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The map label for this gene is 167625102

Identifier: 167625102

GI number: 167625102

Start: 3894495

End: 3895169

Strand: Reverse

Name: 167625102

Synonym: Shal_3190

Alternate gene names: NA

Gene position: 3895169-3894495 (Counterclockwise)

Preceding gene: 167625104

Following gene: 167625101

Centisome position: 74.52

GC content: 45.63

Gene sequence:

>675_bases
ATGAAACAGGAGGATTTAGGGCTCGTTAGGTCTGATTTTACCGATTTGGTCCCCTCTCAACAGGCATTAGTGACTTCAGT
TGCAAGAGCTAAGCCCGAATCTGAGCTGCCTTACAGCTTAATTAAGGGCTATCTCAATAGCGCGCAACAAAAGGCGCTGA
TAACAGAGTCTGTAACTTATCCGTTCACCCGCCCAGAAGTGTGCGTTTATGGTTCGCAGCATCCTATTCCACGTAGCCAG
GTGTGGTTTGCCGATAAAGGGTGTGACTATGTTTATTCCGGTTTATTTATACATGCCCTGCCATGGCCTAAATATGCGTA
TAAGCTGCGGCAAAAATTAGCCCGAGAGTTCGGGCTTAATAGTAATGGAGTCTTAGTGAACCGTTATGCCGACGGCCACG
AGTCGATGGGCTGGCATAGTGATGATGAGAAGGAGATTGAAGCAGGAAGTGATATTGCTTCTGTCACCTTAGGTGCTAGC
CGAGACTTTTTCCTTCGCCATAAAAAGACCCAGCAAAAAATAAGTCTATGCCTTGATAGTGGGGACTTACTTATTATGCA
TTGGCCTATGCAAGCGGATTGGGAACACTCACTTCCAAAGCGATTAAAGGTGACAGAACCAAGGTTAAACTTGACCTTTA
GGCGCTTGATTGTTGGTTTCCATCAAACACCTTAA

Upstream 100 bases:

>100_bases
CAATAAGTACCAAATAAATTAGGGCGCATATTATCGCAGATTTATGATCTCAGGTATATGATGTGAATTATGATATCTGC
TGCAGGTGAGAGGTTTGACG

Downstream 100 bases:

>100_bases
TGTGTGGTGTTAACGCGTATGAGCTATCAAAATTTGATGTAATCGATATCGATAGTGCTGCTAGTTGATCTTTAAAGGTT
ATCGCAGTAACCTGCCGCAG

Product: 2OG-Fe(II) oxygenase

Products: NA

Alternate protein names: Alkylated DNA Repair Protein; DNA Repair System Specific For Alkylated DNA; DNA-N1-Methyladenine Dioxygenase; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; CRISPR-Associated Family Protein; DNA Repair System Specific For Alkylated DNA Protein; 2OG-Fe(II) Oxygenase Family Protein; DNA Repair System Protein; Alkylated DNA Repair Protein-Like Protein; Alkylated DNA Repair Protein AlkB

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKQEDLGLVRSDFTDLVPSQQALVTSVARAKPESELPYSLIKGYLNSAQQKALITESVTYPFTRPEVCVYGSQHPIPRSQ
VWFADKGCDYVYSGLFIHALPWPKYAYKLRQKLAREFGLNSNGVLVNRYADGHESMGWHSDDEKEIEAGSDIASVTLGAS
RDFFLRHKKTQQKISLCLDSGDLLIMHWPMQADWEHSLPKRLKVTEPRLNLTFRRLIVGFHQTP

Sequences:

>Translated_224_residues
MKQEDLGLVRSDFTDLVPSQQALVTSVARAKPESELPYSLIKGYLNSAQQKALITESVTYPFTRPEVCVYGSQHPIPRSQ
VWFADKGCDYVYSGLFIHALPWPKYAYKLRQKLAREFGLNSNGVLVNRYADGHESMGWHSDDEKEIEAGSDIASVTLGAS
RDFFLRHKKTQQKISLCLDSGDLLIMHWPMQADWEHSLPKRLKVTEPRLNLTFRRLIVGFHQTP
>Mature_224_residues
MKQEDLGLVRSDFTDLVPSQQALVTSVARAKPESELPYSLIKGYLNSAQQKALITESVTYPFTRPEVCVYGSQHPIPRSQ
VWFADKGCDYVYSGLFIHALPWPKYAYKLRQKLAREFGLNSNGVLVNRYADGHESMGWHSDDEKEIEAGSDIASVTLGAS
RDFFLRHKKTQQKISLCLDSGDLLIMHWPMQADWEHSLPKRLKVTEPRLNLTFRRLIVGFHQTP

Specific function: Unknown

COG id: COG3145

COG function: function code L; Alkylated DNA repair protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224451107, Length=160, Percent_Identity=42.5, Blast_Score=133, Evalue=1e-31,
Organism=Homo sapiens, GI48717226, Length=160, Percent_Identity=42.5, Blast_Score=133, Evalue=1e-31,
Organism=Homo sapiens, GI224451103, Length=160, Percent_Identity=42.5, Blast_Score=133, Evalue=1e-31,
Organism=Homo sapiens, GI21040275, Length=148, Percent_Identity=35.1351351351351, Blast_Score=92, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25552; Mature: 25552

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEDLGLVRSDFTDLVPSQQALVTSVARAKPESELPYSLIKGYLNSAQQKALITESVTY
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PFTRPEVCVYGSQHPIPRSQVWFADKGCDYVYSGLFIHALPWPKYAYKLRQKLAREFGLN
CCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHCEEEEECCCHHHHHHHHHHHHHHHCCC
SNGVLVNRYADGHESMGWHSDDEKEIEAGSDIASVTLGASRDFFLRHKKTQQKISLCLDS
CCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHEECC
GDLLIMHWPMQADWEHSLPKRLKVTEPRLNLTFRRLIVGFHQTP
CCEEEEECCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQEDLGLVRSDFTDLVPSQQALVTSVARAKPESELPYSLIKGYLNSAQQKALITESVTY
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PFTRPEVCVYGSQHPIPRSQVWFADKGCDYVYSGLFIHALPWPKYAYKLRQKLAREFGLN
CCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHCEEEEECCCHHHHHHHHHHHHHHHCCC
SNGVLVNRYADGHESMGWHSDDEKEIEAGSDIASVTLGASRDFFLRHKKTQQKISLCLDS
CCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHEECC
GDLLIMHWPMQADWEHSLPKRLKVTEPRLNLTFRRLIVGFHQTP
CCEEEEECCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA