| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is acyII [H]
Identifier: 167624929
GI number: 167624929
Start: 3676025
End: 3678337
Strand: Reverse
Name: acyII [H]
Synonym: Shal_3015
Alternate gene names: 167624929
Gene position: 3678337-3676025 (Counterclockwise)
Preceding gene: 167624933
Following gene: 167624926
Centisome position: 70.37
GC content: 49.29
Gene sequence:
>2313_bases ATGCATAAAATAATAAAAATAGCACTCATTGGAACATCATCAATTGTCGTCGCTACTGTTGGTGGCTTGTACCTAGCGTT ATCTTTGAGCTTGCCTGCACTGGATCAAAGCGTGGCAAGTGACAGGGTTAAGCACAAAGTGACTCTTGAGCGAGATAGCT TAGGCACTGCCATTGTTCACGCCAGTGACCGACAAGATGCCGCCTATGGCTTAGGTTATGCTCATGGGCAGGACAGATTC TTTCAGATGGATCTGTTGCGTAGAAACTCCGCCGGAGAGCTGGCTGAGATCTTCGGTGAGAAAGCCGTTAATTTAGATAA ACGTCGCCGTTTTCATCAACTACGTAAACGTGCAGAGCTGATTGTTGCAAAGCTGGATGCTGATCATTTAGCGGTGCTAA CCACTTATGCTCAAGGGGTGAATGATGCACTTGCTGCCCAAACATTCTCTTCGTTCGAGTATATAGTGACTGGCGCCAAG CCTAAGCCTTGGCAGCCGGCCGATAGTTTGCTGGTGATCTACAGCATGTACCTCGACCTGCAGGGCAACACCATTAAGCG CGACTTAGCGCTAACTCAAATTCAAGTCTTGTTTGGCGAGGCGATGCTCGATTTTCTCATTCAACCAAGCCAATATCAGG CGCCCCTCGATGGCAGTCGGTTTGCATTAGAAGCCTTACCTGTTCCTACATTAGCCAAAGACTTACTCGCTCACGCCAAG ACTCGTGATATTGCCGAGCCACTGGATATTGGCAGTAATAACTGGGCGGTGACGGGTGAGTTGACCGAGAACGGTAATGC CATGTTATCCGATGATATGCATCTCTCTTTTGCCGTGCCAATTATCTGGTATCGGGCCCAGCTTAACTATCAAAAAGGCG GGGCAGAGCGTCAAGTTACCGGTGTGTCGCTGCCCGGCACGCCAGCGATTGTCGTGGGCAGTAATGGCAAGGTGGCATGG GGCTTTACTAACGCTTATATTGACACTGCCGATTGGGTGGCAATCGACGAGAAAACTCCAATCTATTTTGAAAATGAAAC CATCACGCTGCCTGACTCCGAGGTCGTTTATGCAATAGAGATGTCGCCCTATGGCCCAGTAAGAGAGGTTGGCGGGCAAA GGTACGCCCTGTCCTGGGTTGCTCACACCGACTATGCGGTGGATATGCAGCTGATTGATCTCGATAGCGTCGCCAGTGTT GAGCAAGGTATTGAGATTGCTGAAACCATGGGGATCCCGGTGCAGAATATGCTTCTGGTAGACAGTTCAGGCAGTGCGGC TTGGAAACCCGCCGGCGCCTATCCAGCGAGAACCAACCCAAGTGATGTTGCGATGGTGACTGAGGATTATCAGAGCGTTA ATTGGTTGCAAGAGCAAGCTGCGCTACCGCAGGTTATTGACCCCAAAAGTAACCGGTTATGGACTGGTAATTCACGTGTG GTGTCGGTTGACGCGCATAAGCAGCTAGGTGATGGTGGCTATGCGCTGGGTGCGCGCAGTACGCAAATAAGAGACCGATT ACTTGAGGCCGAGAGTTTCTCTGTGGAGGATTTTTACAAGCTACAGCTGGATAATGAGGCGCGATTTTTAGTGCCTTGGC AGCAATTGCTACTCAAGCAATTGAGCACCCAGCCAGAGCGTTTCGCTGAAGATATTGAGTATCTGAAATCATGGCAAGCC TGTGCCTGTAGCGATTCTGTGGGGTATAGCCTTGTGCGTTATTTTCGCACTCAAGTTATCGACAGAACTTTTGCACCACT GGAAACTGCGCTAGCTCAGTATGATCTTAGCTTATCGCCAATTAAGCGTTACTTAGAGCCAGGTATGTGGCAATTAATCA ATTCTCAGGCACAGGATTGGTTACCACAGGAGCAGCATGATTGGTCTTCATATTTAACGGATATGTACCTGCAGAGTAAA GAGAGGTTACTCACTCAATATAGTGAGGATAACGATATGGCCGATCTGGCGTGGGGGAAGGTGAATCAGCTTAAAATTCA GCATCCATTTTCTAAGCAAATCCCCGCGCTGAGTGCGCTGCTCGATATGCCTGTTGTTGCAGGCTTTGGTGACAGCTTTA TGCCTGCGGTGCAAGGGGCTTCTTTTGGTGCATCGCAGCGTTTTATTGTGCAGCCGGGCGATGAGAAAAATGCGATTATG ACGATTCCTGGTGGTCAGTCAGGGCATCCGTTATCTGATTTTTACCGCTCTGGTTTTGATGACTATGTGACACAGCAAAG CACGCCGCTACTGCCGGGAGAGATTGTTCATCGATTAGAGATTATCCCCTCTGCAAAGCGGGTTAATGAGTAG
Upstream 100 bases:
>100_bases TGATCGAGATGAGGATAAAACTCAAATGGCTATTTAACATTTATGTAACCGGGTTTATGATGCATTAGGTTAATTTTTTA GCGCAGGGATAGCTAACTCA
Downstream 100 bases:
>100_bases CTATTTGCTTGAGGGTAAACAGTATTATTAAAGATAATGCTCTCCTTTGTTTAAGGAGAGCATTATGGCGAGTTTGTTAC AGAACGTGTTTTACAAATAC
Product: penicillin amidase
Products: NA
Alternate protein names: Cephalosporin acylase II; Penicillin acylase II; Penicillin amidase II; Penicillin acylase II small subunit; Penicillin acylase II large subunit [H]
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MHKIIKIALIGTSSIVVATVGGLYLALSLSLPALDQSVASDRVKHKVTLERDSLGTAIVHASDRQDAAYGLGYAHGQDRF FQMDLLRRNSAGELAEIFGEKAVNLDKRRRFHQLRKRAELIVAKLDADHLAVLTTYAQGVNDALAAQTFSSFEYIVTGAK PKPWQPADSLLVIYSMYLDLQGNTIKRDLALTQIQVLFGEAMLDFLIQPSQYQAPLDGSRFALEALPVPTLAKDLLAHAK TRDIAEPLDIGSNNWAVTGELTENGNAMLSDDMHLSFAVPIIWYRAQLNYQKGGAERQVTGVSLPGTPAIVVGSNGKVAW GFTNAYIDTADWVAIDEKTPIYFENETITLPDSEVVYAIEMSPYGPVREVGGQRYALSWVAHTDYAVDMQLIDLDSVASV EQGIEIAETMGIPVQNMLLVDSSGSAAWKPAGAYPARTNPSDVAMVTEDYQSVNWLQEQAALPQVIDPKSNRLWTGNSRV VSVDAHKQLGDGGYALGARSTQIRDRLLEAESFSVEDFYKLQLDNEARFLVPWQQLLLKQLSTQPERFAEDIEYLKSWQA CACSDSVGYSLVRYFRTQVIDRTFAPLETALAQYDLSLSPIKRYLEPGMWQLINSQAQDWLPQEQHDWSSYLTDMYLQSK ERLLTQYSEDNDMADLAWGKVNQLKIQHPFSKQIPALSALLDMPVVAGFGDSFMPAVQGASFGASQRFIVQPGDEKNAIM TIPGGQSGHPLSDFYRSGFDDYVTQQSTPLLPGEIVHRLEIIPSAKRVNE
Sequences:
>Translated_770_residues MHKIIKIALIGTSSIVVATVGGLYLALSLSLPALDQSVASDRVKHKVTLERDSLGTAIVHASDRQDAAYGLGYAHGQDRF FQMDLLRRNSAGELAEIFGEKAVNLDKRRRFHQLRKRAELIVAKLDADHLAVLTTYAQGVNDALAAQTFSSFEYIVTGAK PKPWQPADSLLVIYSMYLDLQGNTIKRDLALTQIQVLFGEAMLDFLIQPSQYQAPLDGSRFALEALPVPTLAKDLLAHAK TRDIAEPLDIGSNNWAVTGELTENGNAMLSDDMHLSFAVPIIWYRAQLNYQKGGAERQVTGVSLPGTPAIVVGSNGKVAW GFTNAYIDTADWVAIDEKTPIYFENETITLPDSEVVYAIEMSPYGPVREVGGQRYALSWVAHTDYAVDMQLIDLDSVASV EQGIEIAETMGIPVQNMLLVDSSGSAAWKPAGAYPARTNPSDVAMVTEDYQSVNWLQEQAALPQVIDPKSNRLWTGNSRV VSVDAHKQLGDGGYALGARSTQIRDRLLEAESFSVEDFYKLQLDNEARFLVPWQQLLLKQLSTQPERFAEDIEYLKSWQA CACSDSVGYSLVRYFRTQVIDRTFAPLETALAQYDLSLSPIKRYLEPGMWQLINSQAQDWLPQEQHDWSSYLTDMYLQSK ERLLTQYSEDNDMADLAWGKVNQLKIQHPFSKQIPALSALLDMPVVAGFGDSFMPAVQGASFGASQRFIVQPGDEKNAIM TIPGGQSGHPLSDFYRSGFDDYVTQQSTPLLPGEIVHRLEIIPSAKRVNE >Mature_770_residues MHKIIKIALIGTSSIVVATVGGLYLALSLSLPALDQSVASDRVKHKVTLERDSLGTAIVHASDRQDAAYGLGYAHGQDRF FQMDLLRRNSAGELAEIFGEKAVNLDKRRRFHQLRKRAELIVAKLDADHLAVLTTYAQGVNDALAAQTFSSFEYIVTGAK PKPWQPADSLLVIYSMYLDLQGNTIKRDLALTQIQVLFGEAMLDFLIQPSQYQAPLDGSRFALEALPVPTLAKDLLAHAK TRDIAEPLDIGSNNWAVTGELTENGNAMLSDDMHLSFAVPIIWYRAQLNYQKGGAERQVTGVSLPGTPAIVVGSNGKVAW GFTNAYIDTADWVAIDEKTPIYFENETITLPDSEVVYAIEMSPYGPVREVGGQRYALSWVAHTDYAVDMQLIDLDSVASV EQGIEIAETMGIPVQNMLLVDSSGSAAWKPAGAYPARTNPSDVAMVTEDYQSVNWLQEQAALPQVIDPKSNRLWTGNSRV VSVDAHKQLGDGGYALGARSTQIRDRLLEAESFSVEDFYKLQLDNEARFLVPWQQLLLKQLSTQPERFAEDIEYLKSWQA CACSDSVGYSLVRYFRTQVIDRTFAPLETALAQYDLSLSPIKRYLEPGMWQLINSQAQDWLPQEQHDWSSYLTDMYLQSK ERLLTQYSEDNDMADLAWGKVNQLKIQHPFSKQIPALSALLDMPVVAGFGDSFMPAVQGASFGASQRFIVQPGDEKNAIM TIPGGQSGHPLSDFYRSGFDDYVTQQSTPLLPGEIVHRLEIIPSAKRVNE
Specific function: Unknown
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.11 [H]
Molecular weight: Translated: 85342; Mature: 85342
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKIIKIALIGTSSIVVATVGGLYLALSLSLPALDQSVASDRVKHKVTLERDSLGTAIVH CCCEEEEEEECCCCEEEHHHHHHEEEEECCCCHHHHHHHHHHHHEEEEEECCCCCEEEEE ASDRQDAAYGLGYAHGQDRFFQMDLLRRNSAGELAEIFGEKAVNLDKRRRFHQLRKRAEL CCCCCCHHHCCCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHE IVAKLDADHLAVLTTYAQGVNDALAAQTFSSFEYIVTGAKPKPWQPADSLLVIYSMYLDL EEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEEEEHHEEC QGNTIKRDLALTQIQVLFGEAMLDFLIQPSQYQAPLDGSRFALEALPVPTLAKDLLAHAK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH TRDIAEPLDIGSNNWAVTGELTENGNAMLSDDMHLSFAVPIIWYRAQLNYQKGGAERQVT HHCCCCHHCCCCCCEEEEEEEECCCCEEEECCCEEEEEEEEEEEEEEECCCCCCCCCEEE GVSLPGTPAIVVGSNGKVAWGFTNAYIDTADWVAIDEKTPIYFENETITLPDSEVVYAIE EEECCCCCEEEECCCCEEEEEEECCEECCCCEEEECCCCCEEECCCEEECCCCCEEEEEE MSPYGPVREVGGQRYALSWVAHTDYAVDMQLIDLDSVASVEQGIEIAETMGIPVQNMLLV ECCCCCHHHCCCCEEEEEEEEECCEEEEEEEECCHHHHHHHHCCHHHHHCCCCCCEEEEE DSSGSAAWKPAGAYPARTNPSDVAMVTEDYQSVNWLQEQAALPQVIDPKSNRLWTGNSRV ECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEE VSVDAHKQLGDGGYALGARSTQIRDRLLEAESFSVEDFYKLQLDNEARFLVPWQQLLLKQ EEEECHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECHHHHHHHH LSTQPERFAEDIEYLKSWQACACSDSVGYSLVRYFRTQVIDRTFAPLETALAQYDLSLSP HCCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IKRYLEPGMWQLINSQAQDWLPQEQHDWSSYLTDMYLQSKERLLTQYSEDNDMADLAWGK HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC VNQLKIQHPFSKQIPALSALLDMPVVAGFGDSFMPAVQGASFGASQRFIVQPGDEKNAIM CCEEEEECCHHHCCHHHHHHHHCCCEECCCCCHHHHHCCCCCCCCCEEEECCCCCCCEEE TIPGGQSGHPLSDFYRSGFDDYVTQQSTPLLPGEIVHRLEIIPSAKRVNE ECCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MHKIIKIALIGTSSIVVATVGGLYLALSLSLPALDQSVASDRVKHKVTLERDSLGTAIVH CCCEEEEEEECCCCEEEHHHHHHEEEEECCCCHHHHHHHHHHHHEEEEEECCCCCEEEEE ASDRQDAAYGLGYAHGQDRFFQMDLLRRNSAGELAEIFGEKAVNLDKRRRFHQLRKRAEL CCCCCCHHHCCCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHE IVAKLDADHLAVLTTYAQGVNDALAAQTFSSFEYIVTGAKPKPWQPADSLLVIYSMYLDL EEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEEEEHHEEC QGNTIKRDLALTQIQVLFGEAMLDFLIQPSQYQAPLDGSRFALEALPVPTLAKDLLAHAK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH TRDIAEPLDIGSNNWAVTGELTENGNAMLSDDMHLSFAVPIIWYRAQLNYQKGGAERQVT HHCCCCHHCCCCCCEEEEEEEECCCCEEEECCCEEEEEEEEEEEEEEECCCCCCCCCEEE GVSLPGTPAIVVGSNGKVAWGFTNAYIDTADWVAIDEKTPIYFENETITLPDSEVVYAIE EEECCCCCEEEECCCCEEEEEEECCEECCCCEEEECCCCCEEECCCEEECCCCCEEEEEE MSPYGPVREVGGQRYALSWVAHTDYAVDMQLIDLDSVASVEQGIEIAETMGIPVQNMLLV ECCCCCHHHCCCCEEEEEEEEECCEEEEEEEECCHHHHHHHHCCHHHHHCCCCCCEEEEE DSSGSAAWKPAGAYPARTNPSDVAMVTEDYQSVNWLQEQAALPQVIDPKSNRLWTGNSRV ECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEE VSVDAHKQLGDGGYALGARSTQIRDRLLEAESFSVEDFYKLQLDNEARFLVPWQQLLLKQ EEEECHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECHHHHHHHH LSTQPERFAEDIEYLKSWQACACSDSVGYSLVRYFRTQVIDRTFAPLETALAQYDLSLSP HCCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IKRYLEPGMWQLINSQAQDWLPQEQHDWSSYLTDMYLQSKERLLTQYSEDNDMADLAWGK HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC VNQLKIQHPFSKQIPALSALLDMPVVAGFGDSFMPAVQGASFGASQRFIVQPGDEKNAIM CCEEEEECCHHHCCHHHHHHHHCCCEECCCCCHHHHHCCCCCCCCCEEEECCCCCCCEEE TIPGGQSGHPLSDFYRSGFDDYVTQQSTPLLPGEIVHRLEIIPSAKRVNE ECCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3680178 [H]