| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is gstA [H]
Identifier: 167625174
GI number: 167625174
Start: 3977993
End: 3978616
Strand: Reverse
Name: gstA [H]
Synonym: Shal_3262
Alternate gene names: 167625174
Gene position: 3978616-3977993 (Counterclockwise)
Preceding gene: 167625180
Following gene: 167625168
Centisome position: 76.12
GC content: 47.76
Gene sequence:
>624_bases ATGATAAAGTTATATGGGATCCCCCGTAGTCGCTCATTACGAGTATCATGGACCTTAGAAGAACTCGGTTTAGACTGGCA GTATCAATATATTAATTTTGCAAATGGCGATGGACGTGATCCTGCGTTTTTGGCTGTTAATCCTTGCGGTAAAGTCCCTG CTTTAGAAGATGATGGCTTTGCATTAACCGAGTCGTCAGCAATCGTGCTCTATTTGGCTGAGAAATACGGCAAGGGTAAA TTATTGCCTGTTGCTGGTACTCATGAGTCAGGGCTGCACCATAAGTGGATTAGCTTTATTACCTGTGAACTTGAACAGCC GTTATGGAGTATGGGTAAGCATAAGTTTGCCTTGCCGGAGGAGCAACGACTGGTCGAGATGTTACCTGTAGCCAAGTGGG AGTTTGATAAGGCCGCAGCGATAGCGGAGAAGTGGTTACCCGATAGCGAGTTTTTACTCGGTGATGAGCTGAGCATTGCC GATATTTTGCTGGCGCACACACTGCTGTGGGCAACGCGATTTGAGCAAGATATTCCGCCAAAACTGACAGCCTATCGCGA TAGACTCACAACGCGACCTGCCATGGCTAAAGGCTTAGCGAAAGAAGAGGCGGGCGCCGCTTAA
Upstream 100 bases:
>100_bases CGTTTTATTTTGAAACAAAGTGCAGGTTTCTATTATTAGCGCTTCGGAGTAGCTTAGGAGCTTTACTCATTTAGTTGTTA TCAGGTTAAGGAAGCGTACG
Downstream 100 bases:
>100_bases TCAGCCAGAGTTTAACTGAACATAACAAAAGTCGAGCACAAAAAAAGCATCCACTATTTTTAAACAGAATGTTTTAAATA CAATGGATGCTTTTTTAATG
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIKLYGIPRSRSLRVSWTLEELGLDWQYQYINFANGDGRDPAFLAVNPCGKVPALEDDGFALTESSAIVLYLAEKYGKGK LLPVAGTHESGLHHKWISFITCELEQPLWSMGKHKFALPEEQRLVEMLPVAKWEFDKAAAIAEKWLPDSEFLLGDELSIA DILLAHTLLWATRFEQDIPPKLTAYRDRLTTRPAMAKGLAKEEAGAA
Sequences:
>Translated_207_residues MIKLYGIPRSRSLRVSWTLEELGLDWQYQYINFANGDGRDPAFLAVNPCGKVPALEDDGFALTESSAIVLYLAEKYGKGK LLPVAGTHESGLHHKWISFITCELEQPLWSMGKHKFALPEEQRLVEMLPVAKWEFDKAAAIAEKWLPDSEFLLGDELSIA DILLAHTLLWATRFEQDIPPKLTAYRDRLTTRPAMAKGLAKEEAGAA >Mature_207_residues MIKLYGIPRSRSLRVSWTLEELGLDWQYQYINFANGDGRDPAFLAVNPCGKVPALEDDGFALTESSAIVLYLAEKYGKGK LLPVAGTHESGLHHKWISFITCELEQPLWSMGKHKFALPEEQRLVEMLPVAKWEFDKAAAIAEKWLPDSEFLLGDELSIA DILLAHTLLWATRFEQDIPPKLTAYRDRLTTRPAMAKGLAKEEAGAA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=214, Percent_Identity=29.9065420560748, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922528, Length=196, Percent_Identity=30.1020408163265, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI85725204, Length=169, Percent_Identity=29.585798816568, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI17737923, Length=169, Percent_Identity=29.585798816568, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654975, Length=186, Percent_Identity=29.5698924731183, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864598, Length=164, Percent_Identity=30.4878048780488, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI19922526, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23226; Mature: 23226
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLYGIPRSRSLRVSWTLEELGLDWQYQYINFANGDGRDPAFLAVNPCGKVPALEDDGF CEEEECCCCCCEEEEEEEHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCE ALTESSAIVLYLAEKYGKGKLLPVAGTHESGLHHKWISFITCELEQPLWSMGKHKFALPE EEECCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHEEEECCCCHHHCCCCCCCCCH EQRLVEMLPVAKWEFDKAAAIAEKWLPDSEFLLGDELSIADILLAHTLLWATRFEQDIPP HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCC KLTAYRDRLTTRPAMAKGLAKEEAGAA HHHHHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MIKLYGIPRSRSLRVSWTLEELGLDWQYQYINFANGDGRDPAFLAVNPCGKVPALEDDGF CEEEECCCCCCEEEEEEEHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCE ALTESSAIVLYLAEKYGKGKLLPVAGTHESGLHHKWISFITCELEQPLWSMGKHKFALPE EEECCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHEEEECCCCHHHCCCCCCCCCH EQRLVEMLPVAKWEFDKAAAIAEKWLPDSEFLLGDELSIADILLAHTLLWATRFEQDIPP HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCC KLTAYRDRLTTRPAMAKGLAKEEAGAA HHHHHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA