| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is rhlE [H]
Identifier: 167625006
GI number: 167625006
Start: 3773021
End: 3774445
Strand: Reverse
Name: rhlE [H]
Synonym: Shal_3093
Alternate gene names: 167625006
Gene position: 3774445-3773021 (Counterclockwise)
Preceding gene: 167625007
Following gene: 167625005
Centisome position: 72.21
GC content: 46.39
Gene sequence:
>1425_bases TTGATTAGTATAATCTCACGCAGTATTTTGCTAGACTCCGCGCTCACTTTTATTCCTTATACTCTTATTAACTCTATTGA GCCGACCATGAACTTTGATGCATTCGATTTACATCCCAAAATATTAGATGCAGTTTCTGCGCGCGGTTATCAGCAATTGA CCCAAGTTCAATCGCAGGTATTACCCGTTGCAATGGAAGGCAAAGACATTATGGCCTGTGCGCAAACCGGAACCGGTAAA ACGGCTGCGTTCGCCCTGCCTCTACTCAATCGATTAATTCAAGAGTACAACCTTTTTACTGAAGGTGATCTGGAACCTGA ACACCAGTCTAAGGTAAAGGTGTTAGTTTTAACCCCAACTCGTGAACTTGCTATTCAGGTGGCTGACAATATCTCGGCTT ACGCCCAGTTTTTGCCATTTAAGACGACCGCAGTTTATGGTGGTTCAAACATGAATCCACAGCGTAAGGCCTTGCAAGCT GGAGTCGATATCCTAGTGGCTACGCCGGGTCGCCTATTTGACCATATTGGCCAATTCGGTTTAGATCTGTCGAATGTGAC TCACTTAGTGGTTGATGAAGCCGATCGCATGTTGGATTTGGGCTTTGTTCGCGATATCGAAAAAGTAAAAAAGCTGGTGG CTGCGACTCACCAAACATTATTTTTTTCAGCCACTTACAGCGAAGCGGTTAAAACACTGGCCGAGAAAATGTTGCTAGCG CCAGAGTGGATTAATGTGGCGACATCGGCCACGGCAAGCCTAATCACTCAAGAAGTTTATTTGGTCGATACTCGCCGTAA AGCGGAACTACTTTCGGAGCTAATTGGCCGAAATAATTGGCAACAAGTATTGGTGTTTGTCAGTACTCGAGAGAGCGCAG AGCATCTGCACGCTGAATTAAAACTCGATGGCGTAAAAAATGCGGTGTTCCATGGTGAGAAGACTCAAGGCGCTAGAAAC CGTGCATTAGATGAGTTTAAATCTGGCAAGCTACGTGTCATGGTGGCGACCGATGTTGCTGCTCGTGGTCTAGATATTGA AGCACTACCTTTAGTGATCAACCTTGAGCTGCCGTTTGCCGCCGAGGACTATGTGCACCGAGTGGGTCGTACAGGTCGTG CAGGTCTTGCTGGCCGCGCGATTTCGTTTGTATCGCCTCAAGACAGAGAGATGCTGCAAGAAATTGAACTGTTAATTGAG CAGACACTACCTTGTATTACGATGCCGGGCTATGAAGAGGGCGCACCTTTACCGGCTCGTTATCGCGACGTTGTGGTTAA GCCAGTTAAAGAGAAAGGCCATAATAAGCGTAAGTATGAAGATAAAAACCGTCCAGTCAAAAATGCAGTCGGAAAAAGTA ATTACCGCAGCGCAGCGTCGGGCAAAAGTAGCTATGGCCGCTCGAAAGACAAAGCTAAGAAATAG
Upstream 100 bases:
>100_bases ATTTTCAAGGCCCGTCCCGGTTGAAGAGTTTGAGCAGGCCTTTCTCTATACGACAAACAAAGTAATAGAAAAGACTACGG CCTGATCTCGGCAATTTGTT
Downstream 100 bases:
>100_bases CGCCGATATCGAATAATACTCATCTAAGAAAGTGAACATATCTATTGCTAGTGTGTTCACTTTTTTTATGGGTTAAAGTT GGTCTTTTTGCAGGAAATGT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MISIISRSILLDSALTFIPYTLINSIEPTMNFDAFDLHPKILDAVSARGYQQLTQVQSQVLPVAMEGKDIMACAQTGTGK TAAFALPLLNRLIQEYNLFTEGDLEPEHQSKVKVLVLTPTRELAIQVADNISAYAQFLPFKTTAVYGGSNMNPQRKALQA GVDILVATPGRLFDHIGQFGLDLSNVTHLVVDEADRMLDLGFVRDIEKVKKLVAATHQTLFFSATYSEAVKTLAEKMLLA PEWINVATSATASLITQEVYLVDTRRKAELLSELIGRNNWQQVLVFVSTRESAEHLHAELKLDGVKNAVFHGEKTQGARN RALDEFKSGKLRVMVATDVAARGLDIEALPLVINLELPFAAEDYVHRVGRTGRAGLAGRAISFVSPQDREMLQEIELLIE QTLPCITMPGYEEGAPLPARYRDVVVKPVKEKGHNKRKYEDKNRPVKNAVGKSNYRSAASGKSSYGRSKDKAKK
Sequences:
>Translated_474_residues MISIISRSILLDSALTFIPYTLINSIEPTMNFDAFDLHPKILDAVSARGYQQLTQVQSQVLPVAMEGKDIMACAQTGTGK TAAFALPLLNRLIQEYNLFTEGDLEPEHQSKVKVLVLTPTRELAIQVADNISAYAQFLPFKTTAVYGGSNMNPQRKALQA GVDILVATPGRLFDHIGQFGLDLSNVTHLVVDEADRMLDLGFVRDIEKVKKLVAATHQTLFFSATYSEAVKTLAEKMLLA PEWINVATSATASLITQEVYLVDTRRKAELLSELIGRNNWQQVLVFVSTRESAEHLHAELKLDGVKNAVFHGEKTQGARN RALDEFKSGKLRVMVATDVAARGLDIEALPLVINLELPFAAEDYVHRVGRTGRAGLAGRAISFVSPQDREMLQEIELLIE QTLPCITMPGYEEGAPLPARYRDVVVKPVKEKGHNKRKYEDKNRPVKNAVGKSNYRSAASGKSSYGRSKDKAKK >Mature_474_residues MISIISRSILLDSALTFIPYTLINSIEPTMNFDAFDLHPKILDAVSARGYQQLTQVQSQVLPVAMEGKDIMACAQTGTGK TAAFALPLLNRLIQEYNLFTEGDLEPEHQSKVKVLVLTPTRELAIQVADNISAYAQFLPFKTTAVYGGSNMNPQRKALQA GVDILVATPGRLFDHIGQFGLDLSNVTHLVVDEADRMLDLGFVRDIEKVKKLVAATHQTLFFSATYSEAVKTLAEKMLLA PEWINVATSATASLITQEVYLVDTRRKAELLSELIGRNNWQQVLVFVSTRESAEHLHAELKLDGVKNAVFHGEKTQGARN RALDEFKSGKLRVMVATDVAARGLDIEALPLVINLELPFAAEDYVHRVGRTGRAGLAGRAISFVSPQDREMLQEIELLIE QTLPCITMPGYEEGAPLPARYRDVVVKPVKEKGHNKRKYEDKNRPVKNAVGKSNYRSAASGKSSYGRSKDKAKK
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=372, Percent_Identity=41.3978494623656, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI222352149, Length=385, Percent_Identity=36.8831168831169, Blast_Score=255, Evalue=8e-68, Organism=Homo sapiens, GI4758138, Length=377, Percent_Identity=36.0742705570292, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI148613856, Length=379, Percent_Identity=36.1477572559367, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI38201710, Length=379, Percent_Identity=36.1477572559367, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI20149629, Length=448, Percent_Identity=31.9196428571429, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI262118318, Length=367, Percent_Identity=37.6021798365123, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI45446747, Length=371, Percent_Identity=36.6576819407008, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI45446743, Length=371, Percent_Identity=36.6576819407008, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI262231852, Length=367, Percent_Identity=37.6021798365123, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI216548263, Length=367, Percent_Identity=37.6021798365123, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI13518015, Length=367, Percent_Identity=37.6021798365123, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI169881239, Length=398, Percent_Identity=37.4371859296482, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI13514809, Length=398, Percent_Identity=37.4371859296482, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI301171467, Length=400, Percent_Identity=36.75, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI301171475, Length=400, Percent_Identity=36.75, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI87196351, Length=400, Percent_Identity=36.75, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI55749865, Length=388, Percent_Identity=33.5051546391753, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI41327773, Length=365, Percent_Identity=35.6164383561644, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI41327771, Length=411, Percent_Identity=32.6034063260341, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI21071032, Length=380, Percent_Identity=34.2105263157895, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI41327776, Length=447, Percent_Identity=30.2013422818792, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI164664518, Length=366, Percent_Identity=32.7868852459016, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=35.15625, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI188035877, Length=377, Percent_Identity=34.7480106100796, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=34.4827586206897, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=34.4827586206897, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI13129006, Length=389, Percent_Identity=34.9614395886889, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=34.8284960422164, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI7661920, Length=392, Percent_Identity=29.8469387755102, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI13514831, Length=392, Percent_Identity=31.8877551020408, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI41327779, Length=417, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI38569503, Length=409, Percent_Identity=30.8068459657702, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI38569505, Length=408, Percent_Identity=30.6372549019608, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=385, Percent_Identity=30.9090909090909, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI83700235, Length=381, Percent_Identity=32.2834645669291, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI21040371, Length=371, Percent_Identity=30.188679245283, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI4758112, Length=371, Percent_Identity=29.9191374663073, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI18375623, Length=371, Percent_Identity=29.9191374663073, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=31.9783197831978, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI8922886, Length=367, Percent_Identity=31.8801089918256, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI6005743, Length=367, Percent_Identity=31.6076294277929, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI17505907, Length=420, Percent_Identity=28.8095238095238, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI9506931, Length=404, Percent_Identity=28.960396039604, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI256223453, Length=372, Percent_Identity=29.0322580645161, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI62241022, Length=349, Percent_Identity=31.5186246418338, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=29.3010752688172, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI62241024, Length=328, Percent_Identity=32.0121951219512, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI154759257, Length=431, Percent_Identity=27.1461716937355, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=28.8629737609329, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI256773275, Length=401, Percent_Identity=30.9226932668329, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI9966805, Length=310, Percent_Identity=33.2258064516129, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=35.2941176470588, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI284005309, Length=454, Percent_Identity=22.6872246696035, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1787016, Length=386, Percent_Identity=51.5544041450777, Blast_Score=400, Evalue=1e-112, Organism=Escherichia coli, GI87082221, Length=383, Percent_Identity=38.1201044386423, Blast_Score=285, Evalue=6e-78, Organism=Escherichia coli, GI1790214, Length=376, Percent_Identity=37.5, Blast_Score=245, Evalue=4e-66, Organism=Escherichia coli, GI1787605, Length=391, Percent_Identity=38.1074168797954, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI1788930, Length=363, Percent_Identity=36.0881542699724, Blast_Score=218, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17510559, Length=403, Percent_Identity=38.4615384615385, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI115533224, Length=364, Percent_Identity=39.5604395604396, Blast_Score=244, Evalue=8e-65, Organism=Caenorhabditis elegans, GI32565321, Length=394, Percent_Identity=34.5177664974619, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17510309, Length=412, Percent_Identity=35.9223300970874, Blast_Score=225, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17510307, Length=412, Percent_Identity=35.9223300970874, Blast_Score=224, Evalue=5e-59, Organism=Caenorhabditis elegans, GI71995718, Length=396, Percent_Identity=35.1010101010101, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI86570094, Length=384, Percent_Identity=36.9791666666667, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI71995514, Length=386, Percent_Identity=36.7875647668394, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17537549, Length=385, Percent_Identity=34.2857142857143, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17507877, Length=390, Percent_Identity=35.8974358974359, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17555296, Length=368, Percent_Identity=35.054347826087, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17507881, Length=401, Percent_Identity=34.4139650872818, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=33.5135135135135, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507879, Length=387, Percent_Identity=35.9173126614987, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17552642, Length=370, Percent_Identity=33.2432432432432, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17507945, Length=376, Percent_Identity=35.9042553191489, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71995724, Length=374, Percent_Identity=32.620320855615, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=32.1525885558583, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17552114, Length=365, Percent_Identity=29.041095890411, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71999646, Length=425, Percent_Identity=30.5882352941176, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI71999644, Length=391, Percent_Identity=31.2020460358056, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=375, Percent_Identity=32.2666666666667, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI115532548, Length=362, Percent_Identity=32.5966850828729, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI115532546, Length=362, Percent_Identity=32.5966850828729, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI193208216, Length=410, Percent_Identity=30.7317073170732, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17505370, Length=386, Percent_Identity=31.0880829015544, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71982858, Length=362, Percent_Identity=30.6629834254144, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=29.8200514138817, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71990816, Length=405, Percent_Identity=32.0987654320988, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17507641, Length=406, Percent_Identity=29.8029556650246, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI32564046, Length=393, Percent_Identity=30.0254452926209, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI25148203, Length=429, Percent_Identity=26.5734265734266, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17556951, Length=361, Percent_Identity=29.6398891966759, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=28.3116883116883, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=28.3116883116883, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI193206561, Length=360, Percent_Identity=25.2777777777778, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=28.3116883116883, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148291, Length=327, Percent_Identity=29.3577981651376, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=25.8241758241758, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71997889, Length=365, Percent_Identity=27.9452054794521, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25148205, Length=365, Percent_Identity=24.6575342465753, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71982862, Length=218, Percent_Identity=29.3577981651376, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=46.0674157303371, Blast_Score=92, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=369, Percent_Identity=39.2953929539295, Blast_Score=246, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=378, Percent_Identity=38.3597883597884, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6321856, Length=388, Percent_Identity=36.5979381443299, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=395, Percent_Identity=36.9620253164557, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=373, Percent_Identity=37.8016085790885, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6325138, Length=390, Percent_Identity=36.6666666666667, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=365, Percent_Identity=34.5205479452055, Blast_Score=227, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6323947, Length=372, Percent_Identity=31.7204301075269, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=386, Percent_Identity=30.3108808290155, Blast_Score=193, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=31.6216216216216, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=376, Percent_Identity=32.7127659574468, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=366, Percent_Identity=31.1475409836066, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=33.0729166666667, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320173, Length=451, Percent_Identity=28.159645232816, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=395, Percent_Identity=30.126582278481, Blast_Score=182, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=29.7297297297297, Blast_Score=173, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=31.6216216216216, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=31.6216216216216, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=381, Percent_Identity=29.9212598425197, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=364, Percent_Identity=29.6703296703297, Blast_Score=166, Evalue=8e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=27.7634961439589, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=25.5924170616114, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319618, Length=415, Percent_Identity=27.710843373494, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=413, Percent_Identity=28.0871670702179, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=24.438202247191, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI24584399, Length=385, Percent_Identity=36.6233766233766, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI21355075, Length=385, Percent_Identity=38.961038961039, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21356161, Length=392, Percent_Identity=36.9897959183673, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI18857967, Length=462, Percent_Identity=32.034632034632, Blast_Score=232, Evalue=3e-61, Organism=Drosophila melanogaster, GI17985987, Length=398, Percent_Identity=38.4422110552764, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644479, Length=392, Percent_Identity=35.4591836734694, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644483, Length=392, Percent_Identity=35.4591836734694, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI281361218, Length=392, Percent_Identity=35.4591836734694, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24644481, Length=392, Percent_Identity=35.4591836734694, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24644487, Length=392, Percent_Identity=35.4591836734694, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI45551833, Length=392, Percent_Identity=35.4591836734694, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24644485, Length=392, Percent_Identity=35.4591836734694, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24584994, Length=408, Percent_Identity=33.8235294117647, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24585582, Length=383, Percent_Identity=34.2036553524804, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=34.1530054644809, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=34.3406593406593, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=35.3260869565217, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17977678, Length=366, Percent_Identity=35.5191256830601, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI17136814, Length=384, Percent_Identity=35.4166666666667, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24583281, Length=365, Percent_Identity=32.0547945205479, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24583279, Length=365, Percent_Identity=32.0547945205479, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24645031, Length=384, Percent_Identity=30.46875, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI28575014, Length=375, Percent_Identity=32.8, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24666101, Length=386, Percent_Identity=33.419689119171, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=30.4, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=30.4, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=30.4, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=30.4, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI281365720, Length=322, Percent_Identity=32.9192546583851, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24581954, Length=371, Percent_Identity=31.8059299191375, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24581952, Length=371, Percent_Identity=31.8059299191375, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24581956, Length=371, Percent_Identity=31.8059299191375, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=31.0055865921788, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=31.0055865921788, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24642822, Length=393, Percent_Identity=30.2798982188295, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI20130173, Length=431, Percent_Identity=28.538283062645, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI17647335, Length=404, Percent_Identity=27.2277227722772, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI21355559, Length=383, Percent_Identity=32.6370757180157, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=27.7915632754342, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI17136666, Length=438, Percent_Identity=26.4840182648402, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI19920478, Length=397, Percent_Identity=29.2191435768262, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24640164, Length=398, Percent_Identity=26.8844221105528, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=28.2208588957055, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI28571338, Length=254, Percent_Identity=34.251968503937, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI18859659, Length=254, Percent_Identity=34.251968503937, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 52388; Mature: 52388
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIISRSILLDSALTFIPYTLINSIEPTMNFDAFDLHPKILDAVSARGYQQLTQVQSQV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHCHHHHHHHHHHHH LPVAMEGKDIMACAQTGTGKTAAFALPLLNRLIQEYNLFTEGDLEPEHQSKVKVLVLTPT CCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC RELAIQVADNISAYAQFLPFKTTAVYGGSNMNPQRKALQAGVDILVATPGRLFDHIGQFG HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHC LDLSNVTHLVVDEADRMLDLGFVRDIEKVKKLVAATHQTLFFSATYSEAVKTLAEKMLLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCC PEWINVATSATASLITQEVYLVDTRRKAELLSELIGRNNWQQVLVFVSTRESAEHLHAEL CHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHE KLDGVKNAVFHGEKTQGARNRALDEFKSGKLRVMVATDVAARGLDIEALPLVINLELPFA EECCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHCCCCCEEEEEEEEEECCCC AEDYVHRVGRTGRAGLAGRAISFVSPQDREMLQEIELLIEQTLPCITMPGYEEGAPLPAR HHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHH YRDVVVKPVKEKGHNKRKYEDKNRPVKNAVGKSNYRSAASGKSSYGRSKDKAKK HHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MISIISRSILLDSALTFIPYTLINSIEPTMNFDAFDLHPKILDAVSARGYQQLTQVQSQV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHCHHHHHHHHHHHH LPVAMEGKDIMACAQTGTGKTAAFALPLLNRLIQEYNLFTEGDLEPEHQSKVKVLVLTPT CCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC RELAIQVADNISAYAQFLPFKTTAVYGGSNMNPQRKALQAGVDILVATPGRLFDHIGQFG HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHC LDLSNVTHLVVDEADRMLDLGFVRDIEKVKKLVAATHQTLFFSATYSEAVKTLAEKMLLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCC PEWINVATSATASLITQEVYLVDTRRKAELLSELIGRNNWQQVLVFVSTRESAEHLHAEL CHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHE KLDGVKNAVFHGEKTQGARNRALDEFKSGKLRVMVATDVAARGLDIEALPLVINLELPFA EECCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHCCCCCEEEEEEEEEECCCC AEDYVHRVGRTGRAGLAGRAISFVSPQDREMLQEIELLIEQTLPCITMPGYEEGAPLPAR HHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHH YRDVVVKPVKEKGHNKRKYEDKNRPVKNAVGKSNYRSAASGKSSYGRSKDKAKK HHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]