Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624841

Identifier: 167624841

GI number: 167624841

Start: 3558463

End: 3560487

Strand: Reverse

Name: 167624841

Synonym: Shal_2927

Alternate gene names: NA

Gene position: 3560487-3558463 (Counterclockwise)

Preceding gene: 167624842

Following gene: 167624840

Centisome position: 68.12

GC content: 47.65

Gene sequence:

>2025_bases
ATGCGTTCAATTAAATCTTTTTCATTAAATCTGATCACTCTTGCGCTATTAGGCACGTGCAGTAGCGCAATGGCGGCCAA
CTTCGGTATCCAAAACGCGAACACGGCAAATATCAAAACCGAGAGCTATCAATGTAAGCGTTGTGTCGAGCCTCAAGGTT
ACACTGGCAGCGTTGGTGTCAGTGTCGGCGCTATCGATGCCGCTGACAACTATGCGATAAACCAGTTTGGTACGGGTAAA
GATGGCGCGATTGCAGGTATCAATAGCGACCTTACCTATCAGCAAAATGGTTATAAAGCTAACGTTCAAGCCCACCAATT
GGGTATGGATAATGGCTTTGTGAGCATGCAAGCGGGTAAGAGCGGTCATTACAAGCTGGATCTGGATTTTCAGACCATTA
CTACTAACCAAGGCAGCAATGCGGCCACGAATCTTTGGCAAAACGATGGCATGCTGACACCGAGTGAGCAGACTCGCGTA
TTGGATCTTGAGCTACAGAGACAGCGCAGCGGCATCGGTTTCGAGTATGACTTTTCAGAGGTGATGGGGCTGGGTCTAAA
CAGTTACGCCCGTTTTGAACGTGAAGATAAAACTGGTCACCGTAGCGCTAGCTTAACGAGCCCACGTCCAACAAACTTTG
CTGAAGCTGTCGATGAAACCACAGATAATTTCAGCGCTGGCGTGGTACTTGATGGCGCTAACTGGTTGTCAGAGCTGAGC
TACAACGGCTCACGTTATGACAATAATATGGGCGATTTAAGCCTGCCATATGCCTATGACGTATACAGCGCGACACCAGA
TAACCAAGCACATCAAGTGTCGCTGTCGGGTCAGTACCGCCTGGACTCTAGTGTATTTAGTGGTCGTGTGGTGACCGGTC
GTATGATCCAAGACCAAGACCTTATCCAGATGAGCGGCAACCCAATTCAAAACTGGGACGGCCAGGTTGATACCTTAAGT
TCACACCTTGCAGCCAGTACGCGAGTCAGTAATCGCTTACGACTAGGCGCCAGCTATGACTATAGCAAGCGTGATAACCG
CTCATCGGCATTTGATTTTGCTCAGTATGAATTCAACTCTATGTCAGGTGCGTTTAAACAAAACACACCGATGGATATCG
AGCGTCAGACTTTCAAAACTAACGCTAGCTACCGCATTGCCAGTGGTTACCGCCTACAAGCGGGTTATGACTATAAGCAA
GTAGAGCGCAGCTATGGTGAGCGTGAACAGACCCGTGATAACGAGTTTTGGAGCAAGCTAAGCATTCGCGCTATCGATAA
GCTGACCCTAGATTTTGGTGTGAGCTATGGCGAGCGCGGTGGCAGTGACTACCAAGCTAATGAGCTCACTAGCGACGAGA
CTGAGTCGTTAATGCGCAAATACAATCTTGCCGATCGTAAGCGCAGTGAAGTTAACGCAAGAGCGAGCTACATGCCGCTT
GAGTGGTTGAGCTTTGATATTAGCACTTACTACGCCAATGATGACTATGATGCCACGGTAATCGGTCTAACTCAGGCAAA
AGACTACGGCTATGACATCAATGTTCATGCCCAGCTTTCAGCGCCGCTATCTGTGTATGCCTTTGCGGGCCAGCAGTGGA
TTGACTCAGATCAAAGCGGTGACCAAGCCTCAGTTTGGCACACAGAGATTAATGATGAGTTTATCAACTTAGGCCTAGGT
GCAACTTATTCAGGCTTAATGGATGGCAGATTGATTTTAGGTAGTGATTACCTATTTGCTAATTCATCTAGCAATACTGG
TGTCAATGGTTACAACTCTGGCAGCGCCAATATCAACAACTATGGCAGCTATTACTCGTACAACCACAGCGTGAGCTTAT
ACGGGCAATATCTGATCTCAGAGCAAATGGCAGTCAAGTTGGCTTACCAGTTTGAACGTTATTTTGATACCGACAGCGCG
ATGGTCACTCCCGATAGCATTCCTGGTTTAATCACCTTGGGTGACCTGAACCACAATTACAACGCCCATCAACTGATGTT
GACCTTCAGCTACAAGCTGAAATAG

Upstream 100 bases:

>100_bases
TCAGTGCTGGTAAGAGTTGCCTAAATTGCCACAGCAAGATCCATGGTTCTAACCATCCTGCTGGCAGCAACTTTGCCCGT
TAAGTCTAGGAGTGACTACT

Downstream 100 bases:

>100_bases
GTCGAGTCAGTCACTAATAAGTTTGAGGAAAACAAGATTATGGAACGTAGAAGTTTCTTAAAAATGAGTGCTGCGCTGGG
CTGCGCAGCAACAGTTACCG

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein MtrB; Outer Membrane Protein MtrB

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MRSIKSFSLNLITLALLGTCSSAMAANFGIQNANTANIKTESYQCKRCVEPQGYTGSVGVSVGAIDAADNYAINQFGTGK
DGAIAGINSDLTYQQNGYKANVQAHQLGMDNGFVSMQAGKSGHYKLDLDFQTITTNQGSNAATNLWQNDGMLTPSEQTRV
LDLELQRQRSGIGFEYDFSEVMGLGLNSYARFEREDKTGHRSASLTSPRPTNFAEAVDETTDNFSAGVVLDGANWLSELS
YNGSRYDNNMGDLSLPYAYDVYSATPDNQAHQVSLSGQYRLDSSVFSGRVVTGRMIQDQDLIQMSGNPIQNWDGQVDTLS
SHLAASTRVSNRLRLGASYDYSKRDNRSSAFDFAQYEFNSMSGAFKQNTPMDIERQTFKTNASYRIASGYRLQAGYDYKQ
VERSYGEREQTRDNEFWSKLSIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYMPL
EWLSFDISTYYANDDYDATVIGLTQAKDYGYDINVHAQLSAPLSVYAFAGQQWIDSDQSGDQASVWHTEINDEFINLGLG
ATYSGLMDGRLILGSDYLFANSSSNTGVNGYNSGSANINNYGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSA
MVTPDSIPGLITLGDLNHNYNAHQLMLTFSYKLK

Sequences:

>Translated_674_residues
MRSIKSFSLNLITLALLGTCSSAMAANFGIQNANTANIKTESYQCKRCVEPQGYTGSVGVSVGAIDAADNYAINQFGTGK
DGAIAGINSDLTYQQNGYKANVQAHQLGMDNGFVSMQAGKSGHYKLDLDFQTITTNQGSNAATNLWQNDGMLTPSEQTRV
LDLELQRQRSGIGFEYDFSEVMGLGLNSYARFEREDKTGHRSASLTSPRPTNFAEAVDETTDNFSAGVVLDGANWLSELS
YNGSRYDNNMGDLSLPYAYDVYSATPDNQAHQVSLSGQYRLDSSVFSGRVVTGRMIQDQDLIQMSGNPIQNWDGQVDTLS
SHLAASTRVSNRLRLGASYDYSKRDNRSSAFDFAQYEFNSMSGAFKQNTPMDIERQTFKTNASYRIASGYRLQAGYDYKQ
VERSYGEREQTRDNEFWSKLSIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYMPL
EWLSFDISTYYANDDYDATVIGLTQAKDYGYDINVHAQLSAPLSVYAFAGQQWIDSDQSGDQASVWHTEINDEFINLGLG
ATYSGLMDGRLILGSDYLFANSSSNTGVNGYNSGSANINNYGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSA
MVTPDSIPGLITLGDLNHNYNAHQLMLTFSYKLK
>Mature_674_residues
MRSIKSFSLNLITLALLGTCSSAMAANFGIQNANTANIKTESYQCKRCVEPQGYTGSVGVSVGAIDAADNYAINQFGTGK
DGAIAGINSDLTYQQNGYKANVQAHQLGMDNGFVSMQAGKSGHYKLDLDFQTITTNQGSNAATNLWQNDGMLTPSEQTRV
LDLELQRQRSGIGFEYDFSEVMGLGLNSYARFEREDKTGHRSASLTSPRPTNFAEAVDETTDNFSAGVVLDGANWLSELS
YNGSRYDNNMGDLSLPYAYDVYSATPDNQAHQVSLSGQYRLDSSVFSGRVVTGRMIQDQDLIQMSGNPIQNWDGQVDTLS
SHLAASTRVSNRLRLGASYDYSKRDNRSSAFDFAQYEFNSMSGAFKQNTPMDIERQTFKTNASYRIASGYRLQAGYDYKQ
VERSYGEREQTRDNEFWSKLSIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYMPL
EWLSFDISTYYANDDYDATVIGLTQAKDYGYDINVHAQLSAPLSVYAFAGQQWIDSDQSGDQASVWHTEINDEFINLGLG
ATYSGLMDGRLILGSDYLFANSSSNTGVNGYNSGSANINNYGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSA
MVTPDSIPGLITLGDLNHNYNAHQLMLTFSYKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74811; Mature: 74811

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIKSFSLNLITLALLGTCSSAMAANFGIQNANTANIKTESYQCKRCVEPQGYTGSVGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCE
SVGAIDAADNYAINQFGTGKDGAIAGINSDLTYQQNGYKANVQAHQLGMDNGFVSMQAGK
EEEEEECCCCEEECCCCCCCCCEEEECCCCCEECCCCEECCCEEEEECCCCCEEEEECCC
SGHYKLDLDFQTITTNQGSNAATNLWQNDGMLTPSEQTRVLDLELQRQRSGIGFEYDFSE
CCCEEEEEEEEEEECCCCCCHHHHEECCCCEECCCCCCEEEEEEEHHHHCCCCEEECHHH
VMGLGLNSYARFEREDKTGHRSASLTSPRPTNFAEAVDETTDNFSAGVVLDGANWLSELS
HHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECHHHHHHHC
YNGSRYDNNMGDLSLPYAYDVYSATPDNQAHQVSLSGQYRLDSSVFSGRVVTGRMIQDQD
CCCCCCCCCCCCEECCEEEEEEECCCCCCCEEEEECCCEEECCHHHCCEEEEEEEECCCC
LIQMSGNPIQNWDGQVDTLSSHLAASTRVSNRLRLGASYDYSKRDNRSSAFDFAQYEFNS
HHEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEHHEECCC
MSGAFKQNTPMDIERQTFKTNASYRIASGYRLQAGYDYKQVERSYGEREQTRDNEFWSKL
CCCCCCCCCCCCCCHHHEECCCCEEEECCEEEECCCCHHHHHHHHCCHHHCCCHHHHHHH
SIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYMPL
HHHHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCH
EWLSFDISTYYANDDYDATVIGLTQAKDYGYDINVHAQLSAPLSVYAFAGQQWIDSDQSG
HHEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCEEEEEECCCHHCCCCCCC
DQASVWHTEINDEFINLGLGATYSGLMDGRLILGSDYLFANSSSNTGVNGYNSGSANINN
CCCEEEEEECCCEEEEECCCCCHHCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCC
YGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSAMVTPDSIPGLITLGDLNHNY
CCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEECCCCCC
NAHQLMLTFSYKLK
CCEEEEEEEEEECC
>Mature Secondary Structure
MRSIKSFSLNLITLALLGTCSSAMAANFGIQNANTANIKTESYQCKRCVEPQGYTGSVGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCE
SVGAIDAADNYAINQFGTGKDGAIAGINSDLTYQQNGYKANVQAHQLGMDNGFVSMQAGK
EEEEEECCCCEEECCCCCCCCCEEEECCCCCEECCCCEECCCEEEEECCCCCEEEEECCC
SGHYKLDLDFQTITTNQGSNAATNLWQNDGMLTPSEQTRVLDLELQRQRSGIGFEYDFSE
CCCEEEEEEEEEEECCCCCCHHHHEECCCCEECCCCCCEEEEEEEHHHHCCCCEEECHHH
VMGLGLNSYARFEREDKTGHRSASLTSPRPTNFAEAVDETTDNFSAGVVLDGANWLSELS
HHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECHHHHHHHC
YNGSRYDNNMGDLSLPYAYDVYSATPDNQAHQVSLSGQYRLDSSVFSGRVVTGRMIQDQD
CCCCCCCCCCCCEECCEEEEEEECCCCCCCEEEEECCCEEECCHHHCCEEEEEEEECCCC
LIQMSGNPIQNWDGQVDTLSSHLAASTRVSNRLRLGASYDYSKRDNRSSAFDFAQYEFNS
HHEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEHHEECCC
MSGAFKQNTPMDIERQTFKTNASYRIASGYRLQAGYDYKQVERSYGEREQTRDNEFWSKL
CCCCCCCCCCCCCCHHHEECCCCEEEECCEEEECCCCHHHHHHHHCCHHHCCCHHHHHHH
SIRAIDKLTLDFGVSYGERGGSDYQANELTSDETESLMRKYNLADRKRSEVNARASYMPL
HHHHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCH
EWLSFDISTYYANDDYDATVIGLTQAKDYGYDINVHAQLSAPLSVYAFAGQQWIDSDQSG
HHEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCEEEEEECCCHHCCCCCCC
DQASVWHTEINDEFINLGLGATYSGLMDGRLILGSDYLFANSSSNTGVNGYNSGSANINN
CCCEEEEEECCCEEEEECCCCCHHCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCC
YGSYYSYNHSVSLYGQYLISEQMAVKLAYQFERYFDTDSAMVTPDSIPGLITLGDLNHNY
CCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEECCCCCC
NAHQLMLTFSYKLK
CCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA