Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624808

Identifier: 167624808

GI number: 167624808

Start: 3518576

End: 3519169

Strand: Reverse

Name: 167624808

Synonym: Shal_2894

Alternate gene names: NA

Gene position: 3519169-3518576 (Counterclockwise)

Preceding gene: 167624809

Following gene: 167624807

Centisome position: 67.33

GC content: 43.43

Gene sequence:

>594_bases
TTGACCATTAAAATAGACTTTGAACAACAAATAAAGCACTGGCTACTCGAAGATGAGTACCGGTTTAATGCTTTGCGCAT
TGTCGAGCAGCTAAAGTTAAACGATTGGATGTTAGCGGCAGGTTTTGTCCGCAATTTAGTTTGGGATAAGTTACATGGCC
TGCAAACAGCGCTCAATGATATCGACCTTATCTATTTTGACTCGAGTGACCTATCCGCCGAGAGGGATACTGCAATCGAA
GCCGAGCTAAATCGAATAGCCCCTATCTACCCATGGTCGGTTAAGAATCAAGCGAGAATGCATCTGCGCAACCAGCATCA
AGCATATACATCAAGTCTTGATGCCATGAGTTATTGGCCTGAAAAGCAGACTGCAGTGGCGGTGAGTAGTCGTTTGCTAA
CATTTAAATCTTTGGCAGCATCAACTGCAATAATAGAACCTGCATCATTGATTTTACATAGTCCGTTTGATCTAGCTTGT
CTGTTTGATCTGTCGCTACAACACAATCCTAAAGCAAAGCGTGCGTTGTTTGAGCGGAGAGTGAAGCAAAAGCGATGGTT
GCAAAGCTACCCTAAGCTACGAGATAATGGTTAG

Upstream 100 bases:

>100_bases
TTTTGTTTATTAAGCCGTTTGAGTTAGGTATTGAGGCGAGTTTTGTATAAGTTAATAACCCTAGCAGTTGAATGTTTAAT
GCTTTGAAAGAGAGTGACTA

Downstream 100 bases:

>100_bases
TGGTGAACTTATGAGCATACAATATTTATTTTGTTGATTTATTGTCTGACACATTAGGGCATTGTTAGAGGGCTATGATA
GCGTTTGCGTGTTAGTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTIKIDFEQQIKHWLLEDEYRFNALRIVEQLKLNDWMLAAGFVRNLVWDKLHGLQTALNDIDLIYFDSSDLSAERDTAIE
AELNRIAPIYPWSVKNQARMHLRNQHQAYTSSLDAMSYWPEKQTAVAVSSRLLTFKSLAASTAIIEPASLILHSPFDLAC
LFDLSLQHNPKAKRALFERRVKQKRWLQSYPKLRDNG

Sequences:

>Translated_197_residues
MTIKIDFEQQIKHWLLEDEYRFNALRIVEQLKLNDWMLAAGFVRNLVWDKLHGLQTALNDIDLIYFDSSDLSAERDTAIE
AELNRIAPIYPWSVKNQARMHLRNQHQAYTSSLDAMSYWPEKQTAVAVSSRLLTFKSLAASTAIIEPASLILHSPFDLAC
LFDLSLQHNPKAKRALFERRVKQKRWLQSYPKLRDNG
>Mature_196_residues
TIKIDFEQQIKHWLLEDEYRFNALRIVEQLKLNDWMLAAGFVRNLVWDKLHGLQTALNDIDLIYFDSSDLSAERDTAIEA
ELNRIAPIYPWSVKNQARMHLRNQHQAYTSSLDAMSYWPEKQTAVAVSSRLLTFKSLAASTAIIEPASLILHSPFDLACL
FDLSLQHNPKAKRALFERRVKQKRWLQSYPKLRDNG

Specific function: Unknown

COG id: COG3575

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22929; Mature: 22797

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKIDFEQQIKHWLLEDEYRFNALRIVEQLKLNDWMLAAGFVRNLVWDKLHGLQTALND
CEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
IDLIYFDSSDLSAERDTAIEAELNRIAPIYPWSVKNQARMHLRNQHQAYTSSLDAMSYWP
CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
EKQTAVAVSSRLLTFKSLAASTAIIEPASLILHSPFDLACLFDLSLQHNPKAKRALFERR
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
VKQKRWLQSYPKLRDNG
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TIKIDFEQQIKHWLLEDEYRFNALRIVEQLKLNDWMLAAGFVRNLVWDKLHGLQTALND
EEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
IDLIYFDSSDLSAERDTAIEAELNRIAPIYPWSVKNQARMHLRNQHQAYTSSLDAMSYWP
CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
EKQTAVAVSSRLLTFKSLAASTAIIEPASLILHSPFDLACLFDLSLQHNPKAKRALFERR
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
VKQKRWLQSYPKLRDNG
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA