Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624733

Identifier: 167624733

GI number: 167624733

Start: 3424166

End: 3424609

Strand: Reverse

Name: 167624733

Synonym: Shal_2816

Alternate gene names: NA

Gene position: 3424609-3424166 (Counterclockwise)

Preceding gene: 167624734

Following gene: 167624732

Centisome position: 65.52

GC content: 42.79

Gene sequence:

>444_bases
ATGAAGGTATTGTCACTATTTTTAAGCCAGGTGTTGTTAGCCTTTTTTATCGTTTGCTTGCCTTTGAAAGCGGCAGATAA
TCCCTTTATTGGCAGCTGGAAGTTGGTTTCTGGTAAGTATCTAGACGGTAAAGGTCAGTGGGTTGAATATAGCGACCTAA
AACTCAGCGCGATTAAAGTCATCTCCGCTAACCATTTTAGTTTTACTACGATGAAAAATGTGGGTAGTGACGCTAAGCCA
ACTTTAGAGTTTTGGGCCGCCGCAACGGGTGATTATGAATATACCGCGACCGATTATATCGAATATCCACACTTAAACTC
ATTTGGTGTTAATGCGGGGGAGTCTTTTACTTTCACCTATACCATAGAAGGTAAGGAGTGGCATACCCAGCGCACCGAAG
ATGGTGTGTTAAAAGAGCAGGAACATTGGACTAAGCTGGACTAG

Upstream 100 bases:

>100_bases
GTTGTACTGACTTGTTATGTAAGTGAATAGGCTGATAAGTGATAAGTGATAAGTGATAAGTGATAAGTGATAAGTGACTC
ATTAAACTCAAGGAGGCGTT

Downstream 100 bases:

>100_bases
ATTGTAGTAAACCTAACGTTAACTTTTAAGGGGATATGATGAGCAAGAAAGCGGATAGAGATATCGAAAAGGGTTATAGC
AATGCTGAGTTTGCCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKVLSLFLSQVLLAFFIVCLPLKAADNPFIGSWKLVSGKYLDGKGQWVEYSDLKLSAIKVISANHFSFTTMKNVGSDAKP
TLEFWAAATGDYEYTATDYIEYPHLNSFGVNAGESFTFTYTIEGKEWHTQRTEDGVLKEQEHWTKLD

Sequences:

>Translated_147_residues
MKVLSLFLSQVLLAFFIVCLPLKAADNPFIGSWKLVSGKYLDGKGQWVEYSDLKLSAIKVISANHFSFTTMKNVGSDAKP
TLEFWAAATGDYEYTATDYIEYPHLNSFGVNAGESFTFTYTIEGKEWHTQRTEDGVLKEQEHWTKLD
>Mature_147_residues
MKVLSLFLSQVLLAFFIVCLPLKAADNPFIGSWKLVSGKYLDGKGQWVEYSDLKLSAIKVISANHFSFTTMKNVGSDAKP
TLEFWAAATGDYEYTATDYIEYPHLNSFGVNAGESFTFTYTIEGKEWHTQRTEDGVLKEQEHWTKLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16647; Mature: 16647

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLSLFLSQVLLAFFIVCLPLKAADNPFIGSWKLVSGKYLDGKGQWVEYSDLKLSAIKV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEECCCCCEEEECCCEEEEEEE
ISANHFSFTTMKNVGSDAKPTLEFWAAATGDYEYTATDYIEYPHLNSFGVNAGESFTFTY
EECCCEEEEEHHHCCCCCCCCEEEEEECCCCCEEEEECEECCCCCCCCCCCCCCEEEEEE
TIEGKEWHTQRTEDGVLKEQEHWTKLD
EECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVLSLFLSQVLLAFFIVCLPLKAADNPFIGSWKLVSGKYLDGKGQWVEYSDLKLSAIKV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEECCCCCEEEECCCEEEEEEE
ISANHFSFTTMKNVGSDAKPTLEFWAAATGDYEYTATDYIEYPHLNSFGVNAGESFTFTY
EECCCEEEEEHHHCCCCCCCCEEEEEECCCCCEEEEECEECCCCCCCCCCCCCCEEEEEE
TIEGKEWHTQRTEDGVLKEQEHWTKLD
EECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA