Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625192

Identifier: 167625192

GI number: 167625192

Start: 3998947

End: 3999681

Strand: Reverse

Name: 167625192

Synonym: Shal_3280

Alternate gene names: NA

Gene position: 3999681-3998947 (Counterclockwise)

Preceding gene: 167625193

Following gene: 167625191

Centisome position: 76.52

GC content: 44.49

Gene sequence:

>735_bases
ATGAAGACTCGTAAAACAGGTAATAATTTAGGCTGTAAGCAGCCAATATTTAAAAGTAGGCTTCAAGCCACACTCTTTAT
AACAACTATAGCCGCATTTGCATTATATTGCGCTATGTTGGTCATCAGTCAAAATGTGAAAGCTGAAGACTCAAGAGTAA
AACCGATGTGGGCGACAGCTCCAACGATGAAGGAGATGATAAATTCTAATCGCTCAGCCCTGTTTCATCGTGCTACCGAC
CCGTGGAAAGGTGCTGAAAAACCACAAGTCACCATGGTTTACTTTACCGATTTTAACTGCCCTTACTGCAAGAAACTGGA
GCCCGAGTTAGATAAGCTCATGGCTGAGTATCCACAGCTTAAAATCATAGTGAAAATGGTGCCATTACAAGGCCAAAGCT
CAGTTGAGGCAGTCGATTTTGCACAAAGGGTCTGGTTAAATGAGCCCGCTAAGTTTCTCAAGCTGAAAGATACATTGATG
GCGGCGCCTCGTAGGCTAGATAGGCAAACTCTCGCTAAAGCTGCAGCGATGACAAAGACTAGCCAATGGTTGACTCAGGC
TGAGAAAAGCATATCACCAGCCATTTCAGATAACTTAGAGTTAATGAGGGGCTTAAGGATAGGCGGCACACCGAGTATGG
TGATTGGAGAGCAAATTATTGTGGGCTTGGTGCCATTTGAACGACTAAAACAGCAAGTCGAACTCACATTGGAGGCACGA
GATGAGCACGGATAG

Upstream 100 bases:

>100_bases
TTGGACAATAGCGCACAGTGCAAGCGCTTAACCGTTATAAATAGAGCGCTACTATTAGCAGCGCCACGAGATAATCTAAG
AGAAAACCTAAGTGAAAAGA

Downstream 100 bases:

>100_bases
TCAAAGGCCAGATAAGTCGAATACGAGTGACAGTCGTGCTGATGGTGCAAATCGTGCGGATAGCGTAGGTAAGCCTCTGC
CATTTGGTCGTAGATTAATT

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; DsbA Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Suppressor For Copper-Sensitivity C; Metal Resistance Protein; Secreted Protein Suppressor For Copper-Sensitivity ScsC; DSBA-Like Thioredoxin Domain Protein; Secreted Protein Suppressor For Copper-Sensitivity C; Protein-Disulfide Isomerase; ThiolDisulfide Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing Protein; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; Copper-Sensitivity Suppressor C Protein; Copper Sensitivity Protein ScsC; Thioredoxin Domain Protein; Secreted Copper-Sensitivity Suppressor C; 27 KDa Outer Membrane Protein

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKTRKTGNNLGCKQPIFKSRLQATLFITTIAAFALYCAMLVISQNVKAEDSRVKPMWATAPTMKEMINSNRSALFHRATD
PWKGAEKPQVTMVYFTDFNCPYCKKLEPELDKLMAEYPQLKIIVKMVPLQGQSSVEAVDFAQRVWLNEPAKFLKLKDTLM
AAPRRLDRQTLAKAAAMTKTSQWLTQAEKSISPAISDNLELMRGLRIGGTPSMVIGEQIIVGLVPFERLKQQVELTLEAR
DEHG

Sequences:

>Translated_244_residues
MKTRKTGNNLGCKQPIFKSRLQATLFITTIAAFALYCAMLVISQNVKAEDSRVKPMWATAPTMKEMINSNRSALFHRATD
PWKGAEKPQVTMVYFTDFNCPYCKKLEPELDKLMAEYPQLKIIVKMVPLQGQSSVEAVDFAQRVWLNEPAKFLKLKDTLM
AAPRRLDRQTLAKAAAMTKTSQWLTQAEKSISPAISDNLELMRGLRIGGTPSMVIGEQIIVGLVPFERLKQQVELTLEAR
DEHG
>Mature_244_residues
MKTRKTGNNLGCKQPIFKSRLQATLFITTIAAFALYCAMLVISQNVKAEDSRVKPMWATAPTMKEMINSNRSALFHRATD
PWKGAEKPQVTMVYFTDFNCPYCKKLEPELDKLMAEYPQLKIIVKMVPLQGQSSVEAVDFAQRVWLNEPAKFLKLKDTLM
AAPRRLDRQTLAKAAAMTKTSQWLTQAEKSISPAISDNLELMRGLRIGGTPSMVIGEQIIVGLVPFERLKQQVELTLEAR
DEHG

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27491; Mature: 27491

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRKTGNNLGCKQPIFKSRLQATLFITTIAAFALYCAMLVISQNVKAEDSRVKPMWATA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
PTMKEMINSNRSALFHRATDPWKGAEKPQVTMVYFTDFNCPYCKKLEPELDKLMAEYPQL
HHHHHHHCCCHHEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCE
KIIVKMVPLQGQSSVEAVDFAQRVWLNEPAKFLKLKDTLMAAPRRLDRQTLAKAAAMTKT
EEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQWLTQAEKSISPAISDNLELMRGLRIGGTPSMVIGEQIIVGLVPFERLKQQVELTLEAR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEECC
DEHG
CCCC
>Mature Secondary Structure
MKTRKTGNNLGCKQPIFKSRLQATLFITTIAAFALYCAMLVISQNVKAEDSRVKPMWATA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
PTMKEMINSNRSALFHRATDPWKGAEKPQVTMVYFTDFNCPYCKKLEPELDKLMAEYPQL
HHHHHHHCCCHHEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCE
KIIVKMVPLQGQSSVEAVDFAQRVWLNEPAKFLKLKDTLMAAPRRLDRQTLAKAAAMTKT
EEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQWLTQAEKSISPAISDNLELMRGLRIGGTPSMVIGEQIIVGLVPFERLKQQVELTLEAR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEECC
DEHG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA