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The map label for this gene is lemA [H]

Identifier: 167624852

GI number: 167624852

Start: 3570035

End: 3570601

Strand: Reverse

Name: lemA [H]

Synonym: Shal_2938

Alternate gene names: 167624852

Gene position: 3570601-3570035 (Counterclockwise)

Preceding gene: 167624853

Following gene: 167624851

Centisome position: 68.31

GC content: 44.27

Gene sequence:

>567_bases
ATGGATAGTTCAGTTATTGGCTTAGTGATAGTGGTTGTTATCATTGTTGCCATCATCATGTTGTACAACGGCATTATTGG
TAAACATAATGCGGTAGACCGTGCATGGGCATCGGTACTGACGCAAGAGCGTCAAAAGAATAAGATTATTCCTATGGTCG
AGCAGTTAGTTGAGCAATATAAACTGCATGAATCAGAAGTACTGACCAAGGTCACAGAACTACGCAGCGCCATTGCAGAA
ATGAGTTCTGGTGTTGATACCGCAAAGCTAGCTGCAGCGGAGCAGCGCACCCATGAGTTAATGCAGGGCCTTAAAGTGAC
GGTAGAGGCTTACCCAGAGCTTAAGGCATCAGAGGTGTATCTGAAGTTGATGGCTGAGATCAGCGAGCAGCAAGAGCAGA
TTGGTGCGGCTATTCGTATTTTCAACGCCAATGTTGAAGATTTCAATAACGCGATTGAAATGTTCCCCGGTTCATTGATC
AATAGCATGTTGGTACGTAAACAGAAAATAAGCAGCTTTAGTGACAGCGAAGCACAAGCGGGGTTTGAGTATCAACCTAA
TTTATAG

Upstream 100 bases:

>100_bases
TTCAAATAAACACATACAAATAAATACTGACTAATAAAGATTTATACAGTTATTCACAGTTAATAAAAGACAGTTAATTA
AAATGTAAAAGGAAACCTAA

Downstream 100 bases:

>100_bases
GCTATTGGTTAACCAATAGATCATTAACCATTAGTTAGGTGATAGCAGTTAATAAGTTGGCAAATAAAACAATATAAAAC
GGGCATTAGCCCGTTTTTTG

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDSSVIGLVIVVVIIVAIIMLYNGIIGKHNAVDRAWASVLTQERQKNKIIPMVEQLVEQYKLHESEVLTKVTELRSAIAE
MSSGVDTAKLAAAEQRTHELMQGLKVTVEAYPELKASEVYLKLMAEISEQQEQIGAAIRIFNANVEDFNNAIEMFPGSLI
NSMLVRKQKISSFSDSEAQAGFEYQPNL

Sequences:

>Translated_188_residues
MDSSVIGLVIVVVIIVAIIMLYNGIIGKHNAVDRAWASVLTQERQKNKIIPMVEQLVEQYKLHESEVLTKVTELRSAIAE
MSSGVDTAKLAAAEQRTHELMQGLKVTVEAYPELKASEVYLKLMAEISEQQEQIGAAIRIFNANVEDFNNAIEMFPGSLI
NSMLVRKQKISSFSDSEAQAGFEYQPNL
>Mature_188_residues
MDSSVIGLVIVVVIIVAIIMLYNGIIGKHNAVDRAWASVLTQERQKNKIIPMVEQLVEQYKLHESEVLTKVTELRSAIAE
MSSGVDTAKLAAAEQRTHELMQGLKVTVEAYPELKASEVYLKLMAEISEQQEQIGAAIRIFNANVEDFNNAIEMFPGSLI
NSMLVRKQKISSFSDSEAQAGFEYQPNL

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20897; Mature: 20897

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSVIGLVIVVVIIVAIIMLYNGIIGKHNAVDRAWASVLTQERQKNKIIPMVEQLVEQY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KLHESEVLTKVTELRSAIAEMSSGVDTAKLAAAEQRTHELMQGLKVTVEAYPELKASEVY
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LKLMAEISEQQEQIGAAIRIFNANVEDFNNAIEMFPGSLINSMLVRKQKISSFSDSEAQA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHC
GFEYQPNL
CCCCCCCC
>Mature Secondary Structure
MDSSVIGLVIVVVIIVAIIMLYNGIIGKHNAVDRAWASVLTQERQKNKIIPMVEQLVEQY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KLHESEVLTKVTELRSAIAEMSSGVDTAKLAAAEQRTHELMQGLKVTVEAYPELKASEVY
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LKLMAEISEQQEQIGAAIRIFNANVEDFNNAIEMFPGSLINSMLVRKQKISSFSDSEAQA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHC
GFEYQPNL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]