| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is glmM
Identifier: 167625064
GI number: 167625064
Start: 3847936
End: 3849273
Strand: Reverse
Name: glmM
Synonym: Shal_3152
Alternate gene names: 167625064
Gene position: 3849273-3847936 (Counterclockwise)
Preceding gene: 167625065
Following gene: 167625063
Centisome position: 73.64
GC content: 47.68
Gene sequence:
>1338_bases GTGAAGCAAAGACAATTTTTCGGAACTGATGGTATTCGTGGCAAAGTGGGTGCGGGCAAGATGACCCCAGAGCTTGCACT TAAGCTTGGTTGGGCTGCAGGGCGGGTTTTATCTCGCTCTGGCACGCAAAAAGTGATCATAGGTAAAGATACGCGGATCT CTGGTTACCTATTTGAGTCGGCGTTAGAGGCAGGACTATCTGCTGCTGGCTTAGATGTGATGTTGATTGGCCCAATGCCG ACGCCTGCGGTTGCCTATTTGACGCGCACATTCCGCGCCGAGGCCGGGATCGTGATTAGTGCATCACACAATCCTTATTA CGATAATGGTATTAAATTTTTCGCAAATGATGGTAGCAAGTTAGATGATGAAGTCGAGCTTGAAATTGAAGCCGAACTTG ATAAGCCATTAACTTGTGTCGAGTCTCATGAACTGGGTAAAGTGGTTCGAATTGATGATGCCGCGGGTCGCTATATTGAA TACTGTAAAGGCCATTTCCCTGCCGAGCAGACGTTAAGCGGACTTAAGATTGTCGTCGATTGCGCTCATGGTGCGACCTA CCATATCGCGCCGAGTGTGTTTAAAGAACTAGGCGCCGAAGTGATTGCAATTGGTGATAAGCCAAATGGTCTGAATATTA ACGATAAAGTCGGTGCGACATCGATGGGGCAGATCTGTGAGACCGTATTGGCTGAAAATGCCGATTTAGGTATCGCGCTC GATGGTGATGGCGACCGTATCATGATGGTTAACCGTCATGGACGTGTAATCGATGGTGATGAGATCTTATACATCTTAGC CTGTGATGCGCAAAAGCGTGGTGTGCTGCGCGGCGGTGTGGTTGGTACCTTGATGTCAAACCTCGGCCTAGATCTTGCTC TACAAGCGCTCGATATTCCATTTGTTCGCTCTAAAGTGGGTGACCGCTATGTGATGGAGCTGCTAAAAGAACATGACTGG CGCATCGGTGGTGAAAACTCCGGACATATTTTGAACTTAGATCATGGCACAACCGGTGATGGCATCGTTGCGGGTATTTT GGTATTAGCCGCTATGCAACGTCAAAATGCTACTCTAGAAGAGCTAACTGCTGATATTAAGATGTTGCCACAAGTCTTGG TTAATGTGCGTTTTGAAGGGGATAACGATCCACTGGTTTCAGAGATTGTGCTAGCAGCTAAAGCTGAAGTAGAGCAAAAA CTAGGGGCTCGAGGTCGAGTATTATTACGTAAATCGGGTACCGAACCTTTGTTACGAGTCATGGTCGAGGGCGATGAGCA GGAAGCTGTGACAGAATATGCCCACTATATTGCTGACGCCGTTCGCAACTTAGTCTAA
Upstream 100 bases:
>100_bases TTATAACGCTTTAAGCTAACATTAAGTGTTCAGCTAAAGTCAGTGTTTTTACGGTAGGATTGAAGGATTCAAACTACCGA GTGATAAGTCTGGAGTTAAA
Downstream 100 bases:
>100_bases TTACTTAGTCTAATTAATAGAGGTATTTACAAGGCATTATTGGCAAGTGCGGTTAATTTAGCAGCTAAGTAGCTATTAAT CGTACTGCTCGCTTATTGGT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKQRQFFGTDGIRGKVGAGKMTPELALKLGWAAGRVLSRSGTQKVIIGKDTRISGYLFESALEAGLSAAGLDVMLIGPMP TPAVAYLTRTFRAEAGIVISASHNPYYDNGIKFFANDGSKLDDEVELEIEAELDKPLTCVESHELGKVVRIDDAAGRYIE YCKGHFPAEQTLSGLKIVVDCAHGATYHIAPSVFKELGAEVIAIGDKPNGLNINDKVGATSMGQICETVLAENADLGIAL DGDGDRIMMVNRHGRVIDGDEILYILACDAQKRGVLRGGVVGTLMSNLGLDLALQALDIPFVRSKVGDRYVMELLKEHDW RIGGENSGHILNLDHGTTGDGIVAGILVLAAMQRQNATLEELTADIKMLPQVLVNVRFEGDNDPLVSEIVLAAKAEVEQK LGARGRVLLRKSGTEPLLRVMVEGDEQEAVTEYAHYIADAVRNLV
Sequences:
>Translated_445_residues MKQRQFFGTDGIRGKVGAGKMTPELALKLGWAAGRVLSRSGTQKVIIGKDTRISGYLFESALEAGLSAAGLDVMLIGPMP TPAVAYLTRTFRAEAGIVISASHNPYYDNGIKFFANDGSKLDDEVELEIEAELDKPLTCVESHELGKVVRIDDAAGRYIE YCKGHFPAEQTLSGLKIVVDCAHGATYHIAPSVFKELGAEVIAIGDKPNGLNINDKVGATSMGQICETVLAENADLGIAL DGDGDRIMMVNRHGRVIDGDEILYILACDAQKRGVLRGGVVGTLMSNLGLDLALQALDIPFVRSKVGDRYVMELLKEHDW RIGGENSGHILNLDHGTTGDGIVAGILVLAAMQRQNATLEELTADIKMLPQVLVNVRFEGDNDPLVSEIVLAAKAEVEQK LGARGRVLLRKSGTEPLLRVMVEGDEQEAVTEYAHYIADAVRNLV >Mature_445_residues MKQRQFFGTDGIRGKVGAGKMTPELALKLGWAAGRVLSRSGTQKVIIGKDTRISGYLFESALEAGLSAAGLDVMLIGPMP TPAVAYLTRTFRAEAGIVISASHNPYYDNGIKFFANDGSKLDDEVELEIEAELDKPLTCVESHELGKVVRIDDAAGRYIE YCKGHFPAEQTLSGLKIVVDCAHGATYHIAPSVFKELGAEVIAIGDKPNGLNINDKVGATSMGQICETVLAENADLGIAL DGDGDRIMMVNRHGRVIDGDEILYILACDAQKRGVLRGGVVGTLMSNLGLDLALQALDIPFVRSKVGDRYVMELLKEHDW RIGGENSGHILNLDHGTTGDGIVAGILVLAAMQRQNATLEELTADIKMLPQVLVNVRFEGDNDPLVSEIVLAAKAEVEQK LGARGRVLLRKSGTEPLLRVMVEGDEQEAVTEYAHYIADAVRNLV
