Click here to switch to the map view.

The map label for this gene is uspE [H]

Identifier: 167624773

GI number: 167624773

Start: 3474508

End: 3475455

Strand: Reverse

Name: uspE [H]

Synonym: Shal_2857

Alternate gene names: 167624773

Gene position: 3475455-3474508 (Counterclockwise)

Preceding gene: 167624774

Following gene: 167624772

Centisome position: 66.49

GC content: 43.88

Gene sequence:

>948_bases
ATGAAAAGCTTCAAGAATATATTATTTGTTAGTCAGGGATTGCCTAGTGACAGTGACTCCATAGGGCAAGCGCTGCGACT
GTCTCAGGCTAATCATGCACGGGTAAAAGGCTTGATTGTTTGTCCTGCGCTCTCACCTAGCTCACACAAAATAAACGCTC
AATATCAAGACATCTATGAAAATGCGCTGCGACAAACAGTCAATCAACAGATAGATAAAAGCAGGCAGGAAAATCATATT
GCCGAGGCGGATGCTCCCTTGCCTCTGGAAGTCTTTAGTGGCGAAAAACCGGCGGTAAACATCATAAAAAATATCTTACA
GCATAAGCACGATCTGTTGATTAAAGATGCTGAACCTATGGCTGGAACGGGTGAAGGGTTCAAGGCTATCGACATGACAT
TACTGCGCAAATGCCCGTGTCCTGTTTGGCTTAATCGTTTAGTCCATCAACCGTTGGACAAACGACAGGTTGCAGTTGCG
ATAGATCCCATTAGCACGAGCCTTGAAGAAAATGCACTCTCAATTAGAATGTTGCAGTTAGCTCGCGATACTGCCAACAG
GTGTGACTACCGCCTGCATGTTTTATCTTGTTGGGAATATAATCTTGAAAGTTACTTGAGAAACAGTCTCTGGATTAAAA
TTGACCAAGAGGAACTAAACGCAGAGCTTGAAAGTTTAAGAGTCAGTCATCGCAAAGCATTAGACAGCCTCATTGAACAA
TCTGGCATTGGTGGTGACATTATTATTCACCATCTGCAAGGCGCTGCGGATGTTCAAATCCCTGAGTTCGTCAACGAGAA
AGAGATCGATATCTTAGTTATGGGCACCTTGGCAAGGACGGGTATTCCAGGCTTTGTTATCGGCAATACCGCAGAGAATA
TCTTGCAATCGATTAAGTGCTCGTTAGTGGCGTTAAAGCCTGAAGGCTTTGAGTCACCGATAAGTTAA

Upstream 100 bases:

>100_bases
GTTGCGTTTAGCAATGTTTTTCGTCGCTAGCAATAAACAAAACGAGACATTTTAAAGCTCAACGCCAGCCCTCAAGGTGC
TCCATATCACGGAGGTAGAG

Downstream 100 bases:

>100_bases
CGGATAACACTATTGATATAGCTTCGCTCTTCAAAATTGCCAATATTCAAAAGTAACTGATATTCAAACAAATTACCGGA
TGCTTTAGCGTTCGGTAATG

Product: UspA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKSFKNILFVSQGLPSDSDSIGQALRLSQANHARVKGLIVCPALSPSSHKINAQYQDIYENALRQTVNQQIDKSRQENHI
AEADAPLPLEVFSGEKPAVNIIKNILQHKHDLLIKDAEPMAGTGEGFKAIDMTLLRKCPCPVWLNRLVHQPLDKRQVAVA
IDPISTSLEENALSIRMLQLARDTANRCDYRLHVLSCWEYNLESYLRNSLWIKIDQEELNAELESLRVSHRKALDSLIEQ
SGIGGDIIIHHLQGAADVQIPEFVNEKEIDILVMGTLARTGIPGFVIGNTAENILQSIKCSLVALKPEGFESPIS

Sequences:

>Translated_315_residues
MKSFKNILFVSQGLPSDSDSIGQALRLSQANHARVKGLIVCPALSPSSHKINAQYQDIYENALRQTVNQQIDKSRQENHI
AEADAPLPLEVFSGEKPAVNIIKNILQHKHDLLIKDAEPMAGTGEGFKAIDMTLLRKCPCPVWLNRLVHQPLDKRQVAVA
IDPISTSLEENALSIRMLQLARDTANRCDYRLHVLSCWEYNLESYLRNSLWIKIDQEELNAELESLRVSHRKALDSLIEQ
SGIGGDIIIHHLQGAADVQIPEFVNEKEIDILVMGTLARTGIPGFVIGNTAENILQSIKCSLVALKPEGFESPIS
>Mature_315_residues
MKSFKNILFVSQGLPSDSDSIGQALRLSQANHARVKGLIVCPALSPSSHKINAQYQDIYENALRQTVNQQIDKSRQENHI
AEADAPLPLEVFSGEKPAVNIIKNILQHKHDLLIKDAEPMAGTGEGFKAIDMTLLRKCPCPVWLNRLVHQPLDKRQVAVA
IDPISTSLEENALSIRMLQLARDTANRCDYRLHVLSCWEYNLESYLRNSLWIKIDQEELNAELESLRVSHRKALDSLIEQ
SGIGGDIIIHHLQGAADVQIPEFVNEKEIDILVMGTLARTGIPGFVIGNTAENILQSIKCSLVALKPEGFESPIS

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=325, Percent_Identity=24.9230769230769, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 35034; Mature: 35034

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFKNILFVSQGLPSDSDSIGQALRLSQANHARVKGLIVCPALSPSSHKINAQYQDIYE
CCCHHHHEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHH
NALRQTVNQQIDKSRQENHIAEADAPLPLEVFSGEKPAVNIIKNILQHKHDLLIKDAEPM
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEHCCCCCCCHHHHHHHHHHHHHHEEEECCCCC
AGTGEGFKAIDMTLLRKCPCPVWLNRLVHQPLDKRQVAVAIDPISTSLEENALSIRMLQL
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
ARDTANRCDYRLHVLSCWEYNLESYLRNSLWIKIDQEELNAELESLRVSHRKALDSLIEQ
HHHHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
SGIGGDIIIHHLQGAADVQIPEFVNEKEIDILVMGTLARTGIPGFVIGNTAENILQSIKC
CCCCCCEEEEECCCCCCCCCHHHCCCCCCEEEEEECHHHCCCCCEEECCCHHHHHHHHHH
SLVALKPEGFESPIS
EEEEECCCCCCCCCC
>Mature Secondary Structure
MKSFKNILFVSQGLPSDSDSIGQALRLSQANHARVKGLIVCPALSPSSHKINAQYQDIYE
CCCHHHHEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHH
NALRQTVNQQIDKSRQENHIAEADAPLPLEVFSGEKPAVNIIKNILQHKHDLLIKDAEPM
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEHCCCCCCCHHHHHHHHHHHHHHEEEECCCCC
AGTGEGFKAIDMTLLRKCPCPVWLNRLVHQPLDKRQVAVAIDPISTSLEENALSIRMLQL
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
ARDTANRCDYRLHVLSCWEYNLESYLRNSLWIKIDQEELNAELESLRVSHRKALDSLIEQ
HHHHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
SGIGGDIIIHHLQGAADVQIPEFVNEKEIDILVMGTLARTGIPGFVIGNTAENILQSIKC
CCCCCCEEEEECCCCCCCCCHHHCCCCCCEEEEEECHHHCCCCCEEECCCHHHHHHHHHH
SLVALKPEGFESPIS
EEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]