSLGIGILAGAILLSNYNPLSALQYLFNIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH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HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]