Click here to switch to the map view.

The map label for this gene is 167624807

Identifier: 167624807

GI number: 167624807

Start: 3517709

End: 3518431

Strand: Reverse

Name: 167624807

Synonym: Shal_2893

Alternate gene names: NA

Gene position: 3518431-3517709 (Counterclockwise)

Preceding gene: 167624808

Following gene: 167624804

Centisome position: 67.31

GC content: 46.89

Gene sequence:

>723_bases
ATGGAACTTTACCTTGATGCGATTAAAGAGATCAAAGAGTTAGCAAACGCAGAGGAGATCCATCGGGTTGATGATGTATC
GATATATCTGGAGCGCTTTACAGATCTTGATCTAATCGCCACCGGTATCTACGCCGAGGTGTACGAAGTCCCCGGAGAGC
CAGATAAAGTCATCAAGCTGTGTAACAGTAAGATAGATGGTTACTACCTATTTGCCCGCTGGTGCATGCGCCCAGAAAAT
CAAGATAACCCCCATGTTCCAACTATCCATCGTGAAGATACCGTCGAGTTGAGCAGCGGTCGAGTGGTGCGTTTTTACGT
AATGGAGCGTCTTGAAGACATCACCGATGACGGTACAGAGCCCACTCGTCCAAGCCATTTTCATGATGATGACTTTGGCA
AACTCTGGGGCACCTTGCGTACCATGACCCTGCCATTTGCCGATCCACAGAAGCCTTTCACCGATGAGGTTTCAAGTGTT
GATGAGTTTGTCGAGCAGATCCAAGAGCCACGAGCGCATTTTTATATGAGCTCAGATGAGCGCAAGCCAGTGGTAATTGA
TGATGAGATTATTGATGAGCATGAAGAGCTGCTAAAAACGCTGTTTAAAGTGCTTAGCTTTATCGATGATCACGGAGTGA
TGGACTTGCATGGCGGTAACTATATGCTCCGAGGTGACACAATAGTGATTACTGACCCCATCTCTCATAAATACGCCGGT
TGA

Upstream 100 bases:

>100_bases
TCTGACACATTAGGGCATTGTTAGAGGGCTATGATAGCGTTTGCGTGTTAGTCGTAGCCGTTGTTCTAAATTTTTCTTGT
TGTAAATGGTGGCTTAATCG

Downstream 100 bases:

>100_bases
TACGTCCCTAACTCGTTATCTAATTCATAAAAAAGGGCTGATTATAAAGCCCTTTTTTATGTCGAACTGGCATTATTTTG
ACTTTAAAATCTCTGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MELYLDAIKEIKELANAEEIHRVDDVSIYLERFTDLDLIATGIYAEVYEVPGEPDKVIKLCNSKIDGYYLFARWCMRPEN
QDNPHVPTIHREDTVELSSGRVVRFYVMERLEDITDDGTEPTRPSHFHDDDFGKLWGTLRTMTLPFADPQKPFTDEVSSV
DEFVEQIQEPRAHFYMSSDERKPVVIDDEIIDEHEELLKTLFKVLSFIDDHGVMDLHGGNYMLRGDTIVITDPISHKYAG

Sequences:

>Translated_240_residues
MELYLDAIKEIKELANAEEIHRVDDVSIYLERFTDLDLIATGIYAEVYEVPGEPDKVIKLCNSKIDGYYLFARWCMRPEN
QDNPHVPTIHREDTVELSSGRVVRFYVMERLEDITDDGTEPTRPSHFHDDDFGKLWGTLRTMTLPFADPQKPFTDEVSSV
DEFVEQIQEPRAHFYMSSDERKPVVIDDEIIDEHEELLKTLFKVLSFIDDHGVMDLHGGNYMLRGDTIVITDPISHKYAG
>Mature_240_residues
MELYLDAIKEIKELANAEEIHRVDDVSIYLERFTDLDLIATGIYAEVYEVPGEPDKVIKLCNSKIDGYYLFARWCMRPEN
QDNPHVPTIHREDTVELSSGRVVRFYVMERLEDITDDGTEPTRPSHFHDDDFGKLWGTLRTMTLPFADPQKPFTDEVSSV
DEFVEQIQEPRAHFYMSSDERKPVVIDDEIIDEHEELLKTLFKVLSFIDDHGVMDLHGGNYMLRGDTIVITDPISHKYAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27798; Mature: 27798

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYLDAIKEIKELANAEEIHRVDDVSIYLERFTDLDLIATGIYAEVYEVPGEPDKVIKL
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
CNSKIDGYYLFARWCMRPENQDNPHVPTIHREDTVELSSGRVVRFYVMERLEDITDDGTE
HCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEHHHHHHHHHHHCCCCCC
PTRPSHFHDDDFGKLWGTLRTMTLPFADPQKPFTDEVSSVDEFVEQIQEPRAHFYMSSDE
CCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCC
RKPVVIDDEIIDEHEELLKTLFKVLSFIDDHGVMDLHGGNYMLRGDTIVITDPISHKYAG
CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEEECCCCCCCCC
>Mature Secondary Structure
MELYLDAIKEIKELANAEEIHRVDDVSIYLERFTDLDLIATGIYAEVYEVPGEPDKVIKL
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
CNSKIDGYYLFARWCMRPENQDNPHVPTIHREDTVELSSGRVVRFYVMERLEDITDDGTE
HCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEHHHHHHHHHHHCCCCCC
PTRPSHFHDDDFGKLWGTLRTMTLPFADPQKPFTDEVSSVDEFVEQIQEPRAHFYMSSDE
CCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCC
RKPVVIDDEIIDEHEELLKTLFKVLSFIDDHGVMDLHGGNYMLRGDTIVITDPISHKYAG
CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA