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The map label for this gene is ycjF [C]

Identifier: 167624670

GI number: 167624670

Start: 3340706

End: 3341821

Strand: Reverse

Name: ycjF [C]

Synonym: Shal_2752

Alternate gene names: 167624670

Gene position: 3341821-3340706 (Counterclockwise)

Preceding gene: 167624671

Following gene: 167624669

Centisome position: 63.93

GC content: 45.88

Gene sequence:

>1116_bases
ATGTCACAAGGTGAGAGTTCCATTAAAAAGCAGCAACGATTCGACAATAATGACAGCCATAGCAACGATACCGATGTGAA
GCTAACTGCGGCTAGTAACTTTGACCCACAGGTTGAATTTATCGAAACAGACAGTCTTTCTGAGCTTGAGCTTGAAACCA
TAGTCGATGACCGTTTATCCGGTATTGATCCATTAGAGCAAGAAAGTGCAAACGCGCCACGCTTAACGCGTAAACGGGCT
TGGTTGGGCAAGTTATGTCTAGCTGGCATCGCTGTGGTCGTGGTTGTGGAAGCCGTTCTTAGCCTACAGGCTGCTTTTTT
ACAGAGTAGTTGGTTATTTAGCCTTTATGCCAGCGTCACAGGGCTAGTAACACTGTGGGCAGGTAAAATGACTTTTGCTG
AATGGCGTAAGCTAAAAGCCTTAAAACATATCGAAGACTCCCAAAGTGTGGGTAACCGTTTAGTGCACAGCATGCAGATG
GGAGAGGCCGATCCCTTTATTGATGAGATCATTGAAAAACTGCCTAAAACGGCGCAAGTTAGCCGCTATCTTCAAAGTGC
TACAGCTGAACATAACGACGCTGAAAAGCTCAGTTTGTTCGATTCTCTAGTATTAACCGAGCGTGATTTAGTGGCTAAAA
AAATCGTGCGCCGTTTTGCTCAGGAGTCTGCCTTATTACTGGCAGCCAGCCCATTAGCTATGTTAGATATGGCGATTATT
CTTTGGCGCAACCAGAGCATGATTAATAAACTTGCCGCCTGTTATGGTGTGGAGCTGGGTTATTGGAGCCGAATAAAACT
TATTCGTAGCATTATTGGCAATATTATCTACGCCGGTTCGAGCGAGATTATTACCGACTTAGGAACCCAATTATTGTCGG
TAGAGATGTCAGGCAAACTATCAGCGAGGCTGGCCCAGGGCTTAGGTGGCGGACTGTTAACGGCAAGGCTCGGCTATCAA
GCGATGGCATTATGTCGTCCGCTTGAGTTTACTGCCCAGTCTAAGCCTAAGCTTTCTGGGATCCATAAAGAGCTGCTACT
CAGTTTAAAAGAGCTATCGGCGAGCGTACTGTCTAAAACCGTTAAAGCGGAGAAGAGTCAAGTCCATAAAGACTAG

Upstream 100 bases:

>100_bases
AGCACATACGTTTAGATCACGTATTGCAGTATTTACTCGGCGATAAATTGAAATAAAGTTAGATAAGATTTTAGGCAAAA
CGTTAGGCGAGTGAGAGTGT

Downstream 100 bases:

>100_bases
TCTTGCATATTCCCCGTACTAAAGGCTTCAGCGCTAACTTATAAGCATTTATATGTTAGCCACTCGCGTAAAAGCATCCA
CTCATATCAGTCTCCTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSQGESSIKKQQRFDNNDSHSNDTDVKLTAASNFDPQVEFIETDSLSELELETIVDDRLSGIDPLEQESANAPRLTRKRA
WLGKLCLAGIAVVVVVEAVLSLQAAFLQSSWLFSLYASVTGLVTLWAGKMTFAEWRKLKALKHIEDSQSVGNRLVHSMQM
GEADPFIDEIIEKLPKTAQVSRYLQSATAEHNDAEKLSLFDSLVLTERDLVAKKIVRRFAQESALLLAASPLAMLDMAII
LWRNQSMINKLAACYGVELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLSARLAQGLGGGLLTARLGYQ
AMALCRPLEFTAQSKPKLSGIHKELLLSLKELSASVLSKTVKAEKSQVHKD

Sequences:

>Translated_371_residues
MSQGESSIKKQQRFDNNDSHSNDTDVKLTAASNFDPQVEFIETDSLSELELETIVDDRLSGIDPLEQESANAPRLTRKRA
WLGKLCLAGIAVVVVVEAVLSLQAAFLQSSWLFSLYASVTGLVTLWAGKMTFAEWRKLKALKHIEDSQSVGNRLVHSMQM
GEADPFIDEIIEKLPKTAQVSRYLQSATAEHNDAEKLSLFDSLVLTERDLVAKKIVRRFAQESALLLAASPLAMLDMAII
LWRNQSMINKLAACYGVELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLSARLAQGLGGGLLTARLGYQ
AMALCRPLEFTAQSKPKLSGIHKELLLSLKELSASVLSKTVKAEKSQVHKD
>Mature_370_residues
SQGESSIKKQQRFDNNDSHSNDTDVKLTAASNFDPQVEFIETDSLSELELETIVDDRLSGIDPLEQESANAPRLTRKRAW
LGKLCLAGIAVVVVVEAVLSLQAAFLQSSWLFSLYASVTGLVTLWAGKMTFAEWRKLKALKHIEDSQSVGNRLVHSMQMG
EADPFIDEIIEKLPKTAQVSRYLQSATAEHNDAEKLSLFDSLVLTERDLVAKKIVRRFAQESALLLAASPLAMLDMAIIL
WRNQSMINKLAACYGVELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKLSARLAQGLGGGLLTARLGYQA
MALCRPLEFTAQSKPKLSGIHKELLLSLKELSASVLSKTVKAEKSQVHKD

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=355, Percent_Identity=32.9577464788732, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 40849; Mature: 40717

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGESSIKKQQRFDNNDSHSNDTDVKLTAASNFDPQVEFIETDSLSELELETIVDDRLS
CCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHC
GIDPLEQESANAPRLTRKRAWLGKLCLAGIAVVVVVEAVLSLQAAFLQSSWLFSLYASVT
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVTLWAGKMTFAEWRKLKALKHIEDSQSVGNRLVHSMQMGEADPFIDEIIEKLPKTAQV
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
SRYLQSATAEHNDAEKLSLFDSLVLTERDLVAKKIVRRFAQESALLLAASPLAMLDMAII
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LWRNQSMINKLAACYGVELGYWSRIKLIRSIIGNIIYAGSSEIITDLGTQLLSVEMSGKL
HHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCHH
SARLAQGLGGGLLTARLGYQAMALCRPLEFTAQSKPKLSGIHKELLLSLKELSASVLSKT
HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VKAEKSQVHKD
HHHHHHHCCCC
>Mature Secondary Structure 
SQGESSIKKQQRFDNNDSHSNDTDVKLTAASNFDPQVEFIETDSLSELELETIVDDRLS
CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHC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HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]