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The map label for this gene is ydiF [H]

Identifier: 167624659

GI number: 167624659

Start: 3325354

End: 3326946

Strand: Reverse

Name: ydiF [H]

Synonym: Shal_2741

Alternate gene names: 167624659

Gene position: 3326946-3325354 (Counterclockwise)

Preceding gene: 167624660

Following gene: 167624658

Centisome position: 63.65

GC content: 44.38

Gene sequence:

>1593_bases
ATGAAAGTAAAAATACTGACAGCAACTCAGGCAGCGTCTTTGATTAAAGACGAAGATAAAGTAATTCTAGGGGGCTTTAT
TGGTGCCGTAGTGCCTGAAGCAATCGAAAAAGCGATTGGTGAACGATTTCTAAGTTGTGGGCATCCTAAAGCACTAGAAC
TTTATTTCACAGCAGGCCAAGGAGATGGAGCGACCAAAGCTGCTAACCATATGGCATATCCTGGTATGGTAAAAATGGCC
ATGGGCGGACATTGGGGGCTCATTCCACGTCTGCAAAAGTTGGCTAATGAAAACCAGATCCAAGCCTACAACTTTCCGCA
AGGGGTCATAGCGCAACTGTTACGTGACTCTGCAGCGGGTAAGCCCGGCACACTTTCTCATGTTGGTATTGGCACTTTTA
TCGATCCGCGTATTGATGGGGGCAAGATTAACAGTGTGACTAAAGAAGATCGCGTCTCAGTAATAAACATAGATAACAAC
GACTATCTATTTTATAAGCGTATGGATGCCAATGTTGCACTGCTTCGAGGCACCACTGCTGATGAAAATGGCAATATCAC
CATGGAGGACGAGTGCCTATTCTTAGAGAACTTAGCCGCTGCTCAGCTAGTCACTAATATGGGTGGCACCGTCATTGTGC
AGGTAAAAAGAATTGTAAAAGTGGGGACTCTAGACCCACAGCAAGTACGTATTCCGGGTATTTTTGTTAATGCCGTCGTG
GTGGTCTCCGAAGAGGAACACCATATGCAGACCTTCGCTGAGAATATGAATCCTGCTTACTGCGGACGTGGTAAACAAGG
CGCTGACAAGCAGATCTCAAGAAAACTTGACGCTAAGAAAATTATCGCTCGCCGAGCTGCAATGGAATTAACAAGGGGCG
CCATTCTCAATTACGGTATTGGTGCGCCAGAGGTGATAGCCAGTGTAACGGATGAAGAAGGGATCACCGACCAAATGATT
GCCACTGTTGAGCCTGGTGCCATTGGTGGCACGCCTGCGGGCGGTTTAAGCTTTGGTGCCTCAGCATTCCCTGAAGCGAT
TATTACTCAAGATCAAATGTTTGATTTTTACGATGGTGGTGGAATTGATCAAGCATTTCTTGGTTTAGCAGAGTGTGATG
AAAATGGTGACCTAAATGTATCCAAATTTGGCCCTAAAATAGCGGGCTGTGGTGGCTTCATCGATATTACCCAAAATGCT
AAGCAAGTTTTTTTCTGCGGGACTTTTACAGCGGGGAAACTACAAATAGAGACGGGTAATGGTGAGCTGGAAATTATTGA
AGATGGCCACATTTGTAAGTTAATTCGTAAAGTTGCTCAGATTACTTTTGCTGCCAATATCGCAAGAAAAAATGGCAAAA
AAGTCCTCTATATCACAGAGAGGGCTGTTTTTAGGCTAGCAGATAAAGGTATTGAGCTTATTGAAATAGCGCCTGGTGTC
GATCTTAATAGAGACATCTTGCAAAAAATGGAGTTCATGCCGGCTATCAGTGCCAATTTAAAAATGATGGATAGACGAAT
TTTCACTGAGGCGCCAATGGGGTTATCACTTGATGAAAATAGCTTTAGCTCACAAGTTGACTCTGCAGCGTAA

Upstream 100 bases:

>100_bases
TCTATTTTCTCAGTAATCACAACACCTTAAACTTCAGTTATTACCTCAGCGTCACATCGGCTATTGGTTACCCCATTATT
CAGTTTTGAAGGAAGATGTT

Downstream 100 bases:

>100_bases
ACATTAAGGCATAAATAGGTAAGTAGTATGAGCTATACAATTGGGCAGATAAATATTGGCCAACAAGCCAGTTTTGAAAA
AACCATCACTGAGACCGATG

Product: coenzyme A transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MKVKILTATQAASLIKDEDKVILGGFIGAVVPEAIEKAIGERFLSCGHPKALELYFTAGQGDGATKAANHMAYPGMVKMA
MGGHWGLIPRLQKLANENQIQAYNFPQGVIAQLLRDSAAGKPGTLSHVGIGTFIDPRIDGGKINSVTKEDRVSVINIDNN
DYLFYKRMDANVALLRGTTADENGNITMEDECLFLENLAAAQLVTNMGGTVIVQVKRIVKVGTLDPQQVRIPGIFVNAVV
VVSEEEHHMQTFAENMNPAYCGRGKQGADKQISRKLDAKKIIARRAAMELTRGAILNYGIGAPEVIASVTDEEGITDQMI
ATVEPGAIGGTPAGGLSFGASAFPEAIITQDQMFDFYDGGGIDQAFLGLAECDENGDLNVSKFGPKIAGCGGFIDITQNA
KQVFFCGTFTAGKLQIETGNGELEIIEDGHICKLIRKVAQITFAANIARKNGKKVLYITERAVFRLADKGIELIEIAPGV
DLNRDILQKMEFMPAISANLKMMDRRIFTEAPMGLSLDENSFSSQVDSAA

Sequences:

>Translated_530_residues
MKVKILTATQAASLIKDEDKVILGGFIGAVVPEAIEKAIGERFLSCGHPKALELYFTAGQGDGATKAANHMAYPGMVKMA
MGGHWGLIPRLQKLANENQIQAYNFPQGVIAQLLRDSAAGKPGTLSHVGIGTFIDPRIDGGKINSVTKEDRVSVINIDNN
DYLFYKRMDANVALLRGTTADENGNITMEDECLFLENLAAAQLVTNMGGTVIVQVKRIVKVGTLDPQQVRIPGIFVNAVV
VVSEEEHHMQTFAENMNPAYCGRGKQGADKQISRKLDAKKIIARRAAMELTRGAILNYGIGAPEVIASVTDEEGITDQMI
ATVEPGAIGGTPAGGLSFGASAFPEAIITQDQMFDFYDGGGIDQAFLGLAECDENGDLNVSKFGPKIAGCGGFIDITQNA
KQVFFCGTFTAGKLQIETGNGELEIIEDGHICKLIRKVAQITFAANIARKNGKKVLYITERAVFRLADKGIELIEIAPGV
DLNRDILQKMEFMPAISANLKMMDRRIFTEAPMGLSLDENSFSSQVDSAA
>Mature_530_residues
MKVKILTATQAASLIKDEDKVILGGFIGAVVPEAIEKAIGERFLSCGHPKALELYFTAGQGDGATKAANHMAYPGMVKMA
MGGHWGLIPRLQKLANENQIQAYNFPQGVIAQLLRDSAAGKPGTLSHVGIGTFIDPRIDGGKINSVTKEDRVSVINIDNN
DYLFYKRMDANVALLRGTTADENGNITMEDECLFLENLAAAQLVTNMGGTVIVQVKRIVKVGTLDPQQVRIPGIFVNAVV
VVSEEEHHMQTFAENMNPAYCGRGKQGADKQISRKLDAKKIIARRAAMELTRGAILNYGIGAPEVIASVTDEEGITDQMI
ATVEPGAIGGTPAGGLSFGASAFPEAIITQDQMFDFYDGGGIDQAFLGLAECDENGDLNVSKFGPKIAGCGGFIDITQNA
KQVFFCGTFTAGKLQIETGNGELEIIEDGHICKLIRKVAQITFAANIARKNGKKVLYITERAVFRLADKGIELIEIAPGV
DLNRDILQKMEFMPAISANLKMMDRRIFTEAPMGLSLDENSFSSQVDSAA

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=428, Percent_Identity=26.1682242990654, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI11545841, Length=438, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1787985, Length=519, Percent_Identity=44.3159922928709, Blast_Score=447, Evalue=1e-127,
Organism=Escherichia coli, GI1788552, Length=221, Percent_Identity=31.2217194570136, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788551, Length=246, Percent_Identity=21.5447154471545, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17531517, Length=530, Percent_Identity=27.5471698113208, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21358325, Length=526, Percent_Identity=23.1939163498099, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24655794, Length=526, Percent_Identity=23.1939163498099, Blast_Score=76, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 56980; Mature: 56980

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKILTATQAASLIKDEDKVILGGFIGAVVPEAIEKAIGERFLSCGHPKALELYFTAGQ
CEEEEEEHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
GDGATKAANHMAYPGMVKMAMGGHWGLIPRLQKLANENQIQAYNFPQGVIAQLLRDSAAG
CCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCC
KPGTLSHVGIGTFIDPRIDGGKINSVTKEDRVSVINIDNNDYLFYKRMDANVALLRGTTA
CCCCEEEECCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCC
DENGNITMEDECLFLENLAAAQLVTNMGGTVIVQVKRIVKVGTLDPQQVRIPGIFVNAVV
CCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCCCCCCCEEECEEEEEEEE
VVSEEEHHMQTFAENMNPAYCGRGKQGADKQISRKLDAKKIIARRAAMELTRGAILNYGI
EEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCC
GAPEVIASVTDEEGITDQMIATVEPGAIGGTPAGGLSFGASAFPEAIITQDQMFDFYDGG
CCHHHHHHCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCHHCCHHHHCHHHHEECCCCC
GIDQAFLGLAECDENGDLNVSKFGPKIAGCGGFIDITQNAKQVFFCGTFTAGKLQIETGN
CCCHHHHHHHHCCCCCCEEHHHCCCCEECCCCEEEECCCCCEEEEEEEECCCEEEEEECC
GELEIIEDGHICKLIRKVAQITFAANIARKNGKKVLYITERAVFRLADKGIELIEIAPGV
CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCEEEEECCCC
DLNRDILQKMEFMPAISANLKMMDRRIFTEAPMGLSLDENSFSSQVDSAA
CCCHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCEECCCCHHHHHCCCC
>Mature Secondary Structure
MKVKILTATQAASLIKDEDKVILGGFIGAVVPEAIEKAIGERFLSCGHPKALELYFTAGQ
CEEEEEEHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
GDGATKAANHMAYPGMVKMAMGGHWGLIPRLQKLANENQIQAYNFPQGVIAQLLRDSAAG
CCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCC
KPGTLSHVGIGTFIDPRIDGGKINSVTKEDRVSVINIDNNDYLFYKRMDANVALLRGTTA
CCCCEEEECCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCC
DENGNITMEDECLFLENLAAAQLVTNMGGTVIVQVKRIVKVGTLDPQQVRIPGIFVNAVV
CCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCCCCCCCEEECEEEEEEEE
VVSEEEHHMQTFAENMNPAYCGRGKQGADKQISRKLDAKKIIARRAAMELTRGAILNYGI
EEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCC
GAPEVIASVTDEEGITDQMIATVEPGAIGGTPAGGLSFGASAFPEAIITQDQMFDFYDGG
CCHHHHHHCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCHHCCHHHHCHHHHEECCCCC
GIDQAFLGLAECDENGDLNVSKFGPKIAGCGGFIDITQNAKQVFFCGTFTAGKLQIETGN
CCCHHHHHHHHCCCCCCEEHHHCCCCEECCCCEEEECCCCCEEEEEEEECCCEEEEEECC
GELEIIEDGHICKLIRKVAQITFAANIARKNGKKVLYITERAVFRLADKGIELIEIAPGV
CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCEEEEECCCC
DLNRDILQKMEFMPAISANLKMMDRRIFTEAPMGLSLDENSFSSQVDSAA
CCCHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCEECCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]