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=443, Percent_Identity=66.8171557562077, Blast_Score=582, Evalue=1e-167, Organism=Escherichia coli, GI1788361, Length=454, Percent_Identity=27.3127753303965, Blast_Score=115, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_SHEHH (B0TQA7)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001675358.1 - ProteinModelPortal: B0TQA7 - SMR: B0TQA7 - GeneID: 5905773 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_3152 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK10887 - BioCyc: SHAL458817:SHAL_3152-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 47930; Mature: 47930
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 102-102
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRQFFGTDGIRGKVGAGKMTPELALKLGWAAGRVLSRSGTQKVIIGKDTRISGYLFES CCCCCCCCCCCCCCCCCCCCCCHHHHHEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHH ALEAGLSAAGLDVMLIGPMPTPAVAYLTRTFRAEAGIVISASHNPYYDNGIKFFANDGSK HHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCC LDDEVELEIEAELDKPLTCVESHELGKVVRIDDAAGRYIEYCKGHFPAEQTLSGLKIVVD CCCEEEEEEEECCCCCCEECCCCCCCCEEEEECCCCHHHHHHCCCCCHHHHHCCEEEEEE CAHGATYHIAPSVFKELGAEVIAIGDKPNGLNINDKVGATSMGQICETVLAENADLGIAL ECCCCEEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE DGDGDRIMMVNRHGRVIDGDEILYILACDAQKRGVLRGGVVGTLMSNLGLDLALQALDIP CCCCCEEEEEECCCCEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCC FVRSKVGDRYVMELLKEHDWRIGGENSGHILNLDHGTTGDGIVAGILVLAAMQRQNATLE HHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHH ELTADIKMLPQVLVNVRFEGDNDPLVSEIVLAAKAEVEQKLGARGRVLLRKSGTEPLLRV HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEHE MVEGDEQEAVTEYAHYIADAVRNLV EECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQRQFFGTDGIRGKVGAGKMTPELALKLGWAAGRVLSRSGTQKVIIGKDTRISGYLFES CCCCCCCCCCCCCCCCCCCCCCHHHHHEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHH ALEAGLSAAGLDVMLIGPMPTPAVAYLTRTFRAEAGIVISASHNPYYDNGIKFFANDGSK HHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCC LDDEVELEIEAELDKPLTCVESHELGKVVRIDDAAGRYIEYCKGHFPAEQTLSGLKIVVD CCCEEEEEEEECCCCCCEECCCCCCCCEEEEECCCCHHHHHHCCCCCHHHHHCCEEEEEE CAHGATYHIAPSVFKELGAEVIAIGDKPNGLNINDKVGATSMGQICETVLAENADLGIAL ECCCCEEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE DGDGDRIMMVNRHGRVIDGDEILYILACDAQKRGVLRGGVVGTLMSNLGLDLALQALDIP CCCCCEEEEEECCCCEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCC FVRSKVGDRYVMELLKEHDWRIGGENSGHILNLDHGTTGDGIVAGILVLAAMQRQNATLE HHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHH ELTADIKMLPQVLVNVRFEGDNDPLVSEIVLAAKAEVEQKLGARGRVLLRKSGTEPLLRV HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEHE MVEGDEQEAVTEYAHYIADAVRNLV EECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